RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 ACBD3Q9H3P7 528 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-208ENST00000428599 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 MYO6Q9UM54 1294 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 ERBINQ96RT1 1412 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 SART3Q15020 963 aaKnown RBP10.78□□□□□ -0.68
CTNND1-208ENST00000428599 SASS6Q6UVJ0 657 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 SLC26A8Q96RN1 970 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 ZBED9Q6R2W3 1325 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 TSPYL4Q9UJ04 414 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 TBC1D2BQ9UPU7 963 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 OLFM4Q6UX06 510 aa10.77□□□□□ -0.69
CTNND1-208ENST00000428599 SMC3Q9UQE7 1217 aa10.77□□□□□ -0.69
CTNND1-208ENST00000428599 CNTLNQ9NXG0 1405 aa10.77□□□□□ -0.69
CTNND1-208ENST00000428599 KIF14Q15058 1648 aa10.77□□□□□ -0.69
CTNND1-208ENST00000428599 CCDC141Q6ZP82 1450 aa10.77□□□□□ -0.69
CTNND1-208ENST00000428599 KIF6Q6ZMV9 814 aa10.76□□□□□ -0.69
CTNND1-208ENST00000428599 MTMR7Q9Y216 660 aa10.76□□□□□ -0.69
CTNND1-208ENST00000428599 COG6Q9Y2V7 657 aa10.76□□□□□ -0.69
CTNND1-208ENST00000428599 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-208ENST00000428599 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
CTNND1-208ENST00000428599 CDK19Q9BWU1 502 aa10.76□□□□□ -0.69
CTNND1-208ENST00000428599 MTHFSP49914 203 aa10.76□□□□□ -0.69
CTNND1-208ENST00000428599 CDK5RAP3Q96JB5 506 aa10.76□□□□□ -0.69
CTNND1-208ENST00000428599 AIMP1Q12904 312 aaKnown RBP10.75□□□□□ -0.69
CTNND1-208ENST00000428599 SYCP1Q15431 976 aa10.75□□□□□ -0.69
CTNND1-208ENST00000428599 ADGRL1O94910 1474 aa10.75□□□□□ -0.69
CTNND1-208ENST00000428599 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
CTNND1-208ENST00000428599 RRP1P56182 461 aaKnown RBP10.75□□□□□ -0.69
CTNND1-208ENST00000428599 GNAI1P63096 354 aa10.75□□□□□ -0.69
CTNND1-208ENST00000428599 INTS3Q68E01 1043 aaKnown RBP10.75□□□□□ -0.69
CTNND1-208ENST00000428599 CAMSAP2Q08AD1 1489 aa10.75□□□□□ -0.69
CTNND1-208ENST00000428599 FOSBP53539 338 aa10.74□□□□□ -0.69
CTNND1-208ENST00000428599 NAT10Q9H0A0 1025 aaKnown RBP10.74□□□□□ -0.69
CTNND1-208ENST00000428599 NINLQ9Y2I6 1382 aa10.74□□□□□ -0.69
CTNND1-208ENST00000428599 DCTN1Q14203 1278 aa10.74□□□□□ -0.69
CTNND1-208ENST00000428599 CRBNQ96SW2 442 aa10.74□□□□□ -0.69
CTNND1-208ENST00000428599 ARGLU1Q9NWB6 273 aaPredicted RBP10.74□□□□□ -0.69
CTNND1-208ENST00000428599 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
CTNND1-208ENST00000428599 GNL3LQ9NVN8 582 aaKnown RBP10.73□□□□□ -0.69
CTNND1-208ENST00000428599 CABP1Q9NZU7 370 aa10.73□□□□□ -0.69
CTNND1-208ENST00000428599 KRT18P05783 430 aaKnown RBP10.73□□□□□ -0.69
CTNND1-208ENST00000428599 SLC12A5Q9H2X9 1139 aa10.73□□□□□ -0.69
CTNND1-208ENST00000428599 RPGRIP1LQ68CZ1 1315 aa10.73□□□□□ -0.69
CTNND1-208ENST00000428599 PSMA5P28066 241 aa10.73□□□□□ -0.69
CTNND1-208ENST00000428599 MNS1Q8NEH6 495 aa10.73□□□□□ -0.69
CTNND1-208ENST00000428599 DZIP1LQ8IYY4 767 aaKnown RBP10.73□□□□□ -0.69
CTNND1-208ENST00000428599 EXOC6Q8TAG9 804 aa10.73□□□□□ -0.69
CTNND1-208ENST00000428599 CAGE1Q8TC20 777 aa10.73□□□□□ -0.69
CTNND1-208ENST00000428599 TXLNAP40222 546 aa10.72□□□□□ -0.69
CTNND1-208ENST00000428599 NBPF8Q3BBV2 869 aa10.72□□□□□ -0.69
CTNND1-208ENST00000428599 ZNF771Q7L3S4 317 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-208ENST00000428599 RTEL1-TNFRSF6BF6WH68 1400 aa10.72□□□□□ -0.69
CTNND1-208ENST00000428599 ZRSR2Q15696 482 aaKnown RBP10.72□□□□□ -0.69
CTNND1-208ENST00000428599 RBM42Q9BTD8 480 aaKnown RBP10.72□□□□□ -0.69
CTNND1-208ENST00000428599 UBTFL1P0CB47 393 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-208ENST00000428599 HSP90B2PQ58FF3 399 aa10.71□□□□□ -0.69
CTNND1-208ENST00000428599 MAGEC2Q9UBF1 373 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-208ENST00000428599 ANKRD30BQ9BXX2 1392 aa10.71□□□□□ -0.69
CTNND1-208ENST00000428599 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
CTNND1-208ENST00000428599 FAM177BA6PVY3 158 aa10.71□□□□□ -0.69
CTNND1-208ENST00000428599 BIVM-ERCC5R4GMW8 1640 aa10.71□□□□□ -0.7
CTNND1-208ENST00000428599 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.7
CTNND1-208ENST00000428599 PTPN23Q9H3S7 1636 aa10.7□□□□□ -0.7
CTNND1-208ENST00000428599 PDILTQ8N807 584 aa10.7□□□□□ -0.7
CTNND1-208ENST00000428599 ADAMTS8Q9UP79 889 aa10.7□□□□□ -0.7
CTNND1-208ENST00000428599 NUTM2BA6NNL0 878 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-208ENST00000428599 NUTM2EB1AL46 878 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-208ENST00000428599 NUTM2AQ8IVF1 878 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-208ENST00000428599 PPP2R1AP30153 589 aa10.7□□□□□ -0.7
CTNND1-208ENST00000428599 HMGB2P26583 209 aaKnown RBP10.7□□□□□ -0.7
CTNND1-208ENST00000428599 GAS2L2Q8NHY3 880 aa10.7□□□□□ -0.7
CTNND1-208ENST00000428599 FSD1Q9BTV5 496 aa10.7□□□□□ -0.7
CTNND1-208ENST00000428599 PRKAR2BP31323 418 aa10.7□□□□□ -0.7
CTNND1-208ENST00000428599 CNTROBQ8N137 903 aa10.7□□□□□ -0.7
CTNND1-208ENST00000428599 ERCC4Q92889 916 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-208ENST00000428599 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-208ENST00000428599 CCDC191Q8NCU4 936 aa10.69□□□□□ -0.7
CTNND1-208ENST00000428599 PDCL3Q9H2J4 239 aa10.69□□□□□ -0.7
CTNND1-208ENST00000428599 BRD4O60885 1362 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-208ENST00000428599 PIP4K2AP48426 406 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-208ENST00000428599 NUCB2P80303 420 aa10.69□□□□□ -0.7
CTNND1-208ENST00000428599 ANKRD18AQ8IVF6 992 aa10.69□□□□□ -0.7
CTNND1-208ENST00000428599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.69□□□□□ -0.7
CTNND1-208ENST00000428599 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
CTNND1-208ENST00000428599 SMARCE1Q969G3 411 aa10.69□□□□□ -0.7
CTNND1-208ENST00000428599 NAIPQ13075 1403 aa10.69□□□□□ -0.7
CTNND1-208ENST00000428599 HSP90AA2PQ14568 343 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-208ENST00000428599 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
CTNND1-208ENST00000428599 FILIP1LQ4L180 1135 aa10.68□□□□□ -0.7
CTNND1-208ENST00000428599 CHMP5Q9NZZ3 219 aa10.68□□□□□ -0.7
CTNND1-208ENST00000428599 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-208ENST00000428599 MPHOSPH10O00566 681 aaKnown RBP10.68□□□□□ -0.7
CTNND1-208ENST00000428599 NOM1Q5C9Z4 860 aaKnown RBP10.68□□□□□ -0.7
CTNND1-208ENST00000428599 TCP11L2Q8N4U5 519 aa10.68□□□□□ -0.7
CTNND1-208ENST00000428599 SDF4Q9BRK5 362 aa10.68□□□□□ -0.7
CTNND1-208ENST00000428599 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
CTNND1-208ENST00000428599 IFT57Q9NWB7 429 aa10.68□□□□□ -0.7
CTNND1-208ENST00000428599 TATP17735 454 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms