RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
CDC42EP1-204ENST00000434728 BAG6P46379 1132 aa19.57■□□□□ 0.72
CDC42EP1-204ENST00000434728 ITSN1Q15811 1721 aa19.56■□□□□ 0.72
CDC42EP1-204ENST00000434728 NRAPQ86VF7 1730 aa19.56■□□□□ 0.72
CDC42EP1-204ENST00000434728 ONECUT3O60422 494 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP1-204ENST00000434728 STAC3Q96MF2 364 aa19.56■□□□□ 0.72
CDC42EP1-204ENST00000434728 PRDM11Q9NQV5 511 aa19.56■□□□□ 0.72
CDC42EP1-204ENST00000434728 PRR36Q9H6K5 1346 aa19.55■□□□□ 0.72
CDC42EP1-204ENST00000434728 ARHGEF28Q8N1W1 1705 aaKnown RBP19.53■□□□□ 0.72
CDC42EP1-204ENST00000434728 NUDT16Q96DE0 195 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-204ENST00000434728 RGPD1P0DJD0 1748 aa19.5■□□□□ 0.71
CDC42EP1-204ENST00000434728 SPATA31A5Q5VU36 1347 aa19.5■□□□□ 0.71
CDC42EP1-204ENST00000434728 SPATA31A7Q8IWB4 1347 aa19.5■□□□□ 0.71
CDC42EP1-204ENST00000434728 STRN4Q9NRL3 753 aa19.49■□□□□ 0.71
CDC42EP1-204ENST00000434728 ATP7BP35670 1465 aa19.48■□□□□ 0.71
CDC42EP1-204ENST00000434728 CRYBG1Q9Y4K1 1723 aa19.48■□□□□ 0.71
CDC42EP1-204ENST00000434728 PSDA5PKW4 1024 aaPredicted RBP19.48■□□□□ 0.71
CDC42EP1-204ENST00000434728 FAM182BQ5T319 152 aa19.48■□□□□ 0.71
CDC42EP1-204ENST00000434728 KIAA0232Q92628 1395 aa19.47■□□□□ 0.71
CDC42EP1-204ENST00000434728 NUTM2GQ5VZR2 741 aa19.47■□□□□ 0.71
CDC42EP1-204ENST00000434728 ZC3H6P61129 1189 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-204ENST00000434728 CHRNA2Q15822 529 aa19.46■□□□□ 0.71
CDC42EP1-204ENST00000434728 CDK19Q9BWU1 502 aa19.46■□□□□ 0.71
CDC42EP1-204ENST00000434728 PHRF1Q9P1Y6 1649 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-204ENST00000434728 EVA1CP58658 441 aa19.45■□□□□ 0.7
CDC42EP1-204ENST00000434728 EN1Q05925 392 aaPredicted RBP19.45■□□□□ 0.7
CDC42EP1-204ENST00000434728 LRP5O75197 1615 aa19.44■□□□□ 0.7
CDC42EP1-204ENST00000434728 USP35Q9P2H5 1018 aa19.44■□□□□ 0.7
CDC42EP1-204ENST00000434728 THSD7AQ9UPZ6 1657 aa19.43■□□□□ 0.7
CDC42EP1-204ENST00000434728 HRCP23327 699 aa19.43■□□□□ 0.7
CDC42EP1-204ENST00000434728 CCDC61Q9Y6R9 512 aa19.42■□□□□ 0.7
CDC42EP1-204ENST00000434728 ACEP12821 1306 aa19.42■□□□□ 0.7
CDC42EP1-204ENST00000434728 SPATA31A1Q5TZJ5 1347 aa19.42■□□□□ 0.7
CDC42EP1-204ENST00000434728 TOPAZ1Q8N9V7 1692 aa19.41■□□□□ 0.7
CDC42EP1-204ENST00000434728 ABTB2Q8N961 1025 aa19.41■□□□□ 0.7
CDC42EP1-204ENST00000434728 KIAA1210Q9ULL0 1709 aa19.4■□□□□ 0.7
CDC42EP1-204ENST00000434728 SRPK2P78362 688 aaKnown RBP19.4■□□□□ 0.7
CDC42EP1-204ENST00000434728 NBPF8Q3BBV2 869 aa19.4■□□□□ 0.7
CDC42EP1-204ENST00000434728 FAM196AQ6ZSG2 479 aa19.4■□□□□ 0.7
CDC42EP1-204ENST00000434728 PDE3BQ13370 1112 aa19.39■□□□□ 0.69
CDC42EP1-204ENST00000434728 POLR3AO14802 1390 aaPredicted RBP19.39■□□□□ 0.69
CDC42EP1-204ENST00000434728 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.69
CDC42EP1-204ENST00000434728 TRIM37O94972 964 aa19.38■□□□□ 0.69
CDC42EP1-204ENST00000434728 R3HDM1Q15032 1099 aaKnown RBP19.38■□□□□ 0.69
CDC42EP1-204ENST00000434728 SSH2Q76I76 1423 aa19.36■□□□□ 0.69
CDC42EP1-204ENST00000434728 ZBTB7CA1YPR0 619 aa19.36■□□□□ 0.69
CDC42EP1-204ENST00000434728 APBA3O96018 575 aa19.36■□□□□ 0.69
CDC42EP1-204ENST00000434728 NRKQ7Z2Y5 1582 aa19.36■□□□□ 0.69
CDC42EP1-204ENST00000434728 DISP2A7MBM2 1401 aa19.35■□□□□ 0.69
CDC42EP1-204ENST00000434728 PLEKHG3A1L390 1219 aa19.35■□□□□ 0.69
CDC42EP1-204ENST00000434728 EZH2Q15910 746 aaKnown RBP19.35■□□□□ 0.69
CDC42EP1-204ENST00000434728 NLRP13Q86W25 1043 aa19.35■□□□□ 0.69
CDC42EP1-204ENST00000434728 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
CDC42EP1-204ENST00000434728 CENPJQ9HC77 1338 aaPredicted RBP19.34■□□□□ 0.69
CDC42EP1-204ENST00000434728 NBPF1Q3BBV0 1214 aa19.33■□□□□ 0.68
CDC42EP1-204ENST00000434728 TCP11L2Q8N4U5 519 aa19.33■□□□□ 0.68
CDC42EP1-204ENST00000434728 LARP1Q6PKG0 1096 aaKnown RBP19.32■□□□□ 0.68
CDC42EP1-204ENST00000434728 BARGINQ6ZT62 677 aa19.32■□□□□ 0.68
CDC42EP1-204ENST00000434728 CPDO75976 1380 aa19.32■□□□□ 0.68
CDC42EP1-204ENST00000434728 QRICH2Q9H0J4 1663 aa19.31■□□□□ 0.68
CDC42EP1-204ENST00000434728 CABP2Q9NPB3 220 aa19.31■□□□□ 0.68
CDC42EP1-204ENST00000434728 PARD3Q8TEW0 1356 aa19.31■□□□□ 0.68
CDC42EP1-204ENST00000434728 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
CDC42EP1-204ENST00000434728 USP19O94966 1318 aa19.3■□□□□ 0.68
CDC42EP1-204ENST00000434728 GCP02774 474 aa19.3■□□□□ 0.68
CDC42EP1-204ENST00000434728 CAMKK2Q96RR4 588 aa19.29■□□□□ 0.68
CDC42EP1-204ENST00000434728 THRAP3Q9Y2W1 955 aaKnown RBP19.29■□□□□ 0.68
CDC42EP1-204ENST00000434728 LMO7Q8WWI1 1683 aa19.28■□□□□ 0.68
CDC42EP1-204ENST00000434728 NBPF14Q5TI25 921 aa19.28■□□□□ 0.68
CDC42EP1-204ENST00000434728 NLRP6P59044 892 aa19.27■□□□□ 0.68
CDC42EP1-204ENST00000434728 BRD4O60885 1362 aaPredicted RBP19.27■□□□□ 0.68
CDC42EP1-204ENST00000434728 COL5A2P05997 1499 aaPredicted RBP19.25■□□□□ 0.67
CDC42EP1-204ENST00000434728 CABP1Q9NZU7 370 aa19.25■□□□□ 0.67
CDC42EP1-204ENST00000434728 USP6P35125 1406 aa19.25■□□□□ 0.67
CDC42EP1-204ENST00000434728 CRB1P82279 1406 aa19.25■□□□□ 0.67
CDC42EP1-204ENST00000434728 C11orf95C9JLR9 678 aaPredicted RBP19.24■□□□□ 0.67
CDC42EP1-204ENST00000434728 PARP4Q9UKK3 1724 aaKnown RBP19.24■□□□□ 0.67
CDC42EP1-204ENST00000434728 EVC2Q86UK5 1308 aa19.24■□□□□ 0.67
CDC42EP1-204ENST00000434728 RREB1Q92766 1687 aa19.24■□□□□ 0.67
CDC42EP1-204ENST00000434728 TOM1L2Q6ZVM7 507 aa19.23■□□□□ 0.67
CDC42EP1-204ENST00000434728 NUP188Q5SRE5 1749 aa19.22■□□□□ 0.67
CDC42EP1-204ENST00000434728 OVOS2A0A0G2JMS6 1433 aa19.21■□□□□ 0.67
CDC42EP1-204ENST00000434728 OVOS2A0A0J9YW53 1432 aa19.21■□□□□ 0.67
CDC42EP1-204ENST00000434728 OVOS2Q6IE36 1432 aa19.21■□□□□ 0.67
CDC42EP1-204ENST00000434728 PPP1R1BQ9UD71 204 aaPredicted RBP19.21■□□□□ 0.67
CDC42EP1-204ENST00000434728 DDB1Q16531 1140 aa19.2■□□□□ 0.66
CDC42EP1-204ENST00000434728 AATKQ6ZMQ8 1374 aa19.19■□□□□ 0.66
CDC42EP1-204ENST00000434728 SOX12O15370 315 aa19.19■□□□□ 0.66
CDC42EP1-204ENST00000434728 L3MBTL2Q969R5 705 aa19.19■□□□□ 0.66
CDC42EP1-204ENST00000434728 ROCK2O75116 1388 aaKnown RBP19.19■□□□□ 0.66
CDC42EP1-204ENST00000434728 CSB-PGBD3P0DP91 1061 aa19.18■□□□□ 0.66
CDC42EP1-204ENST00000434728 SLIT3O75094 1523 aa19.18■□□□□ 0.66
CDC42EP1-204ENST00000434728 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
CDC42EP1-204ENST00000434728 PIK3C2AO00443 1686 aa19.17■□□□□ 0.66
CDC42EP1-204ENST00000434728 LRRC37A3O60309 1634 aa19.17■□□□□ 0.66
CDC42EP1-204ENST00000434728 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
CDC42EP1-204ENST00000434728 KCNH5Q8NCM2 988 aa19.16■□□□□ 0.66
CDC42EP1-204ENST00000434728 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
CDC42EP1-204ENST00000434728 ZNF692Q9BU19 519 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP1-204ENST00000434728 SPON1Q9HCB6 807 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms