RNA–Protein interactions for RNA: ENST00000428308.6

PAPD4-203, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-203ENST00000428308 POM121Q96HA1 1249 aa8.97□□□□□ -0.97
PAPD4-203ENST00000428308 FAM135BQ49AJ0 1406 aa8.97□□□□□ -0.97
PAPD4-203ENST00000428308 TRPM2O94759 1503 aa8.97□□□□□ -0.97
PAPD4-203ENST00000428308 SLC52A1Q9NWF4 448 aa8.97□□□□□ -0.97
PAPD4-203ENST00000428308 RIMS2Q9UQ26 1411 aa8.97□□□□□ -0.97
PAPD4-203ENST00000428308 KIF1BO60333 1816 aa8.96□□□□□ -0.97
PAPD4-203ENST00000428308 ZFYVE9O95405 1425 aa8.96□□□□□ -0.97
PAPD4-203ENST00000428308 NEUROD1Q13562 356 aa8.96□□□□□ -0.97
PAPD4-203ENST00000428308 PLSCR2Q9NRY7 297 aa8.96□□□□□ -0.98
PAPD4-203ENST00000428308 CCDC144AA2RUR9 1427 aa8.95□□□□□ -0.98
PAPD4-203ENST00000428308 ADGRF5Q8IZF2 1346 aa8.95□□□□□ -0.98
PAPD4-203ENST00000428308 UNCXA6NJT0 531 aa8.95□□□□□ -0.98
PAPD4-203ENST00000428308 IGSF5Q9NSI5 407 aa8.94□□□□□ -0.98
PAPD4-203ENST00000428308 NUBP1P53384 320 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 CCDC27Q2M243 656 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 GOPCQ9HD26 462 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 NEXMIFQ5QGS0 1516 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 NRXN3Q9Y4C0 1643 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 TAF7LQ5H9L4 462 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 DCAF8Q5TAQ9 597 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 TMEM132EQ6IEE7 984 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 ANKRD30BQ9BXX2 1392 aa8.93□□□□□ -0.98
PAPD4-203ENST00000428308 XIRP1Q702N8 1843 aaKnown RBP8.92□□□□□ -0.98
PAPD4-203ENST00000428308 PATL2C9JE40 543 aaKnown RBP8.92□□□□□ -0.98
PAPD4-203ENST00000428308 PDE4CQ08493 712 aa8.92□□□□□ -0.98
PAPD4-203ENST00000428308 DDX17Q92841 729 aaKnown RBP8.92□□□□□ -0.98
PAPD4-203ENST00000428308 METP08581 1390 aa8.92□□□□□ -0.98
PAPD4-203ENST00000428308 MSH6P52701 1360 aa8.92□□□□□ -0.98
PAPD4-203ENST00000428308 DHX57Q6P158 1386 aaKnown RBP8.92□□□□□ -0.98
PAPD4-203ENST00000428308 PPLO60437 1756 aa8.91□□□□□ -0.98
PAPD4-203ENST00000428308 ADAMTS13Q76LX8 1427 aa8.91□□□□□ -0.98
PAPD4-203ENST00000428308 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
PAPD4-203ENST00000428308 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
PAPD4-203ENST00000428308 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
PAPD4-203ENST00000428308 TBX22Q9Y458 520 aa8.91□□□□□ -0.98
PAPD4-203ENST00000428308 SPATA31E1Q6ZUB1 1445 aa8.91□□□□□ -0.98
PAPD4-203ENST00000428308 PTPRUQ92729 1446 aa8.91□□□□□ -0.98
PAPD4-203ENST00000428308 DCAF11Q8TEB1 546 aa8.9□□□□□ -0.98
PAPD4-203ENST00000428308 STK26Q9P289 416 aa8.9□□□□□ -0.98
PAPD4-203ENST00000428308 KCNA1Q09470 495 aa8.9□□□□□ -0.98
PAPD4-203ENST00000428308 PLEKHG1Q9ULL1 1385 aa8.89□□□□□ -0.99
PAPD4-203ENST00000428308 KDM5AP29375 1690 aaKnown RBP8.89□□□□□ -0.99
PAPD4-203ENST00000428308 SAFB2Q14151 953 aaKnown RBP eCLIP8.89□□□□□ -0.99
PAPD4-203ENST00000428308 C19orf44Q9H6X5 657 aa8.89□□□□□ -0.99
PAPD4-203ENST00000428308 ROBO1Q9Y6N7 1651 aa8.89□□□□□ -0.99
PAPD4-203ENST00000428308 NUTM2FA1L443 756 aa8.88□□□□□ -0.99
PAPD4-203ENST00000428308 ATF3P18847 181 aa8.88□□□□□ -0.99
PAPD4-203ENST00000428308 HDGFP51858 240 aaKnown RBP8.88□□□□□ -0.99
PAPD4-203ENST00000428308 CFAP70Q5T0N1 1121 aa8.88□□□□□ -0.99
PAPD4-203ENST00000428308 MEX3CQ5U5Q3 659 aaKnown RBP8.88□□□□□ -0.99
PAPD4-203ENST00000428308 BRINP3Q76B58 766 aa8.88□□□□□ -0.99
PAPD4-203ENST00000428308 CERS3Q8IU89 383 aa8.88□□□□□ -0.99
PAPD4-203ENST00000428308 PARP9Q8IXQ6 854 aa8.88□□□□□ -0.99
PAPD4-203ENST00000428308 JCADQ9P266 1359 aa8.88□□□□□ -0.99
PAPD4-203ENST00000428308 IFT172Q9UG01 1749 aa8.88□□□□□ -0.99
PAPD4-203ENST00000428308 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
PAPD4-203ENST00000428308 EP400Q96L91 3159 aa8.87□□□□□ -0.99
PAPD4-203ENST00000428308 CHD2O14647 1828 aaKnown RBP8.87□□□□□ -0.99
PAPD4-203ENST00000428308 LRP6O75581 1613 aa8.87□□□□□ -0.99
PAPD4-203ENST00000428308 BRD1O95696 1058 aa8.87□□□□□ -0.99
PAPD4-203ENST00000428308 WAPLQ7Z5K2 1190 aa8.86□□□□□ -0.99
PAPD4-203ENST00000428308 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.86□□□□□ -0.99
PAPD4-203ENST00000428308 SETD1AO15047 1707 aaKnown RBP8.86□□□□□ -0.99
PAPD4-203ENST00000428308 UPF1Q92900 1129 aaKnown RBP eCLIP8.85□□□□□ -0.99
PAPD4-203ENST00000428308 NKTRP30414 1462 aaKnown RBP8.85□□□□□ -0.99
PAPD4-203ENST00000428308 ASXL1Q8IXJ9 1541 aa8.85□□□□□ -0.99
PAPD4-203ENST00000428308 SMARCA5O60264 1052 aaPredicted RBP8.85□□□□□ -0.99
PAPD4-203ENST00000428308 NBPF1Q3BBV0 1214 aa8.85□□□□□ -0.99
PAPD4-203ENST00000428308 ZNF592Q92610 1267 aa8.85□□□□□ -0.99
PAPD4-203ENST00000428308 L3MBTL2Q969R5 705 aa8.85□□□□□ -0.99
PAPD4-203ENST00000428308 PLEKHH1Q9ULM0 1364 aa8.85□□□□□ -0.99
PAPD4-203ENST00000428308 PCMTD1Q96MG8 357 aaPredicted RBP8.84□□□□□ -0.99
PAPD4-203ENST00000428308 HIRIP3Q9BW71 556 aaPredicted RBP8.84□□□□□ -0.99
PAPD4-203ENST00000428308 ROBO2Q9HCK4 1378 aa8.84□□□□□ -0.99
PAPD4-203ENST00000428308 CHRM1P11229 460 aaPredicted RBP8.84□□□□□ -0.99
PAPD4-203ENST00000428308 SSUH2Q9Y2M2 353 aa8.84□□□□□ -0.99
PAPD4-203ENST00000428308 NWD1Q149M9 1564 aa8.83□□□□□ -1
PAPD4-203ENST00000428308 SETBP1Q9Y6X0 1596 aa8.83□□□□□ -1
PAPD4-203ENST00000428308 ADAMTS2O95450 1211 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 CANXP27824 592 aaKnown RBP8.82□□□□□ -1
PAPD4-203ENST00000428308 RXRBP28702 533 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 SND1Q7KZF4 910 aaKnown RBP eCLIP8.82□□□□□ -1
PAPD4-203ENST00000428308 C8orf37Q96NL8 207 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 ORAI2Q96SN7 254 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 TRAK1Q9UPV9 953 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 PIK3C2GO75747 1445 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 SPATA31A6Q5VVP1 1343 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 ACIN1Q9UKV3 1341 aaKnown RBP8.82□□□□□ -1
PAPD4-203ENST00000428308 ZNF772Q68DY9 489 aaPredicted RBP8.82□□□□□ -1
PAPD4-203ENST00000428308 BRPF3Q9ULD4 1205 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 AFF2P51816 1311 aa8.82□□□□□ -1
PAPD4-203ENST00000428308 PHLPP1O60346 1717 aa8.81□□□□□ -1
PAPD4-203ENST00000428308 AMHR2Q16671 573 aa8.81□□□□□ -1
PAPD4-203ENST00000428308 NBPF8Q3BBV2 869 aa8.81□□□□□ -1
PAPD4-203ENST00000428308 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
PAPD4-203ENST00000428308 BCCIPQ9P287 314 aaKnown RBP eCLIP8.81□□□□□ -1
PAPD4-203ENST00000428308 IVNS1ABPQ9Y6Y0 642 aa8.81□□□□□ -1
PAPD4-203ENST00000428308 NALCNQ8IZF0 1738 aa8.81□□□□□ -1
PAPD4-203ENST00000428308 COL16A1Q07092 1604 aaPredicted RBP8.8□□□□□ -1
PAPD4-203ENST00000428308 SPATA32Q96LK8 384 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms