RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 NINLQ9Y2I6 1382 aa35■■■■□ 3.19
CPNE1-212ENST00000430570 SSH2Q76I76 1423 aa34.99■■■■□ 3.19
CPNE1-212ENST00000430570 COL22A1Q8NFW1 1626 aaPredicted RBP34.99■■■■□ 3.19
CPNE1-212ENST00000430570 KTN1Q86UP2 1357 aaKnown RBP34.99■■■■□ 3.19
CPNE1-212ENST00000430570 LRP6O75581 1613 aa34.97■■■■□ 3.19
CPNE1-212ENST00000430570 PLEKHG5O94827 1062 aa34.97■■■■□ 3.19
CPNE1-212ENST00000430570 HDGFL2Q7Z4V5 671 aaPredicted RBP34.97■■■■□ 3.19
CPNE1-212ENST00000430570 A0A1W2PP64 1363 aa34.97■■■■□ 3.19
CPNE1-212ENST00000430570 ARHGEF10O15013 1369 aa34.97■■■■□ 3.19
CPNE1-212ENST00000430570 TERF2IPQ9NYB0 399 aa34.96■■■■□ 3.19
CPNE1-212ENST00000430570 BRD4O60885 1362 aaPredicted RBP34.95■■■■□ 3.19
CPNE1-212ENST00000430570 CABLES1Q8TDN4 633 aa34.95■■■■□ 3.19
CPNE1-212ENST00000430570 NUTM2GQ5VZR2 741 aa34.94■■■■□ 3.18
CPNE1-212ENST00000430570 MED1Q15648 1581 aaPredicted RBP34.94■■■■□ 3.18
CPNE1-212ENST00000430570 TTC21BQ7Z4L5 1316 aa34.94■■■■□ 3.18
CPNE1-212ENST00000430570 MON2Q7Z3U7 1717 aa34.94■■■■□ 3.18
CPNE1-212ENST00000430570 MYOM1P52179 1685 aa34.93■■■■□ 3.18
CPNE1-212ENST00000430570 ABTB2Q8N961 1025 aa34.92■■■■□ 3.18
CPNE1-212ENST00000430570 KIF7Q2M1P5 1343 aa34.91■■■■□ 3.18
CPNE1-212ENST00000430570 NRKQ7Z2Y5 1582 aa34.9■■■■□ 3.18
CPNE1-212ENST00000430570 ANKRD36BQ8N2N9 1353 aa34.9■■■■□ 3.18
CPNE1-212ENST00000430570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.87■■■■□ 3.17
CPNE1-212ENST00000430570 ADAMTS2O95450 1211 aa34.86■■■■□ 3.17
CPNE1-212ENST00000430570 EDC4Q6P2E9 1401 aaKnown RBP34.84■■■■□ 3.17
CPNE1-212ENST00000430570 TTC21AQ8NDW8 1320 aa34.84■■■■□ 3.17
CPNE1-212ENST00000430570 PIK3C2AO00443 1686 aa34.83■■■■□ 3.17
CPNE1-212ENST00000430570 NLRP6P59044 892 aa34.82■■■■□ 3.17
CPNE1-212ENST00000430570 MEX3CQ5U5Q3 659 aaKnown RBP34.82■■■■□ 3.17
CPNE1-212ENST00000430570 CARD14Q9BXL6 1004 aa34.82■■■■□ 3.17
CPNE1-212ENST00000430570 WASHC2AQ641Q2 1341 aa34.82■■■■□ 3.16
CPNE1-212ENST00000430570 ABCA3Q99758 1704 aa34.82■■■■□ 3.16
CPNE1-212ENST00000430570 ZRANB1Q9UGI0 708 aa34.81■■■■□ 3.16
CPNE1-212ENST00000430570 CRYBG1Q9Y4K1 1723 aa34.81■■■■□ 3.16
CPNE1-212ENST00000430570 CCDC7Q96M83 1385 aa34.81■■■■□ 3.16
CPNE1-212ENST00000430570 NLRP13Q86W25 1043 aa34.81■■■■□ 3.16
CPNE1-212ENST00000430570 NME9Q86XW9 330 aa34.81■■■■□ 3.16
CPNE1-212ENST00000430570 HAP1P54257 671 aaPredicted RBP34.8■■■■□ 3.16
CPNE1-212ENST00000430570 USP19O94966 1318 aa34.77■■■■□ 3.16
CPNE1-212ENST00000430570 PANK3Q9H999 370 aa34.77■■■■□ 3.16
CPNE1-212ENST00000430570 C8orf37Q96NL8 207 aa34.76■■■■□ 3.15
CPNE1-212ENST00000430570 PHRF1Q9P1Y6 1649 aaKnown RBP34.74■■■■□ 3.15
CPNE1-212ENST00000430570 MARF1Q9Y4F3 1742 aaKnown RBP34.73■■■■□ 3.15
CPNE1-212ENST00000430570 NSD3Q9BZ95 1437 aa34.72■■■■□ 3.15
CPNE1-212ENST00000430570 USP31Q70CQ4 1352 aa34.72■■■■□ 3.15
CPNE1-212ENST00000430570 PHF23Q9BUL5 403 aaPredicted RBP34.71■■■■□ 3.15
CPNE1-212ENST00000430570 RGS17Q9UGC6 210 aaPredicted RBP34.71■■■■□ 3.15
CPNE1-212ENST00000430570 GCP02774 474 aa34.7■■■■□ 3.15
CPNE1-212ENST00000430570 NGLY1Q96IV0 654 aa34.7■■■■□ 3.15
CPNE1-212ENST00000430570 FYB1O15117 783 aa34.69■■■■□ 3.14
CPNE1-212ENST00000430570 SLIT3O75094 1523 aa34.68■■■■□ 3.14
CPNE1-212ENST00000430570 ZC3H6P61129 1189 aaKnown RBP34.68■■■■□ 3.14
CPNE1-212ENST00000430570 AFF2P51816 1311 aa34.67■■■■□ 3.14
CPNE1-212ENST00000430570 FAM83GA6ND36 823 aa34.66■■■■□ 3.14
CPNE1-212ENST00000430570 GGNBP2Q9H3C7 697 aa34.65■■■■□ 3.14
CPNE1-212ENST00000430570 USP54Q70EL1 1684 aa34.65■■■■□ 3.14
CPNE1-212ENST00000430570 OVOS2A0A0J9YW53 1432 aa34.65■■■■□ 3.14
CPNE1-212ENST00000430570 OVOS2Q6IE36 1432 aa34.65■■■■□ 3.14
CPNE1-212ENST00000430570 SOX12O15370 315 aa34.64■■■■□ 3.14
CPNE1-212ENST00000430570 KIAA0232Q92628 1395 aa34.64■■■■□ 3.14
CPNE1-212ENST00000430570 FNBP4Q8N3X1 1017 aaPredicted RBP34.63■■■■□ 3.13
CPNE1-212ENST00000430570 CHRNA2Q15822 529 aa34.6■■■■□ 3.13
CPNE1-212ENST00000430570 COG3Q96JB2 828 aa34.6■■■■□ 3.13
CPNE1-212ENST00000430570 PRDM11Q9NQV5 511 aa34.6■■■■□ 3.13
CPNE1-212ENST00000430570 KCNH5Q8NCM2 988 aa34.59■■■■□ 3.13
CPNE1-212ENST00000430570 KIF20BQ96Q89 1820 aa34.59■■■■□ 3.13
CPNE1-212ENST00000430570 SLIT2O94813 1529 aa34.58■■■■□ 3.13
CPNE1-212ENST00000430570 USP21Q9UK80 565 aa34.57■■■■□ 3.13
CPNE1-212ENST00000430570 CPDO75976 1380 aa34.57■■■■□ 3.12
CPNE1-212ENST00000430570 CGNL1Q0VF96 1302 aa34.57■■■■□ 3.12
CPNE1-212ENST00000430570 NFAT5O94916 1531 aa34.56■■■■□ 3.12
CPNE1-212ENST00000430570 POTEAQ6S8J7 498 aa34.55■■■■□ 3.12
CPNE1-212ENST00000430570 BCL9LQ86UU0 1499 aa34.55■■■■□ 3.12
CPNE1-212ENST00000430570 ZBTB7CA1YPR0 619 aa34.55■■■■□ 3.12
CPNE1-212ENST00000430570 PER1O15534 1290 aaPredicted RBP34.55■■■■□ 3.12
CPNE1-212ENST00000430570 FBLN1P23142 703 aa34.55■■■■□ 3.12
CPNE1-212ENST00000430570 ZNF772Q68DY9 489 aaPredicted RBP34.55■■■■□ 3.12
CPNE1-212ENST00000430570 COL14A1Q05707 1796 aaKnown RBP34.54■■■■□ 3.12
CPNE1-212ENST00000430570 ARHGEF25Q86VW2 580 aa34.54■■■■□ 3.12
CPNE1-212ENST00000430570 PLCH1Q4KWH8 1693 aa34.53■■■■□ 3.12
CPNE1-212ENST00000430570 BTG4Q9NY30 223 aa34.53■■■■□ 3.12
CPNE1-212ENST00000430570 KNSTRNQ9Y448 316 aa34.53■■■■□ 3.12
CPNE1-212ENST00000430570 UNC5CLQ8IV45 518 aa34.5■■■■□ 3.11
CPNE1-212ENST00000430570 QTRT2Q9H974 415 aaKnown RBP34.49■■■■□ 3.11
CPNE1-212ENST00000430570 AMER1Q5JTC6 1135 aaPredicted RBP34.48■■■■□ 3.11
CPNE1-212ENST00000430570 NWD2Q9ULI1 1742 aa34.47■■■■□ 3.11
CPNE1-212ENST00000430570 COL18A1P39060 1754 aa34.46■■■■□ 3.11
CPNE1-212ENST00000430570 LMO7Q8WWI1 1683 aa34.46■■■■□ 3.11
CPNE1-212ENST00000430570 CAMTA1Q9Y6Y1 1673 aa34.46■■■■□ 3.11
CPNE1-212ENST00000430570 AATKQ6ZMQ8 1374 aa34.45■■■■□ 3.11
CPNE1-212ENST00000430570 AXIN2Q9Y2T1 843 aa34.44■■■■□ 3.1
CPNE1-212ENST00000430570 NRAPQ86VF7 1730 aa34.44■■■■□ 3.1
CPNE1-212ENST00000430570 TRPC5Q9UL62 973 aaPredicted RBP34.43■■■■□ 3.1
CPNE1-212ENST00000430570 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.42■■■■□ 3.1
CPNE1-212ENST00000430570 ATRNO75882 1429 aa34.42■■■■□ 3.1
CPNE1-212ENST00000430570 RRS1Q15050 365 aaKnown RBP34.41■■■■□ 3.1
CPNE1-212ENST00000430570 ANKRD26Q9UPS8 1709 aa34.41■■■■□ 3.1
CPNE1-212ENST00000430570 LTN1O94822 1766 aa34.41■■■■□ 3.1
CPNE1-212ENST00000430570 NSD2O96028 1365 aa34.41■■■■□ 3.1
CPNE1-212ENST00000430570 MAP3K19Q56UN5 1328 aa34.4■■■■□ 3.1
CPNE1-212ENST00000430570 STRN4Q9NRL3 753 aa34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms