RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
STRC-201ENST00000428650 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
STRC-201ENST00000428650 SART3Q15020 963 aaKnown RBP17.25■□□□□ 0.35
STRC-201ENST00000428650 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
STRC-201ENST00000428650 PLEKHO1Q53GL0 409 aaPredicted RBP17.25■□□□□ 0.35
STRC-201ENST00000428650 GPRASP1Q5JY77 1395 aa17.25■□□□□ 0.35
STRC-201ENST00000428650 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
STRC-201ENST00000428650 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
STRC-201ENST00000428650 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
STRC-201ENST00000428650 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
STRC-201ENST00000428650 CABP2Q9NPB3 220 aa17.25■□□□□ 0.35
STRC-201ENST00000428650 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
STRC-201ENST00000428650 HMOX1P09601 288 aa17.24■□□□□ 0.35
STRC-201ENST00000428650 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
STRC-201ENST00000428650 HSP90B2PQ58FF3 399 aa17.23■□□□□ 0.35
STRC-201ENST00000428650 WDR33Q9C0J8 1336 aaKnown RBP17.23■□□□□ 0.35
STRC-201ENST00000428650 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
STRC-201ENST00000428650 RUFY1Q96T51 708 aa17.23■□□□□ 0.35
STRC-201ENST00000428650 IL27Q8NEV9 243 aa17.23■□□□□ 0.35
STRC-201ENST00000428650 FSD1Q9BTV5 496 aa17.23■□□□□ 0.35
STRC-201ENST00000428650 JMYQ8N9B5 988 aa17.23■□□□□ 0.35
STRC-201ENST00000428650 FAM13BQ9NYF5 915 aa17.23■□□□□ 0.35
STRC-201ENST00000428650 TCEAL9Q9UHQ7 104 aa17.23■□□□□ 0.35
STRC-201ENST00000428650 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
STRC-201ENST00000428650 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
STRC-201ENST00000428650 KINO60870 393 aaKnown RBP17.22■□□□□ 0.35
STRC-201ENST00000428650 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
STRC-201ENST00000428650 CAVIN1Q6NZI2 390 aaKnown RBP17.22■□□□□ 0.35
STRC-201ENST00000428650 VSIG10Q8N0Z9 540 aa17.22■□□□□ 0.35
STRC-201ENST00000428650 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
STRC-201ENST00000428650 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
STRC-201ENST00000428650 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
STRC-201ENST00000428650 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
STRC-201ENST00000428650 SDF4Q9BRK5 362 aa17.21■□□□□ 0.35
STRC-201ENST00000428650 CWC15Q9P013 229 aaKnown RBP17.21■□□□□ 0.35
STRC-201ENST00000428650 CDCA7LQ96GN5 454 aa17.2■□□□□ 0.34
STRC-201ENST00000428650 ZSCAN31Q96LW9 406 aaPredicted RBP17.2■□□□□ 0.34
STRC-201ENST00000428650 ABCC11Q96J66 1382 aa17.2■□□□□ 0.34
STRC-201ENST00000428650 SMARCE1Q969G3 411 aa17.2■□□□□ 0.34
STRC-201ENST00000428650 CUL7Q14999 1698 aa17.2■□□□□ 0.34
STRC-201ENST00000428650 MYO6Q9UM54 1294 aa17.2■□□□□ 0.34
STRC-201ENST00000428650 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
STRC-201ENST00000428650 NEK4P51957 841 aa17.2■□□□□ 0.34
STRC-201ENST00000428650 FILIP1LQ4L180 1135 aa17.19■□□□□ 0.34
STRC-201ENST00000428650 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
STRC-201ENST00000428650 DACH1Q9UI36 760 aa17.19■□□□□ 0.34
STRC-201ENST00000428650 CTDP1Q9Y5B0 961 aaPredicted RBP17.19■□□□□ 0.34
STRC-201ENST00000428650 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
STRC-201ENST00000428650 LRRCC1Q9C099 1032 aa17.18■□□□□ 0.34
STRC-201ENST00000428650 NOB1Q9ULX3 412 aaKnown RBP17.18■□□□□ 0.34
STRC-201ENST00000428650 FCHSD2O94868 740 aa17.18■□□□□ 0.34
STRC-201ENST00000428650 NAIPQ13075 1403 aa17.18■□□□□ 0.34
STRC-201ENST00000428650 NBPF8Q3BBV2 869 aa17.18■□□□□ 0.34
STRC-201ENST00000428650 TXLNBQ8N3L3 684 aa17.18■□□□□ 0.34
STRC-201ENST00000428650 CCDC192P0DO97 292 aa17.18■□□□□ 0.34
STRC-201ENST00000428650 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
STRC-201ENST00000428650 SLC3A2P08195 630 aaKnown RBP17.17■□□□□ 0.34
STRC-201ENST00000428650 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
STRC-201ENST00000428650 NLRP6P59044 892 aa17.17■□□□□ 0.34
STRC-201ENST00000428650 CCDC66A2RUB6 948 aa17.17■□□□□ 0.34
STRC-201ENST00000428650 ATF3P18847 181 aa17.17■□□□□ 0.34
STRC-201ENST00000428650 NEUROD6Q96NK8 337 aa17.17■□□□□ 0.34
STRC-201ENST00000428650 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
STRC-201ENST00000428650 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
STRC-201ENST00000428650 TRIM5Q9C035 493 aa17.16■□□□□ 0.34
STRC-201ENST00000428650 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
STRC-201ENST00000428650 TXLNAP40222 546 aa17.16■□□□□ 0.34
STRC-201ENST00000428650 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
STRC-201ENST00000428650 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.34
STRC-201ENST00000428650 EPRSP07814 1512 aaKnown RBP17.15■□□□□ 0.34
STRC-201ENST00000428650 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
STRC-201ENST00000428650 R3HCC1Q9Y3T6 440 aaKnown RBP17.15■□□□□ 0.34
STRC-201ENST00000428650 KRT32Q14532 448 aa17.14■□□□□ 0.33
STRC-201ENST00000428650 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
STRC-201ENST00000428650 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
STRC-201ENST00000428650 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
STRC-201ENST00000428650 RDXP35241 583 aaKnown RBP17.14■□□□□ 0.33
STRC-201ENST00000428650 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
STRC-201ENST00000428650 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.33
STRC-201ENST00000428650 PRPF40AO75400 957 aaKnown RBP17.14■□□□□ 0.33
STRC-201ENST00000428650 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
STRC-201ENST00000428650 KRT85P78386 507 aa17.13■□□□□ 0.33
STRC-201ENST00000428650 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
STRC-201ENST00000428650 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
STRC-201ENST00000428650 NBPF1Q3BBV0 1214 aa17.13■□□□□ 0.33
STRC-201ENST00000428650 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
STRC-201ENST00000428650 CCDC158Q5M9N0 1113 aa17.13■□□□□ 0.33
STRC-201ENST00000428650 RBM33Q96EV2 1170 aaKnown RBP17.13■□□□□ 0.33
STRC-201ENST00000428650 KIF6Q6ZMV9 814 aa17.12■□□□□ 0.33
STRC-201ENST00000428650 CCDC43Q96MW1 224 aaKnown RBP17.12■□□□□ 0.33
STRC-201ENST00000428650 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
STRC-201ENST00000428650 RTEL1-TNFRSF6BF6WH68 1400 aa17.12■□□□□ 0.33
STRC-201ENST00000428650 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
STRC-201ENST00000428650 GRPEL1Q9HAV7 217 aa17.11■□□□□ 0.33
STRC-201ENST00000428650 STK38Q15208 465 aa17.11■□□□□ 0.33
STRC-201ENST00000428650 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
STRC-201ENST00000428650 LUC7LQ9NQ29 371 aaKnown RBP17.11■□□□□ 0.33
STRC-201ENST00000428650 CDKL5O76039 1030 aa17.1■□□□□ 0.33
STRC-201ENST00000428650 AFAP1Q8N556 730 aa17.1■□□□□ 0.33
STRC-201ENST00000428650 CDK19Q9BWU1 502 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms