RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 TRAK1Q9UPV9 953 aa13.17□□□□□ -0.3
NEDD1-203ENST00000429527 ANP32CO43423 234 aa13.17□□□□□ -0.3
NEDD1-203ENST00000429527 NBPF1Q3BBV0 1214 aa13.17□□□□□ -0.3
NEDD1-203ENST00000429527 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
NEDD1-203ENST00000429527 SENP3Q9H4L4 574 aaPredicted RBP13.17□□□□□ -0.3
NEDD1-203ENST00000429527 NINLQ9Y2I6 1382 aa13.16□□□□□ -0.3
NEDD1-203ENST00000429527 USP19O94966 1318 aa13.16□□□□□ -0.3
NEDD1-203ENST00000429527 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
NEDD1-203ENST00000429527 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
NEDD1-203ENST00000429527 ROCK2O75116 1388 aaKnown RBP13.16□□□□□ -0.3
NEDD1-203ENST00000429527 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
NEDD1-203ENST00000429527 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
NEDD1-203ENST00000429527 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
NEDD1-203ENST00000429527 CD163L1Q9NR16 1453 aa13.15□□□□□ -0.3
NEDD1-203ENST00000429527 CPDO75976 1380 aa13.15□□□□□ -0.3
NEDD1-203ENST00000429527 ATAD2Q6PL18 1390 aa13.14□□□□□ -0.31
NEDD1-203ENST00000429527 POTEAQ6S8J7 498 aa13.14□□□□□ -0.31
NEDD1-203ENST00000429527 MYOM1P52179 1685 aa13.14□□□□□ -0.31
NEDD1-203ENST00000429527 USP6P35125 1406 aa13.14□□□□□ -0.31
NEDD1-203ENST00000429527 WASHC2AQ641Q2 1341 aa13.14□□□□□ -0.31
NEDD1-203ENST00000429527 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
NEDD1-203ENST00000429527 NUDT16Q96DE0 195 aaKnown RBP13.14□□□□□ -0.31
NEDD1-203ENST00000429527 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
NEDD1-203ENST00000429527 CDK19Q9BWU1 502 aa13.13□□□□□ -0.31
NEDD1-203ENST00000429527 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
NEDD1-203ENST00000429527 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
NEDD1-203ENST00000429527 PHF23Q9BUL5 403 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-203ENST00000429527 USP31Q70CQ4 1352 aa13.12□□□□□ -0.31
NEDD1-203ENST00000429527 RGS12O14924 1447 aa13.11□□□□□ -0.31
NEDD1-203ENST00000429527 NFAT5O94916 1531 aa13.11□□□□□ -0.31
NEDD1-203ENST00000429527 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
NEDD1-203ENST00000429527 PARP4Q9UKK3 1724 aaKnown RBP13.11□□□□□ -0.31
NEDD1-203ENST00000429527 AFF2P51816 1311 aa13.11□□□□□ -0.31
NEDD1-203ENST00000429527 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
NEDD1-203ENST00000429527 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
NEDD1-203ENST00000429527 FAM208AQ9UK61 1670 aaKnown RBP13.11□□□□□ -0.31
NEDD1-203ENST00000429527 RNF123Q5XPI4 1314 aa13.1□□□□□ -0.31
NEDD1-203ENST00000429527 INSRP06213 1382 aa13.1□□□□□ -0.31
NEDD1-203ENST00000429527 FOXO3O43524 673 aa13.09□□□□□ -0.31
NEDD1-203ENST00000429527 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
NEDD1-203ENST00000429527 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
NEDD1-203ENST00000429527 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-203ENST00000429527 KIF20BQ96Q89 1820 aa13.07□□□□□ -0.32
NEDD1-203ENST00000429527 RGPD3A6NKT7 1758 aaPredicted RBP13.07□□□□□ -0.32
NEDD1-203ENST00000429527 RGPD4Q7Z3J3 1758 aa13.07□□□□□ -0.32
NEDD1-203ENST00000429527 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
NEDD1-203ENST00000429527 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
NEDD1-203ENST00000429527 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
NEDD1-203ENST00000429527 ACEP12821 1306 aa13.06□□□□□ -0.32
NEDD1-203ENST00000429527 TESK2Q96S53 571 aa13.06□□□□□ -0.32
NEDD1-203ENST00000429527 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-203ENST00000429527 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
NEDD1-203ENST00000429527 CAMTA1Q9Y6Y1 1673 aa13.06□□□□□ -0.32
NEDD1-203ENST00000429527 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
NEDD1-203ENST00000429527 FKBP8Q14318 412 aa13.05□□□□□ -0.32
NEDD1-203ENST00000429527 VPS72Q15906 364 aa13.05□□□□□ -0.32
NEDD1-203ENST00000429527 MEX3CQ5U5Q3 659 aaKnown RBP13.05□□□□□ -0.32
NEDD1-203ENST00000429527 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
NEDD1-203ENST00000429527 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
NEDD1-203ENST00000429527 PEAK1Q9H792 1746 aa13.05□□□□□ -0.32
NEDD1-203ENST00000429527 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
NEDD1-203ENST00000429527 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
NEDD1-203ENST00000429527 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
NEDD1-203ENST00000429527 RXRBP28702 533 aa13.03□□□□□ -0.32
NEDD1-203ENST00000429527 LTN1O94822 1766 aa13.03□□□□□ -0.32
NEDD1-203ENST00000429527 RBM19Q9Y4C8 960 aaKnown RBP13.03□□□□□ -0.32
NEDD1-203ENST00000429527 OVOS2A0A0J9YW53 1432 aa13.03□□□□□ -0.32
NEDD1-203ENST00000429527 OVOS2Q6IE36 1432 aa13.03□□□□□ -0.32
NEDD1-203ENST00000429527 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
NEDD1-203ENST00000429527 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.32
NEDD1-203ENST00000429527 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.33
NEDD1-203ENST00000429527 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
NEDD1-203ENST00000429527 SAFB2Q14151 953 aaKnown RBP eCLIP13.01□□□□□ -0.33
NEDD1-203ENST00000429527 USP21Q9UK80 565 aa13.01□□□□□ -0.33
NEDD1-203ENST00000429527 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
NEDD1-203ENST00000429527 NEFLP07196 543 aa13□□□□□ -0.33
NEDD1-203ENST00000429527 NGLY1Q96IV0 654 aa13□□□□□ -0.33
NEDD1-203ENST00000429527 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
NEDD1-203ENST00000429527 PMFBP1Q8TBY8 1022 aa13□□□□□ -0.33
NEDD1-203ENST00000429527 BCL9O00512 1426 aa13□□□□□ -0.33
NEDD1-203ENST00000429527 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
NEDD1-203ENST00000429527 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
NEDD1-203ENST00000429527 COL5A2P05997 1499 aaPredicted RBP12.99□□□□□ -0.33
NEDD1-203ENST00000429527 USP47Q96K76 1375 aa12.99□□□□□ -0.33
NEDD1-203ENST00000429527 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
NEDD1-203ENST00000429527 C8orf37Q96NL8 207 aa12.99□□□□□ -0.33
NEDD1-203ENST00000429527 DISP2A7MBM2 1401 aa12.98□□□□□ -0.33
NEDD1-203ENST00000429527 ANKRD36BQ8N2N9 1353 aa12.98□□□□□ -0.33
NEDD1-203ENST00000429527 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-203ENST00000429527 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-203ENST00000429527 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-203ENST00000429527 GJD4Q96KN9 370 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-203ENST00000429527 RGPD5Q99666 1765 aa12.98□□□□□ -0.33
NEDD1-203ENST00000429527 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
NEDD1-203ENST00000429527 RREB1Q92766 1687 aa12.97□□□□□ -0.33
NEDD1-203ENST00000429527 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
NEDD1-203ENST00000429527 SPATA31A5Q5VU36 1347 aa12.97□□□□□ -0.33
NEDD1-203ENST00000429527 SPATA31A7Q8IWB4 1347 aa12.97□□□□□ -0.33
NEDD1-203ENST00000429527 FAM83GA6ND36 823 aa12.97□□□□□ -0.33
NEDD1-203ENST00000429527 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms