RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 ACEP12821 1306 aa27.41■■□□□ 1.98
AL954642.1-201ENST00000428088 QRICH2Q9H0J4 1663 aa27.4■■□□□ 1.98
AL954642.1-201ENST00000428088 ATAD2Q6PL18 1390 aa27.4■■□□□ 1.98
AL954642.1-201ENST00000428088 SRPK2P78362 688 aaKnown RBP27.4■■□□□ 1.98
AL954642.1-201ENST00000428088 EP400Q96L91 3159 aa27.4■■□□□ 1.98
AL954642.1-201ENST00000428088 PLEKHG3A1L390 1219 aa27.38■■□□□ 1.97
AL954642.1-201ENST00000428088 VPS72Q15906 364 aa27.38■■□□□ 1.97
AL954642.1-201ENST00000428088 NBPF8Q3BBV2 869 aa27.38■■□□□ 1.97
AL954642.1-201ENST00000428088 CABP2Q9NPB3 220 aa27.38■■□□□ 1.97
AL954642.1-201ENST00000428088 CRYBG1Q9Y4K1 1723 aa27.38■■□□□ 1.97
AL954642.1-201ENST00000428088 POLR3AO14802 1390 aaPredicted RBP27.37■■□□□ 1.97
AL954642.1-201ENST00000428088 CCDC9Q9Y3X0 531 aaKnown RBP27.37■■□□□ 1.97
AL954642.1-201ENST00000428088 ROCK2O75116 1388 aaKnown RBP27.35■■□□□ 1.97
AL954642.1-201ENST00000428088 BTG4Q9NY30 223 aa27.35■■□□□ 1.97
AL954642.1-201ENST00000428088 NUTM2GQ5VZR2 741 aa27.34■■□□□ 1.97
AL954642.1-201ENST00000428088 COL14A1Q05707 1796 aaKnown RBP27.33■■□□□ 1.97
AL954642.1-201ENST00000428088 PPIP5K1Q6PFW1 1433 aa27.33■■□□□ 1.96
AL954642.1-201ENST00000428088 TRIM26Q12899 539 aaPredicted RBP27.32■■□□□ 1.96
AL954642.1-201ENST00000428088 NRAPQ86VF7 1730 aa27.32■■□□□ 1.96
AL954642.1-201ENST00000428088 BRWD3Q6RI45 1802 aa27.32■■□□□ 1.96
AL954642.1-201ENST00000428088 SEPT12Q8IYM1 358 aa27.3■■□□□ 1.96
AL954642.1-201ENST00000428088 PRDM11Q9NQV5 511 aa27.29■■□□□ 1.96
AL954642.1-201ENST00000428088 PHRF1Q9P1Y6 1649 aaKnown RBP27.28■■□□□ 1.96
AL954642.1-201ENST00000428088 ABTB2Q8N961 1025 aa27.28■■□□□ 1.96
AL954642.1-201ENST00000428088 CABP1Q9NZU7 370 aa27.27■■□□□ 1.96
AL954642.1-201ENST00000428088 KIAA0232Q92628 1395 aa27.26■■□□□ 1.95
AL954642.1-201ENST00000428088 EVC2Q86UK5 1308 aa27.26■■□□□ 1.95
AL954642.1-201ENST00000428088 ONECUT3O60422 494 aaPredicted RBP27.26■■□□□ 1.95
AL954642.1-201ENST00000428088 ZC3H6P61129 1189 aaKnown RBP27.25■■□□□ 1.95
AL954642.1-201ENST00000428088 CHRNA2Q15822 529 aa27.25■■□□□ 1.95
AL954642.1-201ENST00000428088 TONSLQ96HA7 1378 aa27.22■■□□□ 1.95
AL954642.1-201ENST00000428088 FAM98CQ17RN3 349 aaKnown RBP27.22■■□□□ 1.95
AL954642.1-201ENST00000428088 A0A0G2JS52 829 aa27.21■■□□□ 1.95
AL954642.1-201ENST00000428088 MYT1Q01538 1121 aa27.21■■□□□ 1.95
AL954642.1-201ENST00000428088 CCDC125Q86Z20 511 aa27.2■■□□□ 1.94
AL954642.1-201ENST00000428088 KRT27Q7Z3Y8 459 aa27.19■■□□□ 1.94
AL954642.1-201ENST00000428088 CARD11Q9BXL7 1154 aa27.19■■□□□ 1.94
AL954642.1-201ENST00000428088 SPATA31A5Q5VU36 1347 aa27.18■■□□□ 1.94
AL954642.1-201ENST00000428088 SPATA31A7Q8IWB4 1347 aa27.18■■□□□ 1.94
AL954642.1-201ENST00000428088 NLRP13Q86W25 1043 aa27.18■■□□□ 1.94
AL954642.1-201ENST00000428088 NRKQ7Z2Y5 1582 aa27.18■■□□□ 1.94
AL954642.1-201ENST00000428088 USP6P35125 1406 aa27.17■■□□□ 1.94
AL954642.1-201ENST00000428088 STRN4Q9NRL3 753 aa27.17■■□□□ 1.94
AL954642.1-201ENST00000428088 USP19O94966 1318 aa27.16■■□□□ 1.94
AL954642.1-201ENST00000428088 BRD4O60885 1362 aaPredicted RBP27.16■■□□□ 1.94
AL954642.1-201ENST00000428088 GCP02774 474 aa27.13■■□□□ 1.93
AL954642.1-201ENST00000428088 NLRP6P59044 892 aa27.13■■□□□ 1.93
AL954642.1-201ENST00000428088 BLMP54132 1417 aaPredicted RBP27.12■■□□□ 1.93
AL954642.1-201ENST00000428088 SPATA31A1Q5TZJ5 1347 aa27.12■■□□□ 1.93
AL954642.1-201ENST00000428088 CPDO75976 1380 aa27.11■■□□□ 1.93
AL954642.1-201ENST00000428088 SSH2Q76I76 1423 aa27.11■■□□□ 1.93
AL954642.1-201ENST00000428088 EVA1CP58658 441 aa27.11■■□□□ 1.93
AL954642.1-201ENST00000428088 AKAP12Q02952 1782 aa27.1■■□□□ 1.93
AL954642.1-201ENST00000428088 CAMTA1Q9Y6Y1 1673 aa27.1■■□□□ 1.93
AL954642.1-201ENST00000428088 ZNF692Q9BU19 519 aaPredicted RBP27.09■■□□□ 1.93
AL954642.1-201ENST00000428088 SBNO2Q9Y2G9 1366 aa27.09■■□□□ 1.93
AL954642.1-201ENST00000428088 PIK3C2AO00443 1686 aa27.08■■□□□ 1.93
AL954642.1-201ENST00000428088 USP35Q9P2H5 1018 aa27.08■■□□□ 1.93
AL954642.1-201ENST00000428088 LMO7Q8WWI1 1683 aa27.08■■□□□ 1.92
AL954642.1-201ENST00000428088 ZBTB7CA1YPR0 619 aa27.07■■□□□ 1.92
AL954642.1-201ENST00000428088 TTC21BQ7Z4L5 1316 aa27.07■■□□□ 1.92
AL954642.1-201ENST00000428088 THSD7AQ9UPZ6 1657 aa27.07■■□□□ 1.92
AL954642.1-201ENST00000428088 SF3B2Q13435 895 aaKnown RBP27.06■■□□□ 1.92
AL954642.1-201ENST00000428088 FAM182BQ5T319 152 aa27.06■■□□□ 1.92
AL954642.1-201ENST00000428088 DEFB132Q7Z7B7 95 aa27.06■■□□□ 1.92
AL954642.1-201ENST00000428088 LARP1Q6PKG0 1096 aaKnown RBP27.05■■□□□ 1.92
AL954642.1-201ENST00000428088 CPSF1Q10570 1443 aaKnown RBP27.04■■□□□ 1.92
AL954642.1-201ENST00000428088 SLIT3O75094 1523 aa27.04■■□□□ 1.92
AL954642.1-201ENST00000428088 KTN1Q86UP2 1357 aaKnown RBP27.02■■□□□ 1.92
AL954642.1-201ENST00000428088 ZRANB1Q9UGI0 708 aa27.02■■□□□ 1.92
AL954642.1-201ENST00000428088 TTC21AQ8NDW8 1320 aa27■■□□□ 1.91
AL954642.1-201ENST00000428088 TMC1Q8TDI8 760 aa27■■□□□ 1.91
AL954642.1-201ENST00000428088 SRCAPQ6ZRS2 3230 aa27■■□□□ 1.91
AL954642.1-201ENST00000428088 BARGINQ6ZT62 677 aa26.99■■□□□ 1.91
AL954642.1-201ENST00000428088 COL5A2P05997 1499 aaPredicted RBP26.99■■□□□ 1.91
AL954642.1-201ENST00000428088 MON2Q7Z3U7 1717 aa26.99■■□□□ 1.91
AL954642.1-201ENST00000428088 TCP11L2Q8N4U5 519 aa26.98■■□□□ 1.91
AL954642.1-201ENST00000428088 AATKQ6ZMQ8 1374 aa26.97■■□□□ 1.91
AL954642.1-201ENST00000428088 SOX12O15370 315 aa26.97■■□□□ 1.91
AL954642.1-201ENST00000428088 ST20-MTHFSA0A0A6YYL1 179 aa26.96■■□□□ 1.91
AL954642.1-201ENST00000428088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.96■■□□□ 1.91
AL954642.1-201ENST00000428088 SLC12A5Q9H2X9 1139 aa26.96■■□□□ 1.91
AL954642.1-201ENST00000428088 COL18A1P39060 1754 aa26.96■■□□□ 1.91
AL954642.1-201ENST00000428088 CD163L1Q9NR16 1453 aa26.95■■□□□ 1.91
AL954642.1-201ENST00000428088 KCNH5Q8NCM2 988 aa26.94■■□□□ 1.9
AL954642.1-201ENST00000428088 AXIN2Q9Y2T1 843 aa26.94■■□□□ 1.9
AL954642.1-201ENST00000428088 BAG6P46379 1132 aa26.93■■□□□ 1.9
AL954642.1-201ENST00000428088 ARHGEF25Q86VW2 580 aa26.93■■□□□ 1.9
AL954642.1-201ENST00000428088 TESK2Q96S53 571 aa26.93■■□□□ 1.9
AL954642.1-201ENST00000428088 THRAP3Q9Y2W1 955 aaKnown RBP26.93■■□□□ 1.9
AL954642.1-201ENST00000428088 RGPD1P0DJD0 1748 aa26.93■■□□□ 1.9
AL954642.1-201ENST00000428088 RGPD5Q99666 1765 aa26.92■■□□□ 1.9
AL954642.1-201ENST00000428088 PDE3BQ13370 1112 aa26.92■■□□□ 1.9
AL954642.1-201ENST00000428088 HDGFL2Q7Z4V5 671 aaPredicted RBP26.92■■□□□ 1.9
AL954642.1-201ENST00000428088 CRB1P82279 1406 aa26.91■■□□□ 1.9
AL954642.1-201ENST00000428088 FAM196AQ6ZSG2 479 aa26.91■■□□□ 1.9
AL954642.1-201ENST00000428088 NME9Q86XW9 330 aa26.9■■□□□ 1.9
AL954642.1-201ENST00000428088 PUS7Q96PZ0 661 aaKnown RBP26.9■■□□□ 1.9
AL954642.1-201ENST00000428088 PCGF6Q9BYE7 350 aa26.9■■□□□ 1.9
AL954642.1-201ENST00000428088 TOM1L2Q6ZVM7 507 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms