RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 BICD2Q8TD16 824 aa12□□□□□ -0.49
CLTCL1-202ENST00000427926 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
CLTCL1-202ENST00000427926 OFD1O75665 1012 aa11.99□□□□□ -0.49
CLTCL1-202ENST00000427926 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
CLTCL1-202ENST00000427926 CLASRPQ8N2M8 674 aaKnown RBP11.99□□□□□ -0.49
CLTCL1-202ENST00000427926 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.99□□□□□ -0.496e-6■■■□□ 19.2
CLTCL1-202ENST00000427926 KRT18P05783 430 aaKnown RBP11.99□□□□□ -0.49
CLTCL1-202ENST00000427926 RRBP1Q9P2E9 1410 aaKnown RBP11.99□□□□□ -0.49
CLTCL1-202ENST00000427926 PNISRQ8TF01 805 aaKnown RBP11.98□□□□□ -0.49
CLTCL1-202ENST00000427926 SLC52A1Q9NWF4 448 aa11.98□□□□□ -0.49
CLTCL1-202ENST00000427926 NINLQ9Y2I6 1382 aa11.98□□□□□ -0.49
CLTCL1-202ENST00000427926 EFCAB5A4FU69 1503 aa11.98□□□□□ -0.49
CLTCL1-202ENST00000427926 NAP1L1P55209 391 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 ZNF652Q9Y2D9 606 aa11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 KDM4AO75164 1064 aa11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 IPO9Q96P70 1041 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 NACAP1Q9BZK3 213 aa11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 POLA1P09884 1462 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 VPS37CA5D8V6 355 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 GNAI3P08754 354 aa11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 VSIG10Q8N0Z9 540 aa11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 SCAPERQ9BY12 1400 aa11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 CCDC57Q2TAC2 916 aa11.97□□□□□ -0.49
CLTCL1-202ENST00000427926 ANKRD50Q9ULJ7 1429 aa11.96□□□□□ -0.49
CLTCL1-202ENST00000427926 STARD3NLO95772 234 aa11.96□□□□□ -0.49
CLTCL1-202ENST00000427926 TMEM87AQ8NBN3 555 aa11.96□□□□□ -0.49
CLTCL1-202ENST00000427926 CDK19Q9BWU1 502 aa11.96□□□□□ -0.49
CLTCL1-202ENST00000427926 ARAP1Q96P48 1450 aa11.96□□□□□ -0.49
CLTCL1-202ENST00000427926 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-202ENST00000427926 MYL6BP14649 208 aa11.96□□□□□ -0.49
CLTCL1-202ENST00000427926 SNAPC4Q5SXM2 1469 aa11.96□□□□□ -0.49
CLTCL1-202ENST00000427926 CFAP70Q5T0N1 1121 aa11.96□□□□□ -0.5
CLTCL1-202ENST00000427926 SURF6O75683 361 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 RDXP35241 583 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 IGHMBP2P38935 993 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 PRKRIP1Q9H875 184 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 SMC3Q9UQE7 1217 aa11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 GOLGA6L3A6NEY3 463 aa11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 CENPQQ7L2Z9 268 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 UBAP1LF5GYI3 381 aa11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-202ENST00000427926 TOP2BQ02880 1626 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 ERC1Q8IUD2 1116 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 PSMA5P28066 241 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 CCDC73Q6ZRK6 1079 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 SOGA3Q5TF21 947 aa11.94□□□□□ -0.5
CLTCL1-202ENST00000427926 PRKAR2BP31323 418 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 TXLNAP40222 546 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 TOM1O60784 492 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 WDR78Q5VTH9 848 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 C16orf71Q8IYS4 520 aaPredicted RBP11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 MAGI1Q96QZ7 1491 aaPredicted RBP11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 ATP2B1P20020 1258 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 SYCP1Q15431 976 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 KCNH5Q8NCM2 988 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 STK11IPQ8N1F8 1099 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 UBE2Q2Q8WVN8 375 aa11.93□□□□□ -0.5
CLTCL1-202ENST00000427926 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
CLTCL1-202ENST00000427926 RAI14Q9P0K7 980 aa11.92□□□□□ -0.5
CLTCL1-202ENST00000427926 DDX11L8A8MPP1 907 aa11.92□□□□□ -0.5
CLTCL1-202ENST00000427926 PPP6R1Q9UPN7 881 aa11.92□□□□□ -0.5
CLTCL1-202ENST00000427926 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
CLTCL1-202ENST00000427926 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-202ENST00000427926 HOMEZQ8IX15 550 aa11.91□□□□□ -0.5
CLTCL1-202ENST00000427926 ZSCAN25Q6NSZ9 544 aa11.91□□□□□ -0.5
CLTCL1-202ENST00000427926 PDCL3Q9H2J4 239 aa11.91□□□□□ -0.5
CLTCL1-202ENST00000427926 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
CLTCL1-202ENST00000427926 HIP1O00291 1037 aa11.91□□□□□ -0.5
CLTCL1-202ENST00000427926 FANCIQ9NVI1 1328 aa11.91□□□□□ -0.5
CLTCL1-202ENST00000427926 RPGRQ92834 1020 aaKnown RBP11.91□□□□□ -0.5
CLTCL1-202ENST00000427926 SCLT1Q96NL6 688 aa11.91□□□□□ -0.5
CLTCL1-202ENST00000427926 CRACR2BQ8N4Y2 399 aaPredicted RBP11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 ZNF428Q96B54 188 aa11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 PLEKHH2Q8IVE3 1493 aa11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 PPM1FP49593 454 aaPredicted RBP11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 GRM1Q13255 1194 aa11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 AK7Q96M32 723 aa11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 BTBD11A6QL63 1104 aa11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 ARID3AQ99856 593 aa11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 ANKIB1Q9P2G1 1089 aa11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 EHBP1L1Q8N3D4 1523 aa11.9□□□□□ -0.5
CLTCL1-202ENST00000427926 ZNF76P36508 570 aa11.9□□□□□ -0.51
CLTCL1-202ENST00000427926 OLFM4Q6UX06 510 aa11.9□□□□□ -0.51
CLTCL1-202ENST00000427926 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
CLTCL1-202ENST00000427926 TRIM21P19474 475 aaKnown RBP11.89□□□□□ -0.51
CLTCL1-202ENST00000427926 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLTCL1-202ENST00000427926 SIL1Q9H173 461 aa11.89□□□□□ -0.51
CLTCL1-202ENST00000427926 HSP90AA2PQ14568 343 aaPredicted RBP11.89□□□□□ -0.51
CLTCL1-202ENST00000427926 ZHX3Q9H4I2 956 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms