RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ATP7BP35670 1465 aa20.73■□□□□ 0.91
SMARCE1-205ENST00000431889 NRAPQ86VF7 1730 aa20.73■□□□□ 0.91
SMARCE1-205ENST00000431889 FAM98CQ17RN3 349 aaKnown RBP20.72■□□□□ 0.91
SMARCE1-205ENST00000431889 EIF3AQ14152 1382 aaKnown RBP20.71■□□□□ 0.91
SMARCE1-205ENST00000431889 ITSN1Q15811 1721 aa20.71■□□□□ 0.91
SMARCE1-205ENST00000431889 CRYBG1Q9Y4K1 1723 aa20.71■□□□□ 0.91
SMARCE1-205ENST00000431889 FAM182BQ5T319 152 aa20.71■□□□□ 0.91
SMARCE1-205ENST00000431889 CHRNA2Q15822 529 aa20.7■□□□□ 0.9
SMARCE1-205ENST00000431889 COL14A1Q05707 1796 aaKnown RBP20.68■□□□□ 0.9
SMARCE1-205ENST00000431889 KRT27Q7Z3Y8 459 aa20.68■□□□□ 0.9
SMARCE1-205ENST00000431889 ZC3H6P61129 1189 aaKnown RBP20.67■□□□□ 0.9
SMARCE1-205ENST00000431889 STAC3Q96MF2 364 aa20.67■□□□□ 0.9
SMARCE1-205ENST00000431889 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
SMARCE1-205ENST00000431889 ZRANB1Q9UGI0 708 aa20.67■□□□□ 0.9
SMARCE1-205ENST00000431889 ACEP12821 1306 aa20.67■□□□□ 0.9
SMARCE1-205ENST00000431889 PRDM11Q9NQV5 511 aa20.66■□□□□ 0.9
SMARCE1-205ENST00000431889 STRN4Q9NRL3 753 aa20.65■□□□□ 0.9
SMARCE1-205ENST00000431889 PHRF1Q9P1Y6 1649 aaKnown RBP20.65■□□□□ 0.9
SMARCE1-205ENST00000431889 TOPAZ1Q8N9V7 1692 aa20.65■□□□□ 0.9
SMARCE1-205ENST00000431889 KIAA1210Q9ULL0 1709 aa20.65■□□□□ 0.9
SMARCE1-205ENST00000431889 BLMP54132 1417 aaPredicted RBP20.64■□□□□ 0.9
SMARCE1-205ENST00000431889 KIAA0232Q92628 1395 aa20.64■□□□□ 0.9
SMARCE1-205ENST00000431889 CABP2Q9NPB3 220 aa20.64■□□□□ 0.9
SMARCE1-205ENST00000431889 NEUROD1Q13562 356 aa20.63■□□□□ 0.89
SMARCE1-205ENST00000431889 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
SMARCE1-205ENST00000431889 ONECUT3O60422 494 aaPredicted RBP20.63■□□□□ 0.89
SMARCE1-205ENST00000431889 SRPK2P78362 688 aaKnown RBP20.63■□□□□ 0.89
SMARCE1-205ENST00000431889 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
SMARCE1-205ENST00000431889 USP35Q9P2H5 1018 aa20.62■□□□□ 0.89
SMARCE1-205ENST00000431889 QRICH2Q9H0J4 1663 aa20.61■□□□□ 0.89
SMARCE1-205ENST00000431889 SF3B2Q13435 895 aaKnown RBP20.61■□□□□ 0.89
SMARCE1-205ENST00000431889 L3MBTL2Q969R5 705 aa20.61■□□□□ 0.89
SMARCE1-205ENST00000431889 CCDC61Q9Y6R9 512 aa20.6■□□□□ 0.89
SMARCE1-205ENST00000431889 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
SMARCE1-205ENST00000431889 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
SMARCE1-205ENST00000431889 CENPJQ9HC77 1338 aaPredicted RBP20.59■□□□□ 0.89
SMARCE1-205ENST00000431889 ABTB2Q8N961 1025 aa20.59■□□□□ 0.89
SMARCE1-205ENST00000431889 ZBTB7CA1YPR0 619 aa20.58■□□□□ 0.88
SMARCE1-205ENST00000431889 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.88
SMARCE1-205ENST00000431889 POLR3AO14802 1390 aaPredicted RBP20.58■□□□□ 0.88
SMARCE1-205ENST00000431889 PLEKHG3A1L390 1219 aa20.55■□□□□ 0.88
SMARCE1-205ENST00000431889 PSDA5PKW4 1024 aaPredicted RBP20.55■□□□□ 0.88
SMARCE1-205ENST00000431889 NRKQ7Z2Y5 1582 aa20.55■□□□□ 0.88
SMARCE1-205ENST00000431889 EVA1CP58658 441 aa20.54■□□□□ 0.88
SMARCE1-205ENST00000431889 EN1Q05925 392 aaPredicted RBP20.54■□□□□ 0.88
SMARCE1-205ENST00000431889 CABP1Q9NZU7 370 aa20.54■□□□□ 0.88
SMARCE1-205ENST00000431889 SPATA31A1Q5TZJ5 1347 aa20.53■□□□□ 0.88
SMARCE1-205ENST00000431889 THSD7AQ9UPZ6 1657 aa20.53■□□□□ 0.88
SMARCE1-205ENST00000431889 TRPM1Q7Z4N2 1603 aa20.52■□□□□ 0.88
SMARCE1-205ENST00000431889 LARP1Q6PKG0 1096 aaKnown RBP20.52■□□□□ 0.88
SMARCE1-205ENST00000431889 CAMTA1Q9Y6Y1 1673 aa20.51■□□□□ 0.87
SMARCE1-205ENST00000431889 BAG6P46379 1132 aa20.49■□□□□ 0.87
SMARCE1-205ENST00000431889 SSH2Q76I76 1423 aa20.48■□□□□ 0.87
SMARCE1-205ENST00000431889 RGPD1P0DJD0 1748 aa20.48■□□□□ 0.87
SMARCE1-205ENST00000431889 TRIM37O94972 964 aa20.48■□□□□ 0.87
SMARCE1-205ENST00000431889 GCP02774 474 aa20.48■□□□□ 0.87
SMARCE1-205ENST00000431889 SOX12O15370 315 aa20.47■□□□□ 0.87
SMARCE1-205ENST00000431889 ROCK2O75116 1388 aaKnown RBP20.47■□□□□ 0.87
SMARCE1-205ENST00000431889 TNS1Q9HBL0 1735 aaKnown RBP20.47■□□□□ 0.87
SMARCE1-205ENST00000431889 NLRP13Q86W25 1043 aa20.46■□□□□ 0.87
SMARCE1-205ENST00000431889 LMO7Q8WWI1 1683 aa20.46■□□□□ 0.87
SMARCE1-205ENST00000431889 USP19O94966 1318 aa20.46■□□□□ 0.87
SMARCE1-205ENST00000431889 NLRP6P59044 892 aa20.46■□□□□ 0.87
SMARCE1-205ENST00000431889 EZH2Q15910 746 aaKnown RBP20.46■□□□□ 0.87
SMARCE1-205ENST00000431889 USP6P35125 1406 aa20.45■□□□□ 0.86
SMARCE1-205ENST00000431889 PIK3C2AO00443 1686 aa20.43■□□□□ 0.86
SMARCE1-205ENST00000431889 EVC2Q86UK5 1308 aa20.43■□□□□ 0.86
SMARCE1-205ENST00000431889 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
SMARCE1-205ENST00000431889 R3HDM1Q15032 1099 aaKnown RBP20.42■□□□□ 0.86
SMARCE1-205ENST00000431889 CPDO75976 1380 aa20.41■□□□□ 0.86
SMARCE1-205ENST00000431889 COL5A2P05997 1499 aaPredicted RBP20.4■□□□□ 0.86
SMARCE1-205ENST00000431889 APBA3O96018 575 aa20.4■□□□□ 0.86
SMARCE1-205ENST00000431889 TCP11L2Q8N4U5 519 aa20.4■□□□□ 0.86
SMARCE1-205ENST00000431889 RGPD5Q99666 1765 aa20.39■□□□□ 0.86
SMARCE1-205ENST00000431889 FAM196AQ6ZSG2 479 aa20.38■□□□□ 0.85
SMARCE1-205ENST00000431889 BARGINQ6ZT62 677 aa20.38■□□□□ 0.85
SMARCE1-205ENST00000431889 AKAP12Q02952 1782 aa20.38■□□□□ 0.85
SMARCE1-205ENST00000431889 AXIN2Q9Y2T1 843 aa20.38■□□□□ 0.85
SMARCE1-205ENST00000431889 SLIT3O75094 1523 aa20.37■□□□□ 0.85
SMARCE1-205ENST00000431889 TTC21BQ7Z4L5 1316 aa20.35■□□□□ 0.85
SMARCE1-205ENST00000431889 COL18A1P39060 1754 aa20.35■□□□□ 0.85
SMARCE1-205ENST00000431889 TOM1L2Q6ZVM7 507 aa20.35■□□□□ 0.85
SMARCE1-205ENST00000431889 CAMKK2Q96RR4 588 aa20.35■□□□□ 0.85
SMARCE1-205ENST00000431889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
SMARCE1-205ENST00000431889 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
SMARCE1-205ENST00000431889 CRB1P82279 1406 aa20.33■□□□□ 0.85
SMARCE1-205ENST00000431889 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.84
SMARCE1-205ENST00000431889 KTN1Q86UP2 1357 aaKnown RBP20.32■□□□□ 0.84
SMARCE1-205ENST00000431889 TMC1Q8TDI8 760 aa20.32■□□□□ 0.84
SMARCE1-205ENST00000431889 LRP5O75197 1615 aa20.31■□□□□ 0.84
SMARCE1-205ENST00000431889 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
SMARCE1-205ENST00000431889 PTF1AQ7RTS3 328 aa20.31■□□□□ 0.84
SMARCE1-205ENST00000431889 DISP2A7MBM2 1401 aa20.31■□□□□ 0.84
SMARCE1-205ENST00000431889 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
SMARCE1-205ENST00000431889 THRAP3Q9Y2W1 955 aaKnown RBP20.3■□□□□ 0.84
SMARCE1-205ENST00000431889 BRD4O60885 1362 aaPredicted RBP20.3■□□□□ 0.84
SMARCE1-205ENST00000431889 CPSF1Q10570 1443 aaKnown RBP20.3■□□□□ 0.84
SMARCE1-205ENST00000431889 CSB-PGBD3P0DP91 1061 aa20.29■□□□□ 0.84
SMARCE1-205ENST00000431889 NUP188Q5SRE5 1749 aa20.29■□□□□ 0.84
SMARCE1-205ENST00000431889 ARHGEF25Q86VW2 580 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms