RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZBBXA8MT70 800 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 CCNYL3P0C7X3 344 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 KCNH2Q12809 1159 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 PNMA1Q8ND90 353 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 GPKOWQ92917 476 aaPredicted RBP eCLIP5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 STAC3Q96MF2 364 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 SPSB2Q99619 263 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 PRDM9Q9NQV7 894 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 GPSM3Q9Y4H4 160 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 ZPR1O75312 459 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 ADH1BP00325 375 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 TJAP1Q5JTD0 557 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 PODXL2Q9NZ53 605 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 MYT1LQ9UL68 1186 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 MAFBQ9Y5Q3 323 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 EIF4G2P78344 907 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 PDXDC2PQ6P474 469 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 NFATC2IPQ8NCF5 419 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 NUDT12Q9BQG2 462 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 TFIP11Q9UBB9 837 aaKnown RBP5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 USTQ9Y2C2 406 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 ATP9BO43861 1147 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 TLL1O43897 1013 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 ATG7O95352 703 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 COPS2P61201 443 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 SEMA3FQ13275 785 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 MTRQ99707 1265 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 CHIC2Q9UKJ5 165 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 KANK4Q5T7N3 995 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 SH3BP5LQ7L8J4 393 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 SH3RF1Q7Z6J0 888 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 PHTF2Q8N3S3 785 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 KCTD17Q8N5Z5 321 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 ARMC2Q8NEN0 867 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 KCTD12Q96CX2 325 aaKnown RBP5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 TMEM88BA6NKF7 163 aa5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 PIK3CDO00329 1044 aa5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 LMOD1P29536 600 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 PTCRAQ6ISU1 281 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 PLEKHM2Q8IWE5 1019 aa5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 IL21Q9HBE4 155 aa5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 MCCD1P59942 119 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 ELOAQ14241 798 aaKnown RBP5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 NBPF14Q5TI25 921 aa5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 FAM174AQ8TBP5 190 aa5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 ZNF516Q92618 1163 aa5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 UNC93B1Q9H1C4 597 aa5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 ACIN1Q9UKV3 1341 aaKnown RBP5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 RFX1P22670 979 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 CTHP32929 405 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 PTK2Q05397 1052 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 PDE4CQ08493 712 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 CEP126Q9P2H0 1117 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 SLC6A16Q9GZN6 736 aa5.79□□□□□ -1.48
HMGB1P27-201ENST00000431429 ZBTB7CA1YPR0 619 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L3A6NCW0 530 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L4A6NCW7 530 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 TRAF7Q6Q0C0 670 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L2Q6R6M4 530 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L1Q7RTZ2 530 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 CDAN1Q8IWY9 1227 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 ADAM32Q8TC27 787 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 ZNF592Q92610 1267 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 C1QTNF2Q9BXJ5 285 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 ZMIZ1Q9ULJ6 1067 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L5A8MUK1 530 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 BRD1O95696 1058 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 ITGBL1O95965 494 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 POTEGQ6S5H5 508 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 NKX2-3Q8TAU0 364 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 FAM196BA6NMK8 535 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 LZTS3O60299 673 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 S1PR4O95977 384 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 CSB-PGBD3P0DP91 1061 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 ARHGAP9Q9BRR9 750 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 VRTNQ9H8Y1 702 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 DKK1O94907 266 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 SKIP12755 728 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 PTPN5P54829 565 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 KCNA1Q09470 495 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 ERFEQ4G0M1 354 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 TRMT44Q8IYL2 757 aaKnown RBP5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 ZNF511Q8NB15 262 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 PLPP7Q8NBV4 271 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 CARNS1A5YM72 827 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 ESPNB1AK53 854 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 FAM69CQ0P6D2 419 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 PTK7Q13308 1070 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 MAP7D1Q3KQU3 841 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 CRTC2Q53ET0 693 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 BAP1Q92560 729 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 FCF1Q9Y324 198 aaKnown RBP5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 PCDHB9Q9Y5E1 797 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 USP17L15C9J2P7 530 aa5.73□□□□□ -1.49
HMGB1P27-201ENST00000431429 PATL2C9JE40 543 aaKnown RBP5.73□□□□□ -1.49
HMGB1P27-201ENST00000431429 USP17L10C9JJH3 530 aa5.73□□□□□ -1.49
HMGB1P27-201ENST00000431429 USP17L13C9JLJ4 530 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms