RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 USP21Q9UK80 565 aa11.95□□□□□ -0.5
ECHDC1-207ENST00000430841 PTPRUQ92729 1446 aa11.94□□□□□ -0.5
ECHDC1-207ENST00000430841 NALCNQ8IZF0 1738 aa11.94□□□□□ -0.5
ECHDC1-207ENST00000430841 ITGAEP38570 1179 aa11.94□□□□□ -0.5
ECHDC1-207ENST00000430841 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
ECHDC1-207ENST00000430841 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
ECHDC1-207ENST00000430841 ROCK1Q13464 1354 aa11.92□□□□□ -0.5
ECHDC1-207ENST00000430841 DDX17Q92841 729 aaKnown RBP11.92□□□□□ -0.5
ECHDC1-207ENST00000430841 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
ECHDC1-207ENST00000430841 NRXN3Q9Y4C0 1643 aa11.92□□□□□ -0.5
ECHDC1-207ENST00000430841 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
ECHDC1-207ENST00000430841 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
ECHDC1-207ENST00000430841 KIF1BO60333 1816 aa11.9□□□□□ -0.5
ECHDC1-207ENST00000430841 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
ECHDC1-207ENST00000430841 METP08581 1390 aa11.9□□□□□ -0.5
ECHDC1-207ENST00000430841 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
ECHDC1-207ENST00000430841 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
ECHDC1-207ENST00000430841 NPHP3Q7Z494 1330 aa11.88□□□□□ -0.51
ECHDC1-207ENST00000430841 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
ECHDC1-207ENST00000430841 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
ECHDC1-207ENST00000430841 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
ECHDC1-207ENST00000430841 LRPPRCP42704 1394 aaKnown RBP11.87□□□□□ -0.51
ECHDC1-207ENST00000430841 NEXMIFQ5QGS0 1516 aa11.86□□□□□ -0.51
ECHDC1-207ENST00000430841 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
ECHDC1-207ENST00000430841 LAMC1P11047 1609 aa11.86□□□□□ -0.51
ECHDC1-207ENST00000430841 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
ECHDC1-207ENST00000430841 ATRNO75882 1429 aa11.86□□□□□ -0.51
ECHDC1-207ENST00000430841 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
ECHDC1-207ENST00000430841 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
ECHDC1-207ENST00000430841 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
ECHDC1-207ENST00000430841 SOS2Q07890 1332 aaPredicted RBP11.85□□□□□ -0.51
ECHDC1-207ENST00000430841 MARF1Q9Y4F3 1742 aaKnown RBP11.84□□□□□ -0.51
ECHDC1-207ENST00000430841 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
ECHDC1-207ENST00000430841 A0A0G2JS52 829 aa11.84□□□□□ -0.51
ECHDC1-207ENST00000430841 MYT1Q01538 1121 aa11.84□□□□□ -0.51
ECHDC1-207ENST00000430841 ORAI2Q96SN7 254 aa11.84□□□□□ -0.51
ECHDC1-207ENST00000430841 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
ECHDC1-207ENST00000430841 FNBP4Q8N3X1 1017 aaPredicted RBP11.83□□□□□ -0.52
ECHDC1-207ENST00000430841 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.52
ECHDC1-207ENST00000430841 CCDC9Q9Y3X0 531 aaKnown RBP11.83□□□□□ -0.52
ECHDC1-207ENST00000430841 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
ECHDC1-207ENST00000430841 CDC42BPGQ6DT37 1551 aa11.82□□□□□ -0.52
ECHDC1-207ENST00000430841 ROBO2Q9HCK4 1378 aa11.81□□□□□ -0.52
ECHDC1-207ENST00000430841 PYGBP11216 843 aa11.81□□□□□ -0.52
ECHDC1-207ENST00000430841 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-207ENST00000430841 MYOM2P54296 1465 aa11.81□□□□□ -0.52
ECHDC1-207ENST00000430841 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.8□□□□□ -0.52
ECHDC1-207ENST00000430841 XPCQ01831 940 aaPredicted RBP11.8□□□□□ -0.52
ECHDC1-207ENST00000430841 SNPHO15079 494 aa11.79□□□□□ -0.52
ECHDC1-207ENST00000430841 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
ECHDC1-207ENST00000430841 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
ECHDC1-207ENST00000430841 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
ECHDC1-207ENST00000430841 EP400Q96L91 3159 aa11.79□□□□□ -0.52
ECHDC1-207ENST00000430841 CCDC144AA2RUR9 1427 aa11.78□□□□□ -0.52
ECHDC1-207ENST00000430841 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
ECHDC1-207ENST00000430841 FOXO3O43524 673 aa11.78□□□□□ -0.52
ECHDC1-207ENST00000430841 UNC5CLQ8IV45 518 aa11.78□□□□□ -0.52
ECHDC1-207ENST00000430841 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
ECHDC1-207ENST00000430841 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.53
ECHDC1-207ENST00000430841 NAIPQ13075 1403 aa11.77□□□□□ -0.53
ECHDC1-207ENST00000430841 BCL9LQ86UU0 1499 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 RALGAPBQ86X10 1494 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 PXDNQ92626 1479 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 USP32Q8NFA0 1604 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 BAG6P46379 1132 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 EMP3P54852 163 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 STK26Q9P289 416 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 PPLO60437 1756 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 PRAG1Q86YV5 1406 aa11.76□□□□□ -0.53
ECHDC1-207ENST00000430841 PSME1Q06323 249 aa11.75□□□□□ -0.53
ECHDC1-207ENST00000430841 LRP5O75197 1615 aa11.75□□□□□ -0.53
ECHDC1-207ENST00000430841 FAM205CA6NFA0 338 aa11.73□□□□□ -0.53
ECHDC1-207ENST00000430841 GLI3P10071 1580 aa11.73□□□□□ -0.53
ECHDC1-207ENST00000430841 SEPT12Q8IYM1 358 aa11.73□□□□□ -0.53
ECHDC1-207ENST00000430841 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
ECHDC1-207ENST00000430841 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
ECHDC1-207ENST00000430841 KRT27Q7Z3Y8 459 aa11.72□□□□□ -0.53
ECHDC1-207ENST00000430841 DEFB132Q7Z7B7 95 aa11.72□□□□□ -0.53
ECHDC1-207ENST00000430841 BRWD3Q6RI45 1802 aa11.72□□□□□ -0.53
ECHDC1-207ENST00000430841 SLIT2O94813 1529 aa11.71□□□□□ -0.53
ECHDC1-207ENST00000430841 TNS3Q68CZ2 1445 aa11.71□□□□□ -0.53
ECHDC1-207ENST00000430841 RRBP1Q9P2E9 1410 aaKnown RBP11.71□□□□□ -0.53
ECHDC1-207ENST00000430841 ARHGEF10O15013 1369 aa11.71□□□□□ -0.53
ECHDC1-207ENST00000430841 SPATA31A3Q5VYP0 1347 aa11.71□□□□□ -0.53
ECHDC1-207ENST00000430841 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.53
ECHDC1-207ENST00000430841 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
ECHDC1-207ENST00000430841 FMN2Q9NZ56 1722 aa11.71□□□□□ -0.54
ECHDC1-207ENST00000430841 NWD2Q9ULI1 1742 aa11.71□□□□□ -0.54
ECHDC1-207ENST00000430841 KNDC1Q76NI1 1749 aa11.7□□□□□ -0.54
ECHDC1-207ENST00000430841 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-207ENST00000430841 VPS72Q15906 364 aa11.7□□□□□ -0.54
ECHDC1-207ENST00000430841 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
ECHDC1-207ENST00000430841 IFT172Q9UG01 1749 aa11.69□□□□□ -0.54
ECHDC1-207ENST00000430841 ANKRD30BQ9BXX2 1392 aa11.69□□□□□ -0.54
ECHDC1-207ENST00000430841 RGL3Q3MIN7 710 aa11.68□□□□□ -0.54
ECHDC1-207ENST00000430841 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
ECHDC1-207ENST00000430841 WAPLQ7Z5K2 1190 aa11.68□□□□□ -0.54
ECHDC1-207ENST00000430841 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
ECHDC1-207ENST00000430841 RGPD1P0DJD0 1748 aa11.68□□□□□ -0.54
ECHDC1-207ENST00000430841 ADGRB2O60241 1585 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms