RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 NRAPQ86VF7 1730 aa24.24■■□□□ 1.47
VARS-216ENST00000428445 FAM182BQ5T319 152 aa24.24■■□□□ 1.47
VARS-216ENST00000428445 SF3B2Q13435 895 aaKnown RBP24.23■■□□□ 1.47
VARS-216ENST00000428445 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
VARS-216ENST00000428445 NUTM2GQ5VZR2 741 aa24.21■■□□□ 1.47
VARS-216ENST00000428445 ARHGEF28Q8N1W1 1705 aaKnown RBP24.21■■□□□ 1.47
VARS-216ENST00000428445 COL14A1Q05707 1796 aaKnown RBP24.19■■□□□ 1.46
VARS-216ENST00000428445 CDK19Q9BWU1 502 aa24.19■■□□□ 1.46
VARS-216ENST00000428445 EIF3AQ14152 1382 aaKnown RBP24.18■■□□□ 1.46
VARS-216ENST00000428445 CHRNA2Q15822 529 aa24.18■■□□□ 1.46
VARS-216ENST00000428445 CRYBG1Q9Y4K1 1723 aa24.18■■□□□ 1.46
VARS-216ENST00000428445 PRDM11Q9NQV5 511 aa24.16■■□□□ 1.46
VARS-216ENST00000428445 SPATA31A5Q5VU36 1347 aa24.15■■□□□ 1.46
VARS-216ENST00000428445 SPATA31A7Q8IWB4 1347 aa24.15■■□□□ 1.46
VARS-216ENST00000428445 ATP7BP35670 1465 aa24.15■■□□□ 1.46
VARS-216ENST00000428445 NBPF1Q3BBV0 1214 aa24.15■■□□□ 1.46
VARS-216ENST00000428445 STAC3Q96MF2 364 aa24.15■■□□□ 1.46
VARS-216ENST00000428445 PSDA5PKW4 1024 aaPredicted RBP24.14■■□□□ 1.45
VARS-216ENST00000428445 HRCP23327 699 aa24.14■■□□□ 1.45
VARS-216ENST00000428445 ZC3H6P61129 1189 aaKnown RBP24.14■■□□□ 1.45
VARS-216ENST00000428445 STRN4Q9NRL3 753 aa24.13■■□□□ 1.45
VARS-216ENST00000428445 KIAA0232Q92628 1395 aa24.13■■□□□ 1.45
VARS-216ENST00000428445 EN1Q05925 392 aaPredicted RBP24.12■■□□□ 1.45
VARS-216ENST00000428445 ACEP12821 1306 aa24.11■■□□□ 1.45
VARS-216ENST00000428445 ITSN1Q15811 1721 aa24.11■■□□□ 1.45
VARS-216ENST00000428445 BAG6P46379 1132 aa24.1■■□□□ 1.45
VARS-216ENST00000428445 NBPF8Q3BBV2 869 aa24.1■■□□□ 1.45
VARS-216ENST00000428445 USP35Q9P2H5 1018 aa24.08■■□□□ 1.45
VARS-216ENST00000428445 PHRF1Q9P1Y6 1649 aaKnown RBP24.07■■□□□ 1.44
VARS-216ENST00000428445 CCDC61Q9Y6R9 512 aa24.07■■□□□ 1.44
VARS-216ENST00000428445 SPATA31A1Q5TZJ5 1347 aa24.07■■□□□ 1.44
VARS-216ENST00000428445 THSD7AQ9UPZ6 1657 aa24.05■■□□□ 1.44
VARS-216ENST00000428445 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
VARS-216ENST00000428445 PLEKHG3A1L390 1219 aa24.04■■□□□ 1.44
VARS-216ENST00000428445 ABTB2Q8N961 1025 aa24.04■■□□□ 1.44
VARS-216ENST00000428445 TOPAZ1Q8N9V7 1692 aa24.04■■□□□ 1.44
VARS-216ENST00000428445 EVA1CP58658 441 aa24.03■■□□□ 1.44
VARS-216ENST00000428445 CABP2Q9NPB3 220 aa24.03■■□□□ 1.44
VARS-216ENST00000428445 EZH2Q15910 746 aaKnown RBP24.02■■□□□ 1.44
VARS-216ENST00000428445 RGPD1P0DJD0 1748 aa24.01■■□□□ 1.43
VARS-216ENST00000428445 TRIM37O94972 964 aa24.01■■□□□ 1.43
VARS-216ENST00000428445 SRPK2P78362 688 aaKnown RBP24.01■■□□□ 1.43
VARS-216ENST00000428445 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
VARS-216ENST00000428445 LARP1Q6PKG0 1096 aaKnown RBP24■■□□□ 1.43
VARS-216ENST00000428445 R3HDM1Q15032 1099 aaKnown RBP23.99■■□□□ 1.43
VARS-216ENST00000428445 CAMTA1Q9Y6Y1 1673 aa23.99■■□□□ 1.43
VARS-216ENST00000428445 TNS1Q9HBL0 1735 aaKnown RBP23.98■■□□□ 1.43
VARS-216ENST00000428445 PPIP5K1Q6PFW1 1433 aa23.97■■□□□ 1.43
VARS-216ENST00000428445 NRKQ7Z2Y5 1582 aa23.96■■□□□ 1.43
VARS-216ENST00000428445 SSH2Q76I76 1423 aa23.96■■□□□ 1.43
VARS-216ENST00000428445 CENPJQ9HC77 1338 aaPredicted RBP23.96■■□□□ 1.43
VARS-216ENST00000428445 ZBTB7CA1YPR0 619 aa23.96■■□□□ 1.43
VARS-216ENST00000428445 FAM196AQ6ZSG2 479 aa23.95■■□□□ 1.42
VARS-216ENST00000428445 APBA3O96018 575 aa23.94■■□□□ 1.42
VARS-216ENST00000428445 GCP02774 474 aa23.94■■□□□ 1.42
VARS-216ENST00000428445 CAMKK2Q96RR4 588 aa23.94■■□□□ 1.42
VARS-216ENST00000428445 CABP1Q9NZU7 370 aa23.94■■□□□ 1.42
VARS-216ENST00000428445 LRP5O75197 1615 aa23.94■■□□□ 1.42
VARS-216ENST00000428445 USP19O94966 1318 aa23.93■■□□□ 1.42
VARS-216ENST00000428445 PDE3BQ13370 1112 aa23.92■■□□□ 1.42
VARS-216ENST00000428445 BARGINQ6ZT62 677 aa23.92■■□□□ 1.42
VARS-216ENST00000428445 NLRP13Q86W25 1043 aa23.92■■□□□ 1.42
VARS-216ENST00000428445 L3MBTL2Q969R5 705 aa23.92■■□□□ 1.42
VARS-216ENST00000428445 SIN3AQ96ST3 1273 aa23.92■■□□□ 1.42
VARS-216ENST00000428445 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
VARS-216ENST00000428445 LMO7Q8WWI1 1683 aa23.91■■□□□ 1.42
VARS-216ENST00000428445 QRICH2Q9H0J4 1663 aa23.91■■□□□ 1.42
VARS-216ENST00000428445 DISP2A7MBM2 1401 aa23.9■■□□□ 1.42
VARS-216ENST00000428445 CPDO75976 1380 aa23.9■■□□□ 1.42
VARS-216ENST00000428445 NLRP6P59044 892 aa23.88■■□□□ 1.41
VARS-216ENST00000428445 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
VARS-216ENST00000428445 COL5A2P05997 1499 aaPredicted RBP23.85■■□□□ 1.41
VARS-216ENST00000428445 USP6P35125 1406 aa23.84■■□□□ 1.41
VARS-216ENST00000428445 AXIN2Q9Y2T1 843 aa23.82■■□□□ 1.4
VARS-216ENST00000428445 THRAP3Q9Y2W1 955 aaKnown RBP23.81■■□□□ 1.4
VARS-216ENST00000428445 SOX12O15370 315 aa23.8■■□□□ 1.4
VARS-216ENST00000428445 PIK3C2AO00443 1686 aa23.79■■□□□ 1.4
VARS-216ENST00000428445 EVC2Q86UK5 1308 aa23.79■■□□□ 1.4
VARS-216ENST00000428445 CRB1P82279 1406 aa23.78■■□□□ 1.4
VARS-216ENST00000428445 TRPM1Q7Z4N2 1603 aa23.78■■□□□ 1.4
VARS-216ENST00000428445 TOM1L2Q6ZVM7 507 aa23.78■■□□□ 1.4
VARS-216ENST00000428445 PTF1AQ7RTS3 328 aa23.78■■□□□ 1.4
VARS-216ENST00000428445 NUP188Q5SRE5 1749 aa23.78■■□□□ 1.4
VARS-216ENST00000428445 PARP4Q9UKK3 1724 aaKnown RBP23.78■■□□□ 1.4
VARS-216ENST00000428445 SLIT3O75094 1523 aa23.78■■□□□ 1.4
VARS-216ENST00000428445 COL18A1P39060 1754 aa23.78■■□□□ 1.4
VARS-216ENST00000428445 RREB1Q92766 1687 aa23.77■■□□□ 1.4
VARS-216ENST00000428445 AATKQ6ZMQ8 1374 aa23.77■■□□□ 1.4
VARS-216ENST00000428445 RGPD5Q99666 1765 aa23.76■■□□□ 1.39
VARS-216ENST00000428445 TTC21BQ7Z4L5 1316 aa23.76■■□□□ 1.39
VARS-216ENST00000428445 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
VARS-216ENST00000428445 ROCK2O75116 1388 aaKnown RBP23.75■■□□□ 1.39
VARS-216ENST00000428445 PARD3Q8TEW0 1356 aa23.74■■□□□ 1.39
VARS-216ENST00000428445 DDB1Q16531 1140 aa23.73■■□□□ 1.39
VARS-216ENST00000428445 NBPF14Q5TI25 921 aa23.72■■□□□ 1.39
VARS-216ENST00000428445 ARHGEF25Q86VW2 580 aa23.72■■□□□ 1.39
VARS-216ENST00000428445 PEAK1Q9H792 1746 aa23.72■■□□□ 1.39
VARS-216ENST00000428445 SBF2Q86WG5 1849 aa23.71■■□□□ 1.39
VARS-216ENST00000428445 LRRC37A3O60309 1634 aa23.71■■□□□ 1.39
VARS-216ENST00000428445 AKAP12Q02952 1782 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms