RNA–Protein interactions for RNA: ENST00000434939.1

ATG9A-211, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-211ENST00000434939 GJD4Q96KN9 370 aaPredicted RBP21.59■■□□□ 1.05
ATG9A-211ENST00000434939 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
ATG9A-211ENST00000434939 UPF1Q92900 1129 aaKnown RBP eCLIP21.58■■□□□ 1.05
ATG9A-211ENST00000434939 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
ATG9A-211ENST00000434939 CABP1Q9NZU7 370 aa21.58■■□□□ 1.05
ATG9A-211ENST00000434939 ALS2Q96Q42 1657 aa21.58■■□□□ 1.05
ATG9A-211ENST00000434939 SLIT2O94813 1529 aa21.58■■□□□ 1.04
ATG9A-211ENST00000434939 ABCA3Q99758 1704 aa21.58■■□□□ 1.04
ATG9A-211ENST00000434939 EVC2Q86UK5 1308 aa21.57■■□□□ 1.04
ATG9A-211ENST00000434939 TOPAZ1Q8N9V7 1692 aa21.57■■□□□ 1.04
ATG9A-211ENST00000434939 CCDC9Q9Y3X0 531 aaKnown RBP21.57■■□□□ 1.04
ATG9A-211ENST00000434939 POLR3AO14802 1390 aaPredicted RBP21.57■■□□□ 1.04
ATG9A-211ENST00000434939 ABTB2Q8N961 1025 aa21.54■■□□□ 1.04
ATG9A-211ENST00000434939 BTG4Q9NY30 223 aa21.53■■□□□ 1.04
ATG9A-211ENST00000434939 ZC3H6P61129 1189 aaKnown RBP21.52■■□□□ 1.04
ATG9A-211ENST00000434939 RALGAPBQ86X10 1494 aa21.52■■□□□ 1.03
ATG9A-211ENST00000434939 PLCH1Q4KWH8 1693 aa21.51■■□□□ 1.03
ATG9A-211ENST00000434939 CHRNA2Q15822 529 aa21.51■■□□□ 1.03
ATG9A-211ENST00000434939 PRDM11Q9NQV5 511 aa21.51■■□□□ 1.03
ATG9A-211ENST00000434939 VPS72Q15906 364 aa21.5■■□□□ 1.03
ATG9A-211ENST00000434939 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.49■■□□□ 1.03
ATG9A-211ENST00000434939 GLI3P10071 1580 aa21.48■■□□□ 1.03
ATG9A-211ENST00000434939 KIAA0232Q92628 1395 aa21.48■■□□□ 1.03
ATG9A-211ENST00000434939 CRYBG1Q9Y4K1 1723 aa21.46■■□□□ 1.03
ATG9A-211ENST00000434939 A0A0G2JS52 829 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 ZBTB7CA1YPR0 619 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 MYT1Q01538 1121 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 NLRP13Q86W25 1043 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 SEPT12Q8IYM1 358 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 STRN4Q9NRL3 753 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 NWD2Q9ULI1 1742 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 ATAD2Q6PL18 1390 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 USP6P35125 1406 aa21.45■■□□□ 1.02
ATG9A-211ENST00000434939 COL14A1Q05707 1796 aaKnown RBP21.44■■□□□ 1.02
ATG9A-211ENST00000434939 NLRP6P59044 892 aa21.44■■□□□ 1.02
ATG9A-211ENST00000434939 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
ATG9A-211ENST00000434939 PHRF1Q9P1Y6 1649 aaKnown RBP21.43■■□□□ 1.02
ATG9A-211ENST00000434939 FAM98CQ17RN3 349 aaKnown RBP21.42■■□□□ 1.02
ATG9A-211ENST00000434939 ST20-MTHFSA0A0A6YYL1 179 aa21.41■■□□□ 1.02
ATG9A-211ENST00000434939 GCP02774 474 aa21.41■■□□□ 1.02
ATG9A-211ENST00000434939 NRAPQ86VF7 1730 aa21.41■■□□□ 1.02
ATG9A-211ENST00000434939 USP19O94966 1318 aa21.4■■□□□ 1.02
ATG9A-211ENST00000434939 EVA1CP58658 441 aa21.4■■□□□ 1.02
ATG9A-211ENST00000434939 ZNF692Q9BU19 519 aaPredicted RBP21.39■■□□□ 1.01
ATG9A-211ENST00000434939 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
ATG9A-211ENST00000434939 TTC21BQ7Z4L5 1316 aa21.38■■□□□ 1.01
ATG9A-211ENST00000434939 SOX12O15370 315 aa21.38■■□□□ 1.01
ATG9A-211ENST00000434939 SLC12A5Q9H2X9 1139 aa21.38■■□□□ 1.01
ATG9A-211ENST00000434939 USP35Q9P2H5 1018 aa21.38■■□□□ 1.01
ATG9A-211ENST00000434939 SSH2Q76I76 1423 aa21.38■■□□□ 1.01
ATG9A-211ENST00000434939 BRD4O60885 1362 aaPredicted RBP21.37■■□□□ 1.01
ATG9A-211ENST00000434939 KTN1Q86UP2 1357 aaKnown RBP21.37■■□□□ 1.01
ATG9A-211ENST00000434939 SPATA31A5Q5VU36 1347 aa21.37■■□□□ 1.01
ATG9A-211ENST00000434939 SPATA31A7Q8IWB4 1347 aa21.37■■□□□ 1.01
ATG9A-211ENST00000434939 NRKQ7Z2Y5 1582 aa21.37■■□□□ 1.01
ATG9A-211ENST00000434939 ONECUT3O60422 494 aaPredicted RBP21.37■■□□□ 1.01
ATG9A-211ENST00000434939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
ATG9A-211ENST00000434939 BRWD3Q6RI45 1802 aa21.36■■□□□ 1.01
ATG9A-211ENST00000434939 KRT27Q7Z3Y8 459 aa21.35■■□□□ 1.01
ATG9A-211ENST00000434939 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
ATG9A-211ENST00000434939 TESK2Q96S53 571 aa21.35■■□□□ 1.01
ATG9A-211ENST00000434939 ZRANB1Q9UGI0 708 aa21.35■■□□□ 1.01
ATG9A-211ENST00000434939 LARP1Q6PKG0 1096 aaKnown RBP21.34■■□□□ 1.01
ATG9A-211ENST00000434939 CPSF1Q10570 1443 aaKnown RBP21.34■■□□□ 1.01
ATG9A-211ENST00000434939 FAM182BQ5T319 152 aa21.33■■□□□ 1.01
ATG9A-211ENST00000434939 PIK3C2AO00443 1686 aa21.33■■□□□ 1
ATG9A-211ENST00000434939 CAMTA1Q9Y6Y1 1673 aa21.33■■□□□ 1
ATG9A-211ENST00000434939 CPDO75976 1380 aa21.33■■□□□ 1
ATG9A-211ENST00000434939 AKAP12Q02952 1782 aa21.33■■□□□ 1
ATG9A-211ENST00000434939 SPATA31A1Q5TZJ5 1347 aa21.32■■□□□ 1
ATG9A-211ENST00000434939 HDGFL2Q7Z4V5 671 aaPredicted RBP21.31■■□□□ 1
ATG9A-211ENST00000434939 TTC21AQ8NDW8 1320 aa21.3■■□□□ 1
ATG9A-211ENST00000434939 NME9Q86XW9 330 aa21.3■■□□□ 1
ATG9A-211ENST00000434939 USP47Q96K76 1375 aa21.3■■□□□ 1
ATG9A-211ENST00000434939 CD163L1Q9NR16 1453 aa21.29■■□□□ 1
ATG9A-211ENST00000434939 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
ATG9A-211ENST00000434939 SLIT3O75094 1523 aa21.28■■□□□ 1
ATG9A-211ENST00000434939 TERF2IPQ9NYB0 399 aa21.27■■□□□ 1
ATG9A-211ENST00000434939 TIMELESSQ9UNS1 1208 aa21.27■■□□□ 1
ATG9A-211ENST00000434939 LMO7Q8WWI1 1683 aa21.26■□□□□ 0.99
ATG9A-211ENST00000434939 CCDC125Q86Z20 511 aa21.26■□□□□ 0.99
ATG9A-211ENST00000434939 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
ATG9A-211ENST00000434939 AXIN2Q9Y2T1 843 aa21.26■□□□□ 0.99
ATG9A-211ENST00000434939 MON2Q7Z3U7 1717 aa21.25■□□□□ 0.99
ATG9A-211ENST00000434939 DEFB132Q7Z7B7 95 aa21.25■□□□□ 0.99
ATG9A-211ENST00000434939 PUS7Q96PZ0 661 aaKnown RBP21.25■□□□□ 0.99
ATG9A-211ENST00000434939 A0A1W2PP64 1363 aa21.24■□□□□ 0.99
ATG9A-211ENST00000434939 TMF1P82094 1093 aa21.24■□□□□ 0.99
ATG9A-211ENST00000434939 SF3B2Q13435 895 aaKnown RBP21.24■□□□□ 0.99
ATG9A-211ENST00000434939 ARHGEF25Q86VW2 580 aa21.24■□□□□ 0.99
ATG9A-211ENST00000434939 TCP11L2Q8N4U5 519 aa21.24■□□□□ 0.99
ATG9A-211ENST00000434939 AATKQ6ZMQ8 1374 aa21.23■□□□□ 0.99
ATG9A-211ENST00000434939 BLMP54132 1417 aaPredicted RBP21.23■□□□□ 0.99
ATG9A-211ENST00000434939 COL5A2P05997 1499 aaPredicted RBP21.23■□□□□ 0.99
ATG9A-211ENST00000434939 TOM1L2Q6ZVM7 507 aa21.22■□□□□ 0.99
ATG9A-211ENST00000434939 SLC24A1O60721 1099 aa21.21■□□□□ 0.99
ATG9A-211ENST00000434939 BARGINQ6ZT62 677 aa21.21■□□□□ 0.99
ATG9A-211ENST00000434939 THSD7AQ9UPZ6 1657 aa21.21■□□□□ 0.99
ATG9A-211ENST00000434939 CSB-PGBD3P0DP91 1061 aa21.2■□□□□ 0.98
ATG9A-211ENST00000434939 EDC4Q6P2E9 1401 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms