RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
HDAC4-202ENST00000430200 POLR3AO14802 1390 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-202ENST00000430200 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
HDAC4-202ENST00000430200 UNC5CLQ8IV45 518 aa17.14■□□□□ 0.33
HDAC4-202ENST00000430200 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
HDAC4-202ENST00000430200 GJD4Q96KN9 370 aaPredicted RBP17.14■□□□□ 0.33
HDAC4-202ENST00000430200 TNS1Q9HBL0 1735 aaKnown RBP17.13■□□□□ 0.33
HDAC4-202ENST00000430200 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
HDAC4-202ENST00000430200 CDK19Q9BWU1 502 aa17.12■□□□□ 0.33
HDAC4-202ENST00000430200 MON2Q7Z3U7 1717 aa17.12■□□□□ 0.33
HDAC4-202ENST00000430200 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
HDAC4-202ENST00000430200 WNK3Q9BYP7 1800 aa17.11■□□□□ 0.33
HDAC4-202ENST00000430200 PPIP5K1Q6PFW1 1433 aa17.11■□□□□ 0.33
HDAC4-202ENST00000430200 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-202ENST00000430200 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
HDAC4-202ENST00000430200 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-202ENST00000430200 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
HDAC4-202ENST00000430200 ACEP12821 1306 aa17.08■□□□□ 0.32
HDAC4-202ENST00000430200 VPS72Q15906 364 aa17.08■□□□□ 0.32
HDAC4-202ENST00000430200 COL18A1P39060 1754 aa17.07■□□□□ 0.32
HDAC4-202ENST00000430200 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
HDAC4-202ENST00000430200 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
HDAC4-202ENST00000430200 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
HDAC4-202ENST00000430200 SLIT3O75094 1523 aa17.06■□□□□ 0.32
HDAC4-202ENST00000430200 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
HDAC4-202ENST00000430200 USP54Q70EL1 1684 aa17.05■□□□□ 0.32
HDAC4-202ENST00000430200 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
HDAC4-202ENST00000430200 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
HDAC4-202ENST00000430200 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
HDAC4-202ENST00000430200 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
HDAC4-202ENST00000430200 BTG4Q9NY30 223 aa17.05■□□□□ 0.32
HDAC4-202ENST00000430200 PLEKHG3A1L390 1219 aa17.04■□□□□ 0.32
HDAC4-202ENST00000430200 USP6P35125 1406 aa17.04■□□□□ 0.32
HDAC4-202ENST00000430200 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
HDAC4-202ENST00000430200 ROCK2O75116 1388 aaKnown RBP17.03■□□□□ 0.32
HDAC4-202ENST00000430200 USP19O94966 1318 aa17.03■□□□□ 0.32
HDAC4-202ENST00000430200 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
HDAC4-202ENST00000430200 CCDC61Q9Y6R9 512 aa17.03■□□□□ 0.32
HDAC4-202ENST00000430200 PARP4Q9UKK3 1724 aaKnown RBP17.02■□□□□ 0.32
HDAC4-202ENST00000430200 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
HDAC4-202ENST00000430200 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
HDAC4-202ENST00000430200 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
HDAC4-202ENST00000430200 ONECUT3O60422 494 aaPredicted RBP17■□□□□ 0.31
HDAC4-202ENST00000430200 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
HDAC4-202ENST00000430200 LTN1O94822 1766 aa17■□□□□ 0.31
HDAC4-202ENST00000430200 SPATA31A5Q5VU36 1347 aa16.99■□□□□ 0.31
HDAC4-202ENST00000430200 SPATA31A7Q8IWB4 1347 aa16.99■□□□□ 0.31
HDAC4-202ENST00000430200 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
HDAC4-202ENST00000430200 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
HDAC4-202ENST00000430200 CCDC9Q9Y3X0 531 aaKnown RBP16.99■□□□□ 0.31
HDAC4-202ENST00000430200 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
HDAC4-202ENST00000430200 NFAT5O94916 1531 aa16.98■□□□□ 0.31
HDAC4-202ENST00000430200 ZC3H6P61129 1189 aaKnown RBP16.98■□□□□ 0.31
HDAC4-202ENST00000430200 COL5A2P05997 1499 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-202ENST00000430200 PEAK1Q9H792 1746 aa16.97■□□□□ 0.31
HDAC4-202ENST00000430200 SBF2Q86WG5 1849 aa16.97■□□□□ 0.31
HDAC4-202ENST00000430200 CPDO75976 1380 aa16.97■□□□□ 0.31
HDAC4-202ENST00000430200 RREB1Q92766 1687 aa16.97■□□□□ 0.31
HDAC4-202ENST00000430200 CABP1Q9NZU7 370 aa16.96■□□□□ 0.31
HDAC4-202ENST00000430200 FAM182BQ5T319 152 aa16.95■□□□□ 0.3
HDAC4-202ENST00000430200 DEFB132Q7Z7B7 95 aa16.95■□□□□ 0.3
HDAC4-202ENST00000430200 CPSF1Q10570 1443 aaKnown RBP16.95■□□□□ 0.3
HDAC4-202ENST00000430200 SPATA31A1Q5TZJ5 1347 aa16.95■□□□□ 0.3
HDAC4-202ENST00000430200 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
HDAC4-202ENST00000430200 NUP188Q5SRE5 1749 aa16.94■□□□□ 0.3
HDAC4-202ENST00000430200 KRT27Q7Z3Y8 459 aa16.93■□□□□ 0.3
HDAC4-202ENST00000430200 ABTB2Q8N961 1025 aa16.93■□□□□ 0.3
HDAC4-202ENST00000430200 STRN4Q9NRL3 753 aa16.92■□□□□ 0.3
HDAC4-202ENST00000430200 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
HDAC4-202ENST00000430200 A0A0G2JS52 829 aa16.91■□□□□ 0.3
HDAC4-202ENST00000430200 MYT1Q01538 1121 aa16.91■□□□□ 0.3
HDAC4-202ENST00000430200 BRD4O60885 1362 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-202ENST00000430200 TONSLQ96HA7 1378 aa16.9■□□□□ 0.3
HDAC4-202ENST00000430200 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
HDAC4-202ENST00000430200 MYOM1P52179 1685 aa16.9■□□□□ 0.3
HDAC4-202ENST00000430200 LRP5O75197 1615 aa16.89■□□□□ 0.29
HDAC4-202ENST00000430200 GCP02774 474 aa16.89■□□□□ 0.29
HDAC4-202ENST00000430200 CCDC125Q86Z20 511 aa16.87■□□□□ 0.29
HDAC4-202ENST00000430200 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
HDAC4-202ENST00000430200 DISP2A7MBM2 1401 aa16.87■□□□□ 0.29
HDAC4-202ENST00000430200 NLRP13Q86W25 1043 aa16.86■□□□□ 0.29
HDAC4-202ENST00000430200 CARD11Q9BXL7 1154 aa16.86■□□□□ 0.29
HDAC4-202ENST00000430200 USP35Q9P2H5 1018 aa16.86■□□□□ 0.29
HDAC4-202ENST00000430200 RGPD2P0DJD1 1756 aa16.86■□□□□ 0.29
HDAC4-202ENST00000430200 ABCC6O95255 1503 aa16.86■□□□□ 0.29
HDAC4-202ENST00000430200 RGPD3A6NKT7 1758 aaPredicted RBP16.85■□□□□ 0.29
HDAC4-202ENST00000430200 RGPD4Q7Z3J3 1758 aa16.85■□□□□ 0.29
HDAC4-202ENST00000430200 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
HDAC4-202ENST00000430200 AATKQ6ZMQ8 1374 aa16.85■□□□□ 0.29
HDAC4-202ENST00000430200 KTN1Q86UP2 1357 aaKnown RBP16.85■□□□□ 0.29
HDAC4-202ENST00000430200 CRB1P82279 1406 aa16.85■□□□□ 0.29
HDAC4-202ENST00000430200 NLRP6P59044 892 aa16.84■□□□□ 0.29
HDAC4-202ENST00000430200 TRIM26Q12899 539 aaPredicted RBP16.84■□□□□ 0.29
HDAC4-202ENST00000430200 KIF20BQ96Q89 1820 aa16.84■□□□□ 0.29
HDAC4-202ENST00000430200 A0A1W2PP64 1363 aa16.83■□□□□ 0.28
HDAC4-202ENST00000430200 AXIN2Q9Y2T1 843 aa16.83■□□□□ 0.28
HDAC4-202ENST00000430200 OVOS2A0A0J9YW53 1432 aa16.82■□□□□ 0.28
HDAC4-202ENST00000430200 OVOS2Q6IE36 1432 aa16.82■□□□□ 0.28
HDAC4-202ENST00000430200 ZBTB7CA1YPR0 619 aa16.82■□□□□ 0.28
HDAC4-202ENST00000430200 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms