RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 SOCS7O14512 581 aa11.24□□□□□ -0.61
HDAC9-213ENST00000433709 SKOR1P84550 965 aa11.23□□□□□ -0.61
HDAC9-213ENST00000433709 FKBPLQ9UIM3 349 aa11.23□□□□□ -0.61
HDAC9-213ENST00000433709 RGS20O76081 388 aa11.22□□□□□ -0.61
HDAC9-213ENST00000433709 SH3BP2P78314 561 aa11.22□□□□□ -0.61
HDAC9-213ENST00000433709 ARMC2Q8NEN0 867 aa11.22□□□□□ -0.61
HDAC9-213ENST00000433709 ZNF511Q8NB15 262 aa11.21□□□□□ -0.61
HDAC9-213ENST00000433709 TBC1D2BQ9UPU7 963 aa11.21□□□□□ -0.61
HDAC9-213ENST00000433709 APBB1O00213 710 aa11.2□□□□□ -0.62
HDAC9-213ENST00000433709 ZNF697Q5TEC3 545 aa11.2□□□□□ -0.62
HDAC9-213ENST00000433709 ZNF598Q86UK7 904 aaKnown RBP11.2□□□□□ -0.62
HDAC9-213ENST00000433709 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
HDAC9-213ENST00000433709 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
HDAC9-213ENST00000433709 NDUFB9Q9Y6M9 179 aa11.2□□□□□ -0.62
HDAC9-213ENST00000433709 GPR37L1O60883 481 aa11.19□□□□□ -0.62
HDAC9-213ENST00000433709 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
HDAC9-213ENST00000433709 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
HDAC9-213ENST00000433709 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
HDAC9-213ENST00000433709 WNT7BP56706 349 aa11.17□□□□□ -0.62
HDAC9-213ENST00000433709 PNMA1Q8ND90 353 aa11.17□□□□□ -0.62
HDAC9-213ENST00000433709 COG6Q9Y2V7 657 aa11.17□□□□□ -0.62
HDAC9-213ENST00000433709 FOXC1Q12948 553 aa11.16□□□□□ -0.62
HDAC9-213ENST00000433709 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
HDAC9-213ENST00000433709 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
HDAC9-213ENST00000433709 ZC3H4Q9UPT8 1303 aaKnown RBP11.15□□□□□ -0.62
HDAC9-213ENST00000433709 AGERQ15109 404 aa11.15□□□□□ -0.62
HDAC9-213ENST00000433709 C4orf48Q5BLP8 95 aa11.15□□□□□ -0.62
HDAC9-213ENST00000433709 SH3BP5LQ7L8J4 393 aa11.15□□□□□ -0.62
HDAC9-213ENST00000433709 GPKOWQ92917 476 aaPredicted RBP eCLIP11.15□□□□□ -0.62
HDAC9-213ENST00000433709 PRM3Q9NNZ6 103 aa11.15□□□□□ -0.62
HDAC9-213ENST00000433709 PKD2L1Q9P0L9 805 aa11.15□□□□□ -0.62
HDAC9-213ENST00000433709 ABL2P42684 1182 aa11.14□□□□□ -0.63
HDAC9-213ENST00000433709 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
HDAC9-213ENST00000433709 IRF5Q13568 498 aa11.13□□□□□ -0.63
HDAC9-213ENST00000433709 TRIM67Q6ZTA4 783 aa11.13□□□□□ -0.63
HDAC9-213ENST00000433709 BPHLQ86WA6 291 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-213ENST00000433709 OCSTAMPQ9BR26 566 aa11.13□□□□□ -0.63
HDAC9-213ENST00000433709 MAGEB6P1A0A0J9YX57 407 aa11.12□□□□□ -0.63
HDAC9-213ENST00000433709 WNT7AO00755 349 aa11.12□□□□□ -0.63
HDAC9-213ENST00000433709 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
HDAC9-213ENST00000433709 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
HDAC9-213ENST00000433709 MRGPRX2Q96LB1 330 aa11.12□□□□□ -0.63
HDAC9-213ENST00000433709 ARHGAP9Q9BRR9 750 aa11.12□□□□□ -0.63
HDAC9-213ENST00000433709 CARD14Q9BXL6 1004 aa11.12□□□□□ -0.63
HDAC9-213ENST00000433709 TNFRSF10AO00220 468 aa11.11□□□□□ -0.63
HDAC9-213ENST00000433709 RAD21O60216 631 aa11.11□□□□□ -0.63
HDAC9-213ENST00000433709 GDF9O60383 454 aa11.11□□□□□ -0.63
HDAC9-213ENST00000433709 PTK2Q05397 1052 aa11.11□□□□□ -0.63
HDAC9-213ENST00000433709 GPSM3Q9Y4H4 160 aa11.1□□□□□ -0.63
HDAC9-213ENST00000433709 FBXO45P0C2W1 286 aa11.09□□□□□ -0.63
HDAC9-213ENST00000433709 ZBBXA8MT70 800 aa11.08□□□□□ -0.64
HDAC9-213ENST00000433709 VARSP26640 1264 aaKnown RBP11.08□□□□□ -0.64
HDAC9-213ENST00000433709 ZBTB33Q86T24 672 aa11.08□□□□□ -0.64
HDAC9-213ENST00000433709 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
HDAC9-213ENST00000433709 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
HDAC9-213ENST00000433709 SIAH2O43255 324 aa11.07□□□□□ -0.64
HDAC9-213ENST00000433709 PDZRN3Q9UPQ7 1066 aa11.07□□□□□ -0.64
HDAC9-213ENST00000433709 NR1H3Q13133 447 aa11.06□□□□□ -0.64
HDAC9-213ENST00000433709 ERFEQ4G0M1 354 aa11.06□□□□□ -0.64
HDAC9-213ENST00000433709 FAM174AQ8TBP5 190 aa11.06□□□□□ -0.64
HDAC9-213ENST00000433709 C1QTNF2Q9BXJ5 285 aa11.06□□□□□ -0.64
HDAC9-213ENST00000433709 VAC14Q08AM6 782 aa11.05□□□□□ -0.64
HDAC9-213ENST00000433709 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
HDAC9-213ENST00000433709 NACADO15069 1562 aa11.04□□□□□ -0.64
HDAC9-213ENST00000433709 PRR20EP86478 221 aa11.04□□□□□ -0.64
HDAC9-213ENST00000433709 PRR20CP86479 221 aa11.04□□□□□ -0.64
HDAC9-213ENST00000433709 PRR20DP86480 221 aa11.04□□□□□ -0.64
HDAC9-213ENST00000433709 PRR20BP86481 221 aa11.04□□□□□ -0.64
HDAC9-213ENST00000433709 PRR20AP86496 221 aa11.04□□□□□ -0.64
HDAC9-213ENST00000433709 A6NJR5 290 aa11.03□□□□□ -0.64
HDAC9-213ENST00000433709 C14orf37Q86TY3 774 aa11.03□□□□□ -0.64
HDAC9-213ENST00000433709 CYP4X1Q8N118 509 aa11.03□□□□□ -0.64
HDAC9-213ENST00000433709 ARID5BQ14865 1188 aa11.02□□□□□ -0.65
HDAC9-213ENST00000433709 PROSER2Q86WR7 435 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-213ENST00000433709 FNBP4Q8N3X1 1017 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-213ENST00000433709 SNIP1Q8TAD8 396 aaKnown RBP11.02□□□□□ -0.65
HDAC9-213ENST00000433709 TOR4AQ9NXH8 423 aa11.02□□□□□ -0.65
HDAC9-213ENST00000433709 TTC24A2A3L6 582 aaPredicted RBP11.01□□□□□ -0.65
HDAC9-213ENST00000433709 J3QL48 77 aa11.01□□□□□ -0.65
HDAC9-213ENST00000433709 GFRA3O60609 400 aa11.01□□□□□ -0.65
HDAC9-213ENST00000433709 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
HDAC9-213ENST00000433709 TRMT44Q8IYL2 757 aaKnown RBP11.01□□□□□ -0.65
HDAC9-213ENST00000433709 ZMYND15Q9H091 742 aa11.01□□□□□ -0.65
HDAC9-213ENST00000433709 PCDHB9Q9Y5E1 797 aa11.01□□□□□ -0.65
HDAC9-213ENST00000433709 WASHC4Q2M389 1173 aa11□□□□□ -0.65
HDAC9-213ENST00000433709 WWC1Q8IX03 1113 aa11□□□□□ -0.65
HDAC9-213ENST00000433709 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
HDAC9-213ENST00000433709 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
HDAC9-213ENST00000433709 CDK15Q96Q40 435 aa10.99□□□□□ -0.65
HDAC9-213ENST00000433709 POM121CA8CG34 1229 aa10.98□□□□□ -0.65
HDAC9-213ENST00000433709 MPNDQ8N594 471 aa10.98□□□□□ -0.65
HDAC9-213ENST00000433709 ZNF330Q9Y3S2 320 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-213ENST00000433709 SMPD1P17405 629 aa10.97□□□□□ -0.65
HDAC9-213ENST00000433709 GRM5P41594 1212 aa10.97□□□□□ -0.65
HDAC9-213ENST00000433709 VASH1Q7L8A9 365 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-213ENST00000433709 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-213ENST00000433709 MYO15BQ96JP2 1530 aa10.96□□□□□ -0.65
HDAC9-213ENST00000433709 EIF4G2P78344 907 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC9-213ENST00000433709 TRAK2O60296 914 aa10.95□□□□□ -0.66
HDAC9-213ENST00000433709 MAP4K5Q9Y4K4 846 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms