RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
TRERNA1-201ENST00000431460 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
TRERNA1-201ENST00000431460 TRPC5Q9UL62 973 aaPredicted RBP16.88■□□□□ 0.29
TRERNA1-201ENST00000431460 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
TRERNA1-201ENST00000431460 ATRNO75882 1429 aa16.87■□□□□ 0.29
TRERNA1-201ENST00000431460 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
TRERNA1-201ENST00000431460 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
TRERNA1-201ENST00000431460 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
TRERNA1-201ENST00000431460 PLCH1Q4KWH8 1693 aa16.85■□□□□ 0.29
TRERNA1-201ENST00000431460 PLEKHG3A1L390 1219 aa16.84■□□□□ 0.29
TRERNA1-201ENST00000431460 CABP1Q9NZU7 370 aa16.84■□□□□ 0.29
TRERNA1-201ENST00000431460 SLIT2O94813 1529 aa16.84■□□□□ 0.29
TRERNA1-201ENST00000431460 UNC5CLQ8IV45 518 aa16.83■□□□□ 0.28
TRERNA1-201ENST00000431460 CCDC9Q9Y3X0 531 aaKnown RBP16.83■□□□□ 0.28
TRERNA1-201ENST00000431460 CRYBG1Q9Y4K1 1723 aa16.82■□□□□ 0.28
TRERNA1-201ENST00000431460 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.82■□□□□ 0.28
TRERNA1-201ENST00000431460 ABTB2Q8N961 1025 aa16.81■□□□□ 0.28
TRERNA1-201ENST00000431460 PHRF1Q9P1Y6 1649 aaKnown RBP16.81■□□□□ 0.28
TRERNA1-201ENST00000431460 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
TRERNA1-201ENST00000431460 GJD4Q96KN9 370 aaPredicted RBP16.8■□□□□ 0.28
TRERNA1-201ENST00000431460 PRDM11Q9NQV5 511 aa16.79■□□□□ 0.28
TRERNA1-201ENST00000431460 GLI3P10071 1580 aa16.78■□□□□ 0.28
TRERNA1-201ENST00000431460 BTG4Q9NY30 223 aa16.78■□□□□ 0.28
TRERNA1-201ENST00000431460 NWD2Q9ULI1 1742 aa16.78■□□□□ 0.28
TRERNA1-201ENST00000431460 USP6P35125 1406 aa16.78■□□□□ 0.28
TRERNA1-201ENST00000431460 KIAA0232Q92628 1395 aa16.77■□□□□ 0.28
TRERNA1-201ENST00000431460 COL14A1Q05707 1796 aaKnown RBP16.77■□□□□ 0.28
TRERNA1-201ENST00000431460 ZC3H6P61129 1189 aaKnown RBP16.77■□□□□ 0.28
TRERNA1-201ENST00000431460 CHRNA2Q15822 529 aa16.77■□□□□ 0.28
TRERNA1-201ENST00000431460 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.27
TRERNA1-201ENST00000431460 ATAD2Q6PL18 1390 aa16.77■□□□□ 0.27
TRERNA1-201ENST00000431460 NRAPQ86VF7 1730 aa16.76■□□□□ 0.27
TRERNA1-201ENST00000431460 UPF1Q92900 1129 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRERNA1-201ENST00000431460 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
TRERNA1-201ENST00000431460 A0A0G2JS52 829 aa16.75■□□□□ 0.27
TRERNA1-201ENST00000431460 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
TRERNA1-201ENST00000431460 MYT1Q01538 1121 aa16.75■□□□□ 0.27
TRERNA1-201ENST00000431460 VPS72Q15906 364 aa16.75■□□□□ 0.27
TRERNA1-201ENST00000431460 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
TRERNA1-201ENST00000431460 ST20-MTHFSA0A0A6YYL1 179 aa16.73■□□□□ 0.27
TRERNA1-201ENST00000431460 NLRP13Q86W25 1043 aa16.73■□□□□ 0.27
TRERNA1-201ENST00000431460 PIK3C2AO00443 1686 aa16.72■□□□□ 0.27
TRERNA1-201ENST00000431460 NLRP6P59044 892 aa16.72■□□□□ 0.27
TRERNA1-201ENST00000431460 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
TRERNA1-201ENST00000431460 KTN1Q86UP2 1357 aaKnown RBP16.72■□□□□ 0.27
TRERNA1-201ENST00000431460 USP47Q96K76 1375 aa16.72■□□□□ 0.27
TRERNA1-201ENST00000431460 AKAP12Q02952 1782 aa16.72■□□□□ 0.27
TRERNA1-201ENST00000431460 USP19O94966 1318 aa16.71■□□□□ 0.27
TRERNA1-201ENST00000431460 SOX12O15370 315 aa16.71■□□□□ 0.27
TRERNA1-201ENST00000431460 BRD4O60885 1362 aaPredicted RBP16.7■□□□□ 0.26
TRERNA1-201ENST00000431460 FAM98CQ17RN3 349 aaKnown RBP16.7■□□□□ 0.26
TRERNA1-201ENST00000431460 SEPT12Q8IYM1 358 aa16.7■□□□□ 0.26
TRERNA1-201ENST00000431460 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
TRERNA1-201ENST00000431460 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
TRERNA1-201ENST00000431460 GCP02774 474 aa16.69■□□□□ 0.26
TRERNA1-201ENST00000431460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRERNA1-201ENST00000431460 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
TRERNA1-201ENST00000431460 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
TRERNA1-201ENST00000431460 TESK2Q96S53 571 aa16.68■□□□□ 0.26
TRERNA1-201ENST00000431460 SLC12A5Q9H2X9 1139 aa16.68■□□□□ 0.26
TRERNA1-201ENST00000431460 MON2Q7Z3U7 1717 aa16.67■□□□□ 0.26
TRERNA1-201ENST00000431460 SLC24A1O60721 1099 aa16.67■□□□□ 0.26
TRERNA1-201ENST00000431460 EVA1CP58658 441 aa16.67■□□□□ 0.26
TRERNA1-201ENST00000431460 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
TRERNA1-201ENST00000431460 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
TRERNA1-201ENST00000431460 SLIT3O75094 1523 aa16.66■□□□□ 0.26
TRERNA1-201ENST00000431460 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
TRERNA1-201ENST00000431460 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
TRERNA1-201ENST00000431460 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
TRERNA1-201ENST00000431460 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
TRERNA1-201ENST00000431460 CPDO75976 1380 aa16.65■□□□□ 0.26
TRERNA1-201ENST00000431460 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
TRERNA1-201ENST00000431460 ZRANB1Q9UGI0 708 aa16.65■□□□□ 0.26
TRERNA1-201ENST00000431460 CAMTA1Q9Y6Y1 1673 aa16.65■□□□□ 0.26
TRERNA1-201ENST00000431460 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
TRERNA1-201ENST00000431460 A0A1W2PP64 1363 aa16.64■□□□□ 0.26
TRERNA1-201ENST00000431460 EIF4G2P78344 907 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRERNA1-201ENST00000431460 LMO7Q8WWI1 1683 aa16.64■□□□□ 0.25
TRERNA1-201ENST00000431460 LARP1Q6PKG0 1096 aaKnown RBP16.63■□□□□ 0.25
TRERNA1-201ENST00000431460 NME9Q86XW9 330 aa16.63■□□□□ 0.25
TRERNA1-201ENST00000431460 TERF2IPQ9NYB0 399 aa16.63■□□□□ 0.25
TRERNA1-201ENST00000431460 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
TRERNA1-201ENST00000431460 EP400Q96L91 3159 aa16.63■□□□□ 0.25
TRERNA1-201ENST00000431460 TMF1P82094 1093 aa16.62■□□□□ 0.25
TRERNA1-201ENST00000431460 KRT27Q7Z3Y8 459 aa16.62■□□□□ 0.25
TRERNA1-201ENST00000431460 COL5A2P05997 1499 aaPredicted RBP16.61■□□□□ 0.25
TRERNA1-201ENST00000431460 EDC4Q6P2E9 1401 aaKnown RBP16.61■□□□□ 0.25
TRERNA1-201ENST00000431460 ONECUT3O60422 494 aaPredicted RBP16.6■□□□□ 0.25
TRERNA1-201ENST00000431460 HSPA5P11021 654 aaKnown RBP16.6■□□□□ 0.25
TRERNA1-201ENST00000431460 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
TRERNA1-201ENST00000431460 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
TRERNA1-201ENST00000431460 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
TRERNA1-201ENST00000431460 KCNH5Q8NCM2 988 aa16.59■□□□□ 0.25
TRERNA1-201ENST00000431460 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.24
TRERNA1-201ENST00000431460 NINLQ9Y2I6 1382 aa16.58■□□□□ 0.24
TRERNA1-201ENST00000431460 NFAT5O94916 1531 aa16.58■□□□□ 0.24
TRERNA1-201ENST00000431460 POLR3GLQ9BT43 218 aa16.57■□□□□ 0.24
TRERNA1-201ENST00000431460 TOM1L2Q6ZVM7 507 aa16.56■□□□□ 0.24
TRERNA1-201ENST00000431460 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
TRERNA1-201ENST00000431460 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms