RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
CDC40-204ENST00000431461 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
CDC40-204ENST00000431461 SOBPA7XYQ1 873 aa5.72□□□□□ -1.49
CDC40-204ENST00000431461 K7ELQ4 463 aaPredicted RBP5.72□□□□□ -1.49
CDC40-204ENST00000431461 HOXA2O43364 376 aa5.72□□□□□ -1.49
CDC40-204ENST00000431461 MAN1A2O60476 641 aa5.72□□□□□ -1.49
CDC40-204ENST00000431461 TIMP2P16035 220 aa5.72□□□□□ -1.49
CDC40-204ENST00000431461 MARSP56192 900 aaKnown RBP5.72□□□□□ -1.49
CDC40-204ENST00000431461 GUCA2AQ02747 115 aa5.72□□□□□ -1.49
CDC40-204ENST00000431461 RETREG3Q86VR2 466 aa5.72□□□□□ -1.49
CDC40-204ENST00000431461 SYMPKQ92797 1274 aaKnown RBP5.72□□□□□ -1.49
CDC40-204ENST00000431461 KLF16Q9BXK1 252 aaPredicted RBP5.72□□□□□ -1.49
CDC40-204ENST00000431461 CCNYL3P0C7X3 344 aa5.71□□□□□ -1.5
CDC40-204ENST00000431461 SPOCK3Q9BQ16 436 aa5.71□□□□□ -1.5
CDC40-204ENST00000431461 WDR4P57081 412 aaKnown RBP5.7□□□□□ -1.5
CDC40-204ENST00000431461 ZNF385CQ66K41 422 aaPredicted RBP5.7□□□□□ -1.5
CDC40-204ENST00000431461 EVA1BQ9NVM1 165 aa5.7□□□□□ -1.5
CDC40-204ENST00000431461 PTPRNQ16849 979 aa5.69□□□□□ -1.5
CDC40-204ENST00000431461 PLA2G4EQ3MJ16 856 aa5.69□□□□□ -1.5
CDC40-204ENST00000431461 GALNT6Q8NCL4 622 aa5.69□□□□□ -1.5
CDC40-204ENST00000431461 NANOS1Q8WY41 292 aaKnown RBP5.69□□□□□ -1.5
CDC40-204ENST00000431461 TLL2Q9Y6L7 1015 aa5.69□□□□□ -1.5
CDC40-204ENST00000431461 UPP2O95045 317 aa5.68□□□□□ -1.5
CDC40-204ENST00000431461 MS4A1P11836 297 aa5.68□□□□□ -1.5
CDC40-204ENST00000431461 LINC01559Q495D7 138 aa5.68□□□□□ -1.5
CDC40-204ENST00000431461 CDK15Q96Q40 435 aa5.68□□□□□ -1.5
CDC40-204ENST00000431461 UNC93B1Q9H1C4 597 aa5.68□□□□□ -1.5
CDC40-204ENST00000431461 PLCB2Q00722 1185 aa5.67□□□□□ -1.5
CDC40-204ENST00000431461 KRT76Q01546 638 aa5.67□□□□□ -1.5
CDC40-204ENST00000431461 NR5A1Q13285 461 aa5.67□□□□□ -1.5
CDC40-204ENST00000431461 GPIHBP1Q8IV16 184 aa5.67□□□□□ -1.5
CDC40-204ENST00000431461 ZNF511Q8NB15 262 aa5.67□□□□□ -1.5
CDC40-204ENST00000431461 FAM174AQ8TBP5 190 aa5.67□□□□□ -1.5
CDC40-204ENST00000431461 CNTNAP3BQ96NU0 1288 aa5.67□□□□□ -1.5
CDC40-204ENST00000431461 CNTNAP3Q9BZ76 1288 aa5.67□□□□□ -1.5
CDC40-204ENST00000431461 ARHGEF15O94989 841 aa5.66□□□□□ -1.5
CDC40-204ENST00000431461 SLURP2P0DP57 97 aa5.66□□□□□ -1.5
CDC40-204ENST00000431461 KCNH2Q12809 1159 aa5.66□□□□□ -1.5
CDC40-204ENST00000431461 BAP1Q92560 729 aa5.66□□□□□ -1.5
CDC40-204ENST00000431461 SPTLC1O15269 473 aa5.65□□□□□ -1.5
CDC40-204ENST00000431461 PROCP04070 461 aa5.65□□□□□ -1.5
CDC40-204ENST00000431461 MDM2Q00987 491 aaPredicted RBP5.65□□□□□ -1.5
CDC40-204ENST00000431461 DESI1Q6ICB0 168 aa5.65□□□□□ -1.5
CDC40-204ENST00000431461 SOS2Q07890 1332 aaPredicted RBP5.65□□□□□ -1.51
CDC40-204ENST00000431461 ZIC2O95409 532 aaPredicted RBP5.64□□□□□ -1.51
CDC40-204ENST00000431461 MAP2K5Q13163 448 aa5.64□□□□□ -1.51
CDC40-204ENST00000431461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.64□□□□□ -1.51
CDC40-204ENST00000431461 COL25A1Q9BXS0 654 aaPredicted RBP5.64□□□□□ -1.51
CDC40-204ENST00000431461 IRF6O14896 467 aa5.63□□□□□ -1.51
CDC40-204ENST00000431461 BMP2P12643 396 aa5.63□□□□□ -1.51
CDC40-204ENST00000431461 NUTM1Q86Y26 1132 aa5.63□□□□□ -1.51
CDC40-204ENST00000431461 LINC00528Q8N1L1 170 aa5.63□□□□□ -1.51
CDC40-204ENST00000431461 GPR161Q8N6U8 529 aaKnown RBP5.63□□□□□ -1.51
CDC40-204ENST00000431461 SPDYE5A6NIY4 337 aa5.62□□□□□ -1.51
CDC40-204ENST00000431461 C6orf118Q5T5N4 469 aa5.62□□□□□ -1.51
CDC40-204ENST00000431461 MEIOBQ8N635 442 aa5.62□□□□□ -1.51
CDC40-204ENST00000431461 ITPKCQ96DU7 683 aa5.62□□□□□ -1.51
CDC40-204ENST00000431461 TSEN34Q9BSV6 310 aaKnown RBP5.62□□□□□ -1.51
CDC40-204ENST00000431461 PHF20L1A8MW92 1017 aa5.61□□□□□ -1.51
CDC40-204ENST00000431461 C6orf229H3BNL8 230 aa5.61□□□□□ -1.51
CDC40-204ENST00000431461 FDX1P10109 184 aa5.61□□□□□ -1.51
CDC40-204ENST00000431461 MINK1Q8N4C8 1332 aaPredicted RBP5.61□□□□□ -1.51
CDC40-204ENST00000431461 DCAF5Q96JK2 942 aa5.61□□□□□ -1.51
CDC40-204ENST00000431461 DNMT3LQ9UJW3 386 aa5.61□□□□□ -1.51
CDC40-204ENST00000431461 ZFAND3Q9H8U3 227 aa5.6□□□□□ -1.51
CDC40-204ENST00000431461 PTSQ03393 145 aa5.59□□□□□ -1.51
CDC40-204ENST00000431461 ARID5BQ14865 1188 aa5.59□□□□□ -1.51
CDC40-204ENST00000431461 TTLL8A6PVC2 850 aa5.58□□□□□ -1.52
CDC40-204ENST00000431461 ITGB2P05107 769 aa5.58□□□□□ -1.52
CDC40-204ENST00000431461 CLCN1P35523 988 aa5.58□□□□□ -1.52
CDC40-204ENST00000431461 GRM5P41594 1212 aa5.58□□□□□ -1.52
CDC40-204ENST00000431461 GPCPD1Q9NPB8 672 aa5.58□□□□□ -1.52
CDC40-204ENST00000431461 ENAMQ9NRM1 1142 aa5.58□□□□□ -1.52
CDC40-204ENST00000431461 FAM217BQ9NTX9 383 aaPredicted RBP5.58□□□□□ -1.52
CDC40-204ENST00000431461 PCDHGC3Q9UN70 934 aa5.58□□□□□ -1.52
CDC40-204ENST00000431461 TULP1O00294 542 aaPredicted RBP5.57□□□□□ -1.52
CDC40-204ENST00000431461 NR3C2P08235 984 aa5.57□□□□□ -1.52
CDC40-204ENST00000431461 SV2AQ7L0J3 742 aa5.57□□□□□ -1.52
CDC40-204ENST00000431461 CCDC155Q8N6L0 562 aa5.57□□□□□ -1.52
CDC40-204ENST00000431461 WHAMMQ8TF30 809 aa5.57□□□□□ -1.52
CDC40-204ENST00000431461 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
CDC40-204ENST00000431461 KDM2AQ9Y2K7 1162 aa5.57□□□□□ -1.52
CDC40-204ENST00000431461 BAG6P46379 1132 aa5.56□□□□□ -1.52
CDC40-204ENST00000431461 MAP3K10Q02779 954 aa5.56□□□□□ -1.52
CDC40-204ENST00000431461 RNFT1Q5M7Z0 435 aa5.56□□□□□ -1.52
CDC40-204ENST00000431461 PRR7Q8TB68 274 aa5.56□□□□□ -1.52
CDC40-204ENST00000431461 MAP4K5Q9Y4K4 846 aa5.56□□□□□ -1.52
CDC40-204ENST00000431461 EMILIN1Q9Y6C2 1016 aa5.56□□□□□ -1.52
CDC40-204ENST00000431461 SLC35F4A4IF30 521 aa5.55□□□□□ -1.52
CDC40-204ENST00000431461 NDUFV2P19404 249 aa5.55□□□□□ -1.52
CDC40-204ENST00000431461 ITGA6P23229 1130 aa5.55□□□□□ -1.52
CDC40-204ENST00000431461 CTHP32929 405 aa5.55□□□□□ -1.52
CDC40-204ENST00000431461 SRSF11Q05519 484 aaKnown RBP5.55□□□□□ -1.52
CDC40-204ENST00000431461 LYPD8Q6UX82 237 aa5.55□□□□□ -1.52
CDC40-204ENST00000431461 BPHLQ86WA6 291 aaPredicted RBP5.55□□□□□ -1.52
CDC40-204ENST00000431461 CCDC102AQ96A19 550 aa5.55□□□□□ -1.52
CDC40-204ENST00000431461 GJA5P36382 358 aa5.54□□□□□ -1.52
CDC40-204ENST00000431461 HAP1P54257 671 aaPredicted RBP5.54□□□□□ -1.52
CDC40-204ENST00000431461 MTMR2Q13614 643 aa5.54□□□□□ -1.52
CDC40-204ENST00000431461 SPINT1O43278 529 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms