RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 COL14A1Q05707 1796 aaKnown RBP31.58■■■□□ 2.65
RPUSD3-206ENST00000433535 EP400Q96L91 3159 aa31.54■■■□□ 2.64
RPUSD3-206ENST00000433535 QRICH2Q9H0J4 1663 aa31.54■■■□□ 2.64
RPUSD3-206ENST00000433535 PHRF1Q9P1Y6 1649 aaKnown RBP31.53■■■□□ 2.64
RPUSD3-206ENST00000433535 SEPT12Q8IYM1 358 aa31.53■■■□□ 2.64
RPUSD3-206ENST00000433535 BTG4Q9NY30 223 aa31.53■■■□□ 2.64
RPUSD3-206ENST00000433535 POLR3AO14802 1390 aaPredicted RBP31.52■■■□□ 2.64
RPUSD3-206ENST00000433535 L3MBTL2Q969R5 705 aa31.51■■■□□ 2.63
RPUSD3-206ENST00000433535 SIN3AQ96ST3 1273 aa31.5■■■□□ 2.63
RPUSD3-206ENST00000433535 ACEP12821 1306 aa31.49■■■□□ 2.63
RPUSD3-206ENST00000433535 CENPJQ9HC77 1338 aaPredicted RBP31.49■■■□□ 2.63
RPUSD3-206ENST00000433535 CCDC61Q9Y6R9 512 aa31.49■■■□□ 2.63
RPUSD3-206ENST00000433535 TRPM1Q7Z4N2 1603 aa31.48■■■□□ 2.63
RPUSD3-206ENST00000433535 NUTM2GQ5VZR2 741 aa31.47■■■□□ 2.63
RPUSD3-206ENST00000433535 PRDM11Q9NQV5 511 aa31.46■■■□□ 2.63
RPUSD3-206ENST00000433535 ONECUT3O60422 494 aaPredicted RBP31.45■■■□□ 2.63
RPUSD3-206ENST00000433535 BLMP54132 1417 aaPredicted RBP31.45■■■□□ 2.63
RPUSD3-206ENST00000433535 SRPK2P78362 688 aaKnown RBP31.45■■■□□ 2.63
RPUSD3-206ENST00000433535 CCDC125Q86Z20 511 aa31.45■■■□□ 2.63
RPUSD3-206ENST00000433535 PPIP5K1Q6PFW1 1433 aa31.44■■■□□ 2.62
RPUSD3-206ENST00000433535 A0A0G2JS52 829 aa31.44■■■□□ 2.62
RPUSD3-206ENST00000433535 PLEKHG3A1L390 1219 aa31.44■■■□□ 2.62
RPUSD3-206ENST00000433535 MYT1Q01538 1121 aa31.44■■■□□ 2.62
RPUSD3-206ENST00000433535 NBPF8Q3BBV2 869 aa31.44■■■□□ 2.62
RPUSD3-206ENST00000433535 KIAA0232Q92628 1395 aa31.43■■■□□ 2.62
RPUSD3-206ENST00000433535 CABP2Q9NPB3 220 aa31.43■■■□□ 2.62
RPUSD3-206ENST00000433535 NEUROD1Q13562 356 aa31.42■■■□□ 2.62
RPUSD3-206ENST00000433535 FAM98CQ17RN3 349 aaKnown RBP31.42■■■□□ 2.62
RPUSD3-206ENST00000433535 NRKQ7Z2Y5 1582 aa31.42■■■□□ 2.62
RPUSD3-206ENST00000433535 CHRNA2Q15822 529 aa31.4■■■□□ 2.62
RPUSD3-206ENST00000433535 KRT27Q7Z3Y8 459 aa31.4■■■□□ 2.62
RPUSD3-206ENST00000433535 SPATA31A5Q5VU36 1347 aa31.38■■■□□ 2.61
RPUSD3-206ENST00000433535 SPATA31A7Q8IWB4 1347 aa31.38■■■□□ 2.61
RPUSD3-206ENST00000433535 ZC3H6P61129 1189 aaKnown RBP31.37■■■□□ 2.61
RPUSD3-206ENST00000433535 THSD7AQ9UPZ6 1657 aa31.37■■■□□ 2.61
RPUSD3-206ENST00000433535 ROCK2O75116 1388 aaKnown RBP31.35■■■□□ 2.61
RPUSD3-206ENST00000433535 ABTB2Q8N961 1025 aa31.35■■■□□ 2.61
RPUSD3-206ENST00000433535 DEFB132Q7Z7B7 95 aa31.33■■■□□ 2.61
RPUSD3-206ENST00000433535 ZRANB1Q9UGI0 708 aa31.33■■■□□ 2.61
RPUSD3-206ENST00000433535 USP19O94966 1318 aa31.31■■■□□ 2.6
RPUSD3-206ENST00000433535 STRN4Q9NRL3 753 aa31.31■■■□□ 2.6
RPUSD3-206ENST00000433535 SF3B2Q13435 895 aaKnown RBP31.3■■■□□ 2.6
RPUSD3-206ENST00000433535 CABP1Q9NZU7 370 aa31.29■■■□□ 2.6
RPUSD3-206ENST00000433535 USP6P35125 1406 aa31.29■■■□□ 2.6
RPUSD3-206ENST00000433535 LMO7Q8WWI1 1683 aa31.29■■■□□ 2.6
RPUSD3-206ENST00000433535 SPATA31A1Q5TZJ5 1347 aa31.28■■■□□ 2.6
RPUSD3-206ENST00000433535 FAM182BQ5T319 152 aa31.27■■■□□ 2.6
RPUSD3-206ENST00000433535 CAMTA1Q9Y6Y1 1673 aa31.27■■■□□ 2.6
RPUSD3-206ENST00000433535 EVC2Q86UK5 1308 aa31.26■■■□□ 2.6
RPUSD3-206ENST00000433535 SSH2Q76I76 1423 aa31.26■■■□□ 2.6
RPUSD3-206ENST00000433535 CPDO75976 1380 aa31.25■■■□□ 2.59
RPUSD3-206ENST00000433535 NLRP13Q86W25 1043 aa31.24■■■□□ 2.59
RPUSD3-206ENST00000433535 PIK3C2AO00443 1686 aa31.23■■■□□ 2.59
RPUSD3-206ENST00000433535 BRD4O60885 1362 aaPredicted RBP31.23■■■□□ 2.59
RPUSD3-206ENST00000433535 RGPD1P0DJD0 1748 aa31.22■■■□□ 2.59
RPUSD3-206ENST00000433535 USP35Q9P2H5 1018 aa31.22■■■□□ 2.59
RPUSD3-206ENST00000433535 GCP02774 474 aa31.2■■■□□ 2.59
RPUSD3-206ENST00000433535 SLIT3O75094 1523 aa31.19■■■□□ 2.58
RPUSD3-206ENST00000433535 EVA1CP58658 441 aa31.19■■■□□ 2.58
RPUSD3-206ENST00000433535 AKAP12Q02952 1782 aa31.19■■■□□ 2.58
RPUSD3-206ENST00000433535 LARP1Q6PKG0 1096 aaKnown RBP31.18■■■□□ 2.58
RPUSD3-206ENST00000433535 TNS1Q9HBL0 1735 aaKnown RBP31.18■■■□□ 2.58
RPUSD3-206ENST00000433535 COL5A2P05997 1499 aaPredicted RBP31.16■■■□□ 2.58
RPUSD3-206ENST00000433535 BAG6P46379 1132 aa31.16■■■□□ 2.58
RPUSD3-206ENST00000433535 NLRP6P59044 892 aa31.16■■■□□ 2.58
RPUSD3-206ENST00000433535 ZBTB7CA1YPR0 619 aa31.15■■■□□ 2.58
RPUSD3-206ENST00000433535 BARGINQ6ZT62 677 aa31.12■■■□□ 2.57
RPUSD3-206ENST00000433535 TONSLQ96HA7 1378 aa31.12■■■□□ 2.57
RPUSD3-206ENST00000433535 TCP11L2Q8N4U5 519 aa31.1■■■□□ 2.57
RPUSD3-206ENST00000433535 CARD11Q9BXL7 1154 aa31.1■■■□□ 2.57
RPUSD3-206ENST00000433535 EN1Q05925 392 aaPredicted RBP31.09■■■□□ 2.57
RPUSD3-206ENST00000433535 SBNO2Q9Y2G9 1366 aa31.08■■■□□ 2.57
RPUSD3-206ENST00000433535 TTC21BQ7Z4L5 1316 aa31.08■■■□□ 2.57
RPUSD3-206ENST00000433535 SRCAPQ6ZRS2 3230 aa31.07■■■□□ 2.57
RPUSD3-206ENST00000433535 CPSF1Q10570 1443 aaKnown RBP31.07■■■□□ 2.57
RPUSD3-206ENST00000433535 COL18A1P39060 1754 aa31.07■■■□□ 2.56
RPUSD3-206ENST00000433535 MON2Q7Z3U7 1717 aa31.07■■■□□ 2.56
RPUSD3-206ENST00000433535 DISP2A7MBM2 1401 aa31.07■■■□□ 2.56
RPUSD3-206ENST00000433535 AATKQ6ZMQ8 1374 aa31.06■■■□□ 2.56
RPUSD3-206ENST00000433535 PARP4Q9UKK3 1724 aaKnown RBP31.06■■■□□ 2.56
RPUSD3-206ENST00000433535 CRB1P82279 1406 aa31.06■■■□□ 2.56
RPUSD3-206ENST00000433535 FAM196AQ6ZSG2 479 aa31.05■■■□□ 2.56
RPUSD3-206ENST00000433535 ZNF692Q9BU19 519 aaPredicted RBP31.05■■■□□ 2.56
RPUSD3-206ENST00000433535 KTN1Q86UP2 1357 aaKnown RBP31.05■■■□□ 2.56
RPUSD3-206ENST00000433535 TRIM37O94972 964 aa31.04■■■□□ 2.56
RPUSD3-206ENST00000433535 PDE3BQ13370 1112 aa31.03■■■□□ 2.56
RPUSD3-206ENST00000433535 PSDA5PKW4 1024 aaPredicted RBP31.02■■■□□ 2.56
RPUSD3-206ENST00000433535 SOX12O15370 315 aa31.02■■■□□ 2.56
RPUSD3-206ENST00000433535 THRAP3Q9Y2W1 955 aaKnown RBP31.02■■■□□ 2.56
RPUSD3-206ENST00000433535 TTC21AQ8NDW8 1320 aa31.01■■■□□ 2.56
RPUSD3-206ENST00000433535 LRRC37A3O60309 1634 aa31■■■□□ 2.55
RPUSD3-206ENST00000433535 RGPD5Q99666 1765 aa31■■■□□ 2.55
RPUSD3-206ENST00000433535 NFAT5O94916 1531 aa30.99■■■□□ 2.55
RPUSD3-206ENST00000433535 CD163L1Q9NR16 1453 aa30.99■■■□□ 2.55
RPUSD3-206ENST00000433535 WNK3Q9BYP7 1800 aa30.98■■■□□ 2.55
RPUSD3-206ENST00000433535 AXIN2Q9Y2T1 843 aa30.98■■■□□ 2.55
RPUSD3-206ENST00000433535 EZH2Q15910 746 aaKnown RBP30.97■■■□□ 2.55
RPUSD3-206ENST00000433535 LRP5O75197 1615 aa30.96■■■□□ 2.55
RPUSD3-206ENST00000433535 TOM1L2Q6ZVM7 507 aa30.96■■■□□ 2.55
RPUSD3-206ENST00000433535 ARHGEF25Q86VW2 580 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms