RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 CRYBG1Q9Y4K1 1723 aa39.25■■■■□ 3.87
LMO1-202ENST00000428101 EP400Q96L91 3159 aa39.25■■■■□ 3.87
LMO1-202ENST00000428101 VPS72Q15906 364 aa39.24■■■■□ 3.87
LMO1-202ENST00000428101 POLR3AO14802 1390 aaPredicted RBP39.23■■■■□ 3.87
LMO1-202ENST00000428101 PLEKHG3A1L390 1219 aa39.21■■■■□ 3.87
LMO1-202ENST00000428101 TRPM1Q7Z4N2 1603 aa39.21■■■■□ 3.87
LMO1-202ENST00000428101 ACEP12821 1306 aa39.2■■■■□ 3.87
LMO1-202ENST00000428101 NBPF8Q3BBV2 869 aa39.19■■■■□ 3.86
LMO1-202ENST00000428101 QRICH2Q9H0J4 1663 aa39.19■■■■□ 3.86
LMO1-202ENST00000428101 NRAPQ86VF7 1730 aa39.17■■■■□ 3.86
LMO1-202ENST00000428101 COL14A1Q05707 1796 aaKnown RBP39.16■■■■□ 3.86
LMO1-202ENST00000428101 SRPK2P78362 688 aaKnown RBP39.15■■■■□ 3.86
LMO1-202ENST00000428101 BRWD3Q6RI45 1802 aa39.14■■■■□ 3.86
LMO1-202ENST00000428101 CABP2Q9NPB3 220 aa39.14■■■■□ 3.86
LMO1-202ENST00000428101 BTG4Q9NY30 223 aa39.14■■■■□ 3.86
LMO1-202ENST00000428101 CCDC9Q9Y3X0 531 aaKnown RBP39.13■■■■□ 3.85
LMO1-202ENST00000428101 ONECUT3O60422 494 aaPredicted RBP39.12■■■■□ 3.85
LMO1-202ENST00000428101 PPIP5K1Q6PFW1 1433 aa39.1■■■■□ 3.85
LMO1-202ENST00000428101 SEPT12Q8IYM1 358 aa39.1■■■■□ 3.85
LMO1-202ENST00000428101 NUTM2GQ5VZR2 741 aa39.08■■■■□ 3.85
LMO1-202ENST00000428101 ROCK2O75116 1388 aaKnown RBP39.08■■■■□ 3.85
LMO1-202ENST00000428101 PHRF1Q9P1Y6 1649 aaKnown RBP39.07■■■■□ 3.85
LMO1-202ENST00000428101 PRDM11Q9NQV5 511 aa39.05■■■■□ 3.84
LMO1-202ENST00000428101 CCDC125Q86Z20 511 aa39.03■■■■□ 3.84
LMO1-202ENST00000428101 KIAA0232Q92628 1395 aa39.03■■■■□ 3.84
LMO1-202ENST00000428101 ABTB2Q8N961 1025 aa39.01■■■■□ 3.84
LMO1-202ENST00000428101 CABP1Q9NZU7 370 aa39■■■■□ 3.83
LMO1-202ENST00000428101 EVC2Q86UK5 1308 aa38.98■■■■□ 3.83
LMO1-202ENST00000428101 ZC3H6P61129 1189 aaKnown RBP38.98■■■■□ 3.83
LMO1-202ENST00000428101 CHRNA2Q15822 529 aa38.98■■■■□ 3.83
LMO1-202ENST00000428101 SPATA31A5Q5VU36 1347 aa38.97■■■■□ 3.83
LMO1-202ENST00000428101 SPATA31A7Q8IWB4 1347 aa38.97■■■■□ 3.83
LMO1-202ENST00000428101 FAM98CQ17RN3 349 aaKnown RBP38.97■■■■□ 3.83
LMO1-202ENST00000428101 KRT27Q7Z3Y8 459 aa38.95■■■■□ 3.83
LMO1-202ENST00000428101 USP19O94966 1318 aa38.94■■■■□ 3.82
LMO1-202ENST00000428101 NRKQ7Z2Y5 1582 aa38.94■■■■□ 3.82
LMO1-202ENST00000428101 BRD4O60885 1362 aaPredicted RBP38.93■■■■□ 3.82
LMO1-202ENST00000428101 USP6P35125 1406 aa38.91■■■■□ 3.82
LMO1-202ENST00000428101 BLMP54132 1417 aaPredicted RBP38.91■■■■□ 3.82
LMO1-202ENST00000428101 TRIM26Q12899 539 aaPredicted RBP38.91■■■■□ 3.82
LMO1-202ENST00000428101 A0A0G2JS52 829 aa38.89■■■■□ 3.82
LMO1-202ENST00000428101 MYT1Q01538 1121 aa38.89■■■■□ 3.82
LMO1-202ENST00000428101 NLRP13Q86W25 1043 aa38.89■■■■□ 3.82
LMO1-202ENST00000428101 CPDO75976 1380 aa38.86■■■■□ 3.81
LMO1-202ENST00000428101 SSH2Q76I76 1423 aa38.86■■■■□ 3.81
LMO1-202ENST00000428101 TONSLQ96HA7 1378 aa38.85■■■■□ 3.81
LMO1-202ENST00000428101 GCP02774 474 aa38.85■■■■□ 3.81
LMO1-202ENST00000428101 STRN4Q9NRL3 753 aa38.85■■■■□ 3.81
LMO1-202ENST00000428101 SPATA31A1Q5TZJ5 1347 aa38.85■■■■□ 3.81
LMO1-202ENST00000428101 THSD7AQ9UPZ6 1657 aa38.84■■■■□ 3.81
LMO1-202ENST00000428101 CARD11Q9BXL7 1154 aa38.83■■■■□ 3.81
LMO1-202ENST00000428101 LMO7Q8WWI1 1683 aa38.82■■■■□ 3.81
LMO1-202ENST00000428101 CAMTA1Q9Y6Y1 1673 aa38.82■■■■□ 3.81
LMO1-202ENST00000428101 NLRP6P59044 892 aa38.79■■■■□ 3.8
LMO1-202ENST00000428101 AKAP12Q02952 1782 aa38.79■■■■□ 3.8
LMO1-202ENST00000428101 SBNO2Q9Y2G9 1366 aa38.79■■■■□ 3.8
LMO1-202ENST00000428101 PIK3C2AO00443 1686 aa38.78■■■■□ 3.8
LMO1-202ENST00000428101 DEFB132Q7Z7B7 95 aa38.78■■■■□ 3.8
LMO1-202ENST00000428101 EVA1CP58658 441 aa38.77■■■■□ 3.8
LMO1-202ENST00000428101 ZNF692Q9BU19 519 aaPredicted RBP38.77■■■■□ 3.8
LMO1-202ENST00000428101 SLIT3O75094 1523 aa38.75■■■■□ 3.79
LMO1-202ENST00000428101 SF3B2Q13435 895 aaKnown RBP38.75■■■■□ 3.79
LMO1-202ENST00000428101 ZRANB1Q9UGI0 708 aa38.74■■■■□ 3.79
LMO1-202ENST00000428101 FAM182BQ5T319 152 aa38.73■■■■□ 3.79
LMO1-202ENST00000428101 LARP1Q6PKG0 1096 aaKnown RBP38.73■■■■□ 3.79
LMO1-202ENST00000428101 CPSF1Q10570 1443 aaKnown RBP38.72■■■■□ 3.79
LMO1-202ENST00000428101 TTC21BQ7Z4L5 1316 aa38.72■■■■□ 3.79
LMO1-202ENST00000428101 USP35Q9P2H5 1018 aa38.72■■■■□ 3.79
LMO1-202ENST00000428101 SRCAPQ6ZRS2 3230 aa38.69■■■■□ 3.78
LMO1-202ENST00000428101 BARGINQ6ZT62 677 aa38.69■■■■□ 3.78
LMO1-202ENST00000428101 COL5A2P05997 1499 aaPredicted RBP38.67■■■■□ 3.78
LMO1-202ENST00000428101 AATKQ6ZMQ8 1374 aa38.65■■■■□ 3.78
LMO1-202ENST00000428101 TTC21AQ8NDW8 1320 aa38.64■■■■□ 3.78
LMO1-202ENST00000428101 TCP11L2Q8N4U5 519 aa38.64■■■■□ 3.78
LMO1-202ENST00000428101 KTN1Q86UP2 1357 aaKnown RBP38.64■■■■□ 3.78
LMO1-202ENST00000428101 COL18A1P39060 1754 aa38.63■■■■□ 3.77
LMO1-202ENST00000428101 ZBTB7CA1YPR0 619 aa38.63■■■■□ 3.77
LMO1-202ENST00000428101 MON2Q7Z3U7 1717 aa38.63■■■■□ 3.77
LMO1-202ENST00000428101 RGPD1P0DJD0 1748 aa38.6■■■■□ 3.77
LMO1-202ENST00000428101 CD163L1Q9NR16 1453 aa38.6■■■■□ 3.77
LMO1-202ENST00000428101 BAG6P46379 1132 aa38.59■■■■□ 3.77
LMO1-202ENST00000428101 THRAP3Q9Y2W1 955 aaKnown RBP38.59■■■■□ 3.77
LMO1-202ENST00000428101 ARHGEF25Q86VW2 580 aa38.56■■■■□ 3.76
LMO1-202ENST00000428101 KCNH5Q8NCM2 988 aa38.56■■■■□ 3.76
LMO1-202ENST00000428101 AXIN2Q9Y2T1 843 aa38.56■■■■□ 3.76
LMO1-202ENST00000428101 CRB1P82279 1406 aa38.55■■■■□ 3.76
LMO1-202ENST00000428101 FAM196AQ6ZSG2 479 aa38.55■■■■□ 3.76
LMO1-202ENST00000428101 TMC1Q8TDI8 760 aa38.54■■■■□ 3.76
LMO1-202ENST00000428101 SLC12A5Q9H2X9 1139 aa38.54■■■■□ 3.76
LMO1-202ENST00000428101 TNS1Q9HBL0 1735 aaKnown RBP38.54■■■■□ 3.76
LMO1-202ENST00000428101 TESK2Q96S53 571 aa38.53■■■■□ 3.76
LMO1-202ENST00000428101 SOX12O15370 315 aa38.52■■■■□ 3.76
LMO1-202ENST00000428101 PDE3BQ13370 1112 aa38.52■■■■□ 3.76
LMO1-202ENST00000428101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.52■■■■□ 3.76
LMO1-202ENST00000428101 PUS7Q96PZ0 661 aaKnown RBP38.52■■■■□ 3.76
LMO1-202ENST00000428101 NFAT5O94916 1531 aa38.52■■■■□ 3.76
LMO1-202ENST00000428101 ST20-MTHFSA0A0A6YYL1 179 aa38.51■■■■□ 3.76
LMO1-202ENST00000428101 EN1Q05925 392 aaPredicted RBP38.51■■■■□ 3.76
LMO1-202ENST00000428101 RGPD5Q99666 1765 aa38.51■■■■□ 3.76
LMO1-202ENST00000428101 PARP4Q9UKK3 1724 aaKnown RBP38.5■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms