RNA–Protein interactions for RNA: ENST00000431229.1

SIM2-202, Transcript of SIM bHLH transcription factor 2, humanhuman

TSL 1 (best)

Gene SIM2, Length 1,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-202ENST00000431229 ALS2Q96Q42 1657 aa24.07■■□□□ 1.44
SIM2-202ENST00000431229 KRT27Q7Z3Y8 459 aa24.07■■□□□ 1.44
SIM2-202ENST00000431229 BLMP54132 1417 aaPredicted RBP24.06■■□□□ 1.44
SIM2-202ENST00000431229 SF3B2Q13435 895 aaKnown RBP24.06■■□□□ 1.44
SIM2-202ENST00000431229 CDK19Q9BWU1 502 aa24.05■■□□□ 1.44
SIM2-202ENST00000431229 FAM182BQ5T319 152 aa24.04■■□□□ 1.44
SIM2-202ENST00000431229 HRCP23327 699 aa24.03■■□□□ 1.44
SIM2-202ENST00000431229 STAC3Q96MF2 364 aa24.03■■□□□ 1.44
SIM2-202ENST00000431229 PRDM11Q9NQV5 511 aa24.03■■□□□ 1.44
SIM2-202ENST00000431229 ATP7BP35670 1465 aa24.03■■□□□ 1.44
SIM2-202ENST00000431229 NRAPQ86VF7 1730 aa24.03■■□□□ 1.44
SIM2-202ENST00000431229 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
SIM2-202ENST00000431229 NBPF1Q3BBV0 1214 aa24.02■■□□□ 1.44
SIM2-202ENST00000431229 ONECUT3O60422 494 aaPredicted RBP24■■□□□ 1.43
SIM2-202ENST00000431229 COL14A1Q05707 1796 aaKnown RBP24■■□□□ 1.43
SIM2-202ENST00000431229 ZC3H6P61129 1189 aaKnown RBP23.99■■□□□ 1.43
SIM2-202ENST00000431229 STRN4Q9NRL3 753 aa23.99■■□□□ 1.43
SIM2-202ENST00000431229 ITSN1Q15811 1721 aa23.98■■□□□ 1.43
SIM2-202ENST00000431229 KIAA0232Q92628 1395 aa23.97■■□□□ 1.43
SIM2-202ENST00000431229 ACEP12821 1306 aa23.97■■□□□ 1.43
SIM2-202ENST00000431229 CRYBG1Q9Y4K1 1723 aa23.97■■□□□ 1.43
SIM2-202ENST00000431229 SPATA31A5Q5VU36 1347 aa23.96■■□□□ 1.43
SIM2-202ENST00000431229 SPATA31A7Q8IWB4 1347 aa23.96■■□□□ 1.43
SIM2-202ENST00000431229 SRPK2P78362 688 aaKnown RBP23.94■■□□□ 1.42
SIM2-202ENST00000431229 NBPF8Q3BBV2 869 aa23.94■■□□□ 1.42
SIM2-202ENST00000431229 USP35Q9P2H5 1018 aa23.94■■□□□ 1.42
SIM2-202ENST00000431229 PSDA5PKW4 1024 aaPredicted RBP23.92■■□□□ 1.42
SIM2-202ENST00000431229 CABP2Q9NPB3 220 aa23.92■■□□□ 1.42
SIM2-202ENST00000431229 CCDC61Q9Y6R9 512 aa23.92■■□□□ 1.42
SIM2-202ENST00000431229 PHRF1Q9P1Y6 1649 aaKnown RBP23.91■■□□□ 1.42
SIM2-202ENST00000431229 BAG6P46379 1132 aa23.9■■□□□ 1.42
SIM2-202ENST00000431229 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
SIM2-202ENST00000431229 TOPAZ1Q8N9V7 1692 aa23.9■■□□□ 1.42
SIM2-202ENST00000431229 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.42
SIM2-202ENST00000431229 KIAA1210Q9ULL0 1709 aa23.89■■□□□ 1.41
SIM2-202ENST00000431229 POLR3AO14802 1390 aaPredicted RBP23.89■■□□□ 1.41
SIM2-202ENST00000431229 EN1Q05925 392 aaPredicted RBP23.88■■□□□ 1.41
SIM2-202ENST00000431229 CENPJQ9HC77 1338 aaPredicted RBP23.88■■□□□ 1.41
SIM2-202ENST00000431229 EVA1CP58658 441 aa23.87■■□□□ 1.41
SIM2-202ENST00000431229 SPATA31A1Q5TZJ5 1347 aa23.87■■□□□ 1.41
SIM2-202ENST00000431229 PPIP5K1Q6PFW1 1433 aa23.87■■□□□ 1.41
SIM2-202ENST00000431229 PLEKHG3A1L390 1219 aa23.87■■□□□ 1.41
SIM2-202ENST00000431229 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
SIM2-202ENST00000431229 THSD7AQ9UPZ6 1657 aa23.85■■□□□ 1.41
SIM2-202ENST00000431229 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
SIM2-202ENST00000431229 L3MBTL2Q969R5 705 aa23.83■■□□□ 1.41
SIM2-202ENST00000431229 LARP1Q6PKG0 1096 aaKnown RBP23.82■■□□□ 1.4
SIM2-202ENST00000431229 NRKQ7Z2Y5 1582 aa23.82■■□□□ 1.4
SIM2-202ENST00000431229 QRICH2Q9H0J4 1663 aa23.82■■□□□ 1.4
SIM2-202ENST00000431229 TRIM37O94972 964 aa23.81■■□□□ 1.4
SIM2-202ENST00000431229 SSH2Q76I76 1423 aa23.81■■□□□ 1.4
SIM2-202ENST00000431229 CABP1Q9NZU7 370 aa23.81■■□□□ 1.4
SIM2-202ENST00000431229 RGPD1P0DJD0 1748 aa23.79■■□□□ 1.4
SIM2-202ENST00000431229 CAMTA1Q9Y6Y1 1673 aa23.79■■□□□ 1.4
SIM2-202ENST00000431229 EZH2Q15910 746 aaKnown RBP23.78■■□□□ 1.4
SIM2-202ENST00000431229 NLRP13Q86W25 1043 aa23.78■■□□□ 1.4
SIM2-202ENST00000431229 USP19O94966 1318 aa23.77■■□□□ 1.4
SIM2-202ENST00000431229 GCP02774 474 aa23.77■■□□□ 1.4
SIM2-202ENST00000431229 R3HDM1Q15032 1099 aaKnown RBP23.77■■□□□ 1.4
SIM2-202ENST00000431229 PDE3BQ13370 1112 aa23.76■■□□□ 1.39
SIM2-202ENST00000431229 NLRP6P59044 892 aa23.75■■□□□ 1.39
SIM2-202ENST00000431229 TNS1Q9HBL0 1735 aaKnown RBP23.75■■□□□ 1.39
SIM2-202ENST00000431229 FAM196AQ6ZSG2 479 aa23.75■■□□□ 1.39
SIM2-202ENST00000431229 APBA3O96018 575 aa23.74■■□□□ 1.39
SIM2-202ENST00000431229 TCP11L2Q8N4U5 519 aa23.74■■□□□ 1.39
SIM2-202ENST00000431229 SOX12O15370 315 aa23.73■■□□□ 1.39
SIM2-202ENST00000431229 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
SIM2-202ENST00000431229 CPDO75976 1380 aa23.73■■□□□ 1.39
SIM2-202ENST00000431229 USP6P35125 1406 aa23.72■■□□□ 1.39
SIM2-202ENST00000431229 ROCK2O75116 1388 aaKnown RBP23.72■■□□□ 1.39
SIM2-202ENST00000431229 EVC2Q86UK5 1308 aa23.71■■□□□ 1.39
SIM2-202ENST00000431229 BARGINQ6ZT62 677 aa23.71■■□□□ 1.39
SIM2-202ENST00000431229 TRPM1Q7Z4N2 1603 aa23.7■■□□□ 1.38
SIM2-202ENST00000431229 COL5A2P05997 1499 aaPredicted RBP23.69■■□□□ 1.38
SIM2-202ENST00000431229 CAMKK2Q96RR4 588 aa23.68■■□□□ 1.38
SIM2-202ENST00000431229 LRP5O75197 1615 aa23.67■■□□□ 1.38
SIM2-202ENST00000431229 DISP2A7MBM2 1401 aa23.67■■□□□ 1.38
SIM2-202ENST00000431229 PIK3C2AO00443 1686 aa23.65■■□□□ 1.38
SIM2-202ENST00000431229 TOM1L2Q6ZVM7 507 aa23.64■■□□□ 1.38
SIM2-202ENST00000431229 CRB1P82279 1406 aa23.63■■□□□ 1.37
SIM2-202ENST00000431229 SLIT3O75094 1523 aa23.63■■□□□ 1.37
SIM2-202ENST00000431229 AXIN2Q9Y2T1 843 aa23.62■■□□□ 1.37
SIM2-202ENST00000431229 THRAP3Q9Y2W1 955 aaKnown RBP23.62■■□□□ 1.37
SIM2-202ENST00000431229 TTC21BQ7Z4L5 1316 aa23.62■■□□□ 1.37
SIM2-202ENST00000431229 BRD4O60885 1362 aaPredicted RBP23.62■■□□□ 1.37
SIM2-202ENST00000431229 AATKQ6ZMQ8 1374 aa23.61■■□□□ 1.37
SIM2-202ENST00000431229 CSB-PGBD3P0DP91 1061 aa23.58■■□□□ 1.37
SIM2-202ENST00000431229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.58■■□□□ 1.37
SIM2-202ENST00000431229 PARP4Q9UKK3 1724 aaKnown RBP23.58■■□□□ 1.36
SIM2-202ENST00000431229 KTN1Q86UP2 1357 aaKnown RBP23.57■■□□□ 1.36
SIM2-202ENST00000431229 DDB1Q16531 1140 aa23.57■■□□□ 1.36
SIM2-202ENST00000431229 CPSF1Q10570 1443 aaKnown RBP23.57■■□□□ 1.36
SIM2-202ENST00000431229 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
SIM2-202ENST00000431229 PTF1AQ7RTS3 328 aa23.56■■□□□ 1.36
SIM2-202ENST00000431229 CARD11Q9BXL7 1154 aa23.56■■□□□ 1.36
SIM2-202ENST00000431229 COL18A1P39060 1754 aa23.55■■□□□ 1.36
SIM2-202ENST00000431229 AKAP12Q02952 1782 aa23.55■■□□□ 1.36
SIM2-202ENST00000431229 WDR17Q8IZU2 1322 aa23.55■■□□□ 1.36
SIM2-202ENST00000431229 ARHGEF25Q86VW2 580 aa23.55■■□□□ 1.36
SIM2-202ENST00000431229 TMC1Q8TDI8 760 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms