RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 CCDC9Q9Y3X0 531 aaKnown RBP29.29■■■□□ 2.28
HSPG2-205ENST00000427897 BCL9LQ86UU0 1499 aa29.29■■■□□ 2.28
HSPG2-205ENST00000427897 ATRNO75882 1429 aa29.28■■■□□ 2.28
HSPG2-205ENST00000427897 POLR3AO14802 1390 aaPredicted RBP29.28■■■□□ 2.28
HSPG2-205ENST00000427897 CABP1Q9NZU7 370 aa29.28■■■□□ 2.28
HSPG2-205ENST00000427897 NUTM2GQ5VZR2 741 aa29.27■■■□□ 2.28
HSPG2-205ENST00000427897 GJD4Q96KN9 370 aaPredicted RBP29.27■■■□□ 2.28
HSPG2-205ENST00000427897 ABCA3Q99758 1704 aa29.26■■■□□ 2.27
HSPG2-205ENST00000427897 ABTB2Q8N961 1025 aa29.26■■■□□ 2.27
HSPG2-205ENST00000427897 RGS12O14924 1447 aa29.25■■■□□ 2.27
HSPG2-205ENST00000427897 FAM83GA6ND36 823 aa29.24■■■□□ 2.27
HSPG2-205ENST00000427897 SLIT2O94813 1529 aa29.24■■■□□ 2.27
HSPG2-205ENST00000427897 RALGAPBQ86X10 1494 aa29.23■■■□□ 2.27
HSPG2-205ENST00000427897 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.2■■■□□ 2.27
HSPG2-205ENST00000427897 PRDM11Q9NQV5 511 aa29.2■■■□□ 2.26
HSPG2-205ENST00000427897 PLCH1Q4KWH8 1693 aa29.19■■■□□ 2.26
HSPG2-205ENST00000427897 NLRP13Q86W25 1043 aa29.19■■■□□ 2.26
HSPG2-205ENST00000427897 BTG4Q9NY30 223 aa29.19■■■□□ 2.26
HSPG2-205ENST00000427897 UPF1Q92900 1129 aaKnown RBP eCLIP29.18■■■□□ 2.26
HSPG2-205ENST00000427897 NWD2Q9ULI1 1742 aa29.17■■■□□ 2.26
HSPG2-205ENST00000427897 VPS72Q15906 364 aa29.17■■■□□ 2.26
HSPG2-205ENST00000427897 ZNF692Q9BU19 519 aaPredicted RBP29.17■■■□□ 2.26
HSPG2-205ENST00000427897 BRD4O60885 1362 aaPredicted RBP29.16■■■□□ 2.26
HSPG2-205ENST00000427897 ATAD2Q6PL18 1390 aa29.16■■■□□ 2.26
HSPG2-205ENST00000427897 ZC3H6P61129 1189 aaKnown RBP29.16■■■□□ 2.26
HSPG2-205ENST00000427897 COL14A1Q05707 1796 aaKnown RBP29.15■■■□□ 2.26
HSPG2-205ENST00000427897 CLSPNQ9HAW4 1339 aa29.14■■■□□ 2.25
HSPG2-205ENST00000427897 A0A0G2JS52 829 aa29.13■■■□□ 2.25
HSPG2-205ENST00000427897 MYT1Q01538 1121 aa29.13■■■□□ 2.25
HSPG2-205ENST00000427897 NLRP6P59044 892 aa29.12■■■□□ 2.25
HSPG2-205ENST00000427897 CCER1Q8TC90 406 aaPredicted RBP29.12■■■□□ 2.25
HSPG2-205ENST00000427897 TMC1Q8TDI8 760 aa29.12■■■□□ 2.25
HSPG2-205ENST00000427897 KIAA0232Q92628 1395 aa29.12■■■□□ 2.25
HSPG2-205ENST00000427897 SBNO2Q9Y2G9 1366 aa29.12■■■□□ 2.25
HSPG2-205ENST00000427897 USP6P35125 1406 aa29.11■■■□□ 2.25
HSPG2-205ENST00000427897 CHRNA2Q15822 529 aa29.11■■■□□ 2.25
HSPG2-205ENST00000427897 PHRF1Q9P1Y6 1649 aaKnown RBP29.1■■■□□ 2.25
HSPG2-205ENST00000427897 SLC24A1O60721 1099 aa29.1■■■□□ 2.25
HSPG2-205ENST00000427897 TIMELESSQ9UNS1 1208 aa29.1■■■□□ 2.25
HSPG2-205ENST00000427897 CRYBG1Q9Y4K1 1723 aa29.1■■■□□ 2.25
HSPG2-205ENST00000427897 EVA1CP58658 441 aa29.09■■■□□ 2.25
HSPG2-205ENST00000427897 ZBTB7CA1YPR0 619 aa29.08■■■□□ 2.25
HSPG2-205ENST00000427897 ST20-MTHFSA0A0A6YYL1 179 aa29.07■■■□□ 2.24
HSPG2-205ENST00000427897 GLI3P10071 1580 aa29.07■■■□□ 2.24
HSPG2-205ENST00000427897 STRN4Q9NRL3 753 aa29.07■■■□□ 2.24
HSPG2-205ENST00000427897 KTN1Q86UP2 1357 aaKnown RBP29.06■■■□□ 2.24
HSPG2-205ENST00000427897 GCP02774 474 aa29.06■■■□□ 2.24
HSPG2-205ENST00000427897 SEPT12Q8IYM1 358 aa29.06■■■□□ 2.24
HSPG2-205ENST00000427897 HDGFL2Q7Z4V5 671 aaPredicted RBP29.05■■■□□ 2.24
HSPG2-205ENST00000427897 USP19O94966 1318 aa29.03■■■□□ 2.24
HSPG2-205ENST00000427897 TTC21BQ7Z4L5 1316 aa29.03■■■□□ 2.24
HSPG2-205ENST00000427897 FAM98CQ17RN3 349 aaKnown RBP29.02■■■□□ 2.24
HSPG2-205ENST00000427897 NRAPQ86VF7 1730 aa29.02■■■□□ 2.24
HSPG2-205ENST00000427897 TTC21AQ8NDW8 1320 aa29.01■■■□□ 2.23
HSPG2-205ENST00000427897 AKAP12Q02952 1782 aa29.01■■■□□ 2.23
HSPG2-205ENST00000427897 TERF2IPQ9NYB0 399 aa29■■■□□ 2.23
HSPG2-205ENST00000427897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.99■■■□□ 2.23
HSPG2-205ENST00000427897 PUS7Q96PZ0 661 aaKnown RBP28.99■■■□□ 2.23
HSPG2-205ENST00000427897 SLC12A5Q9H2X9 1139 aa28.99■■■□□ 2.23
HSPG2-205ENST00000427897 NRKQ7Z2Y5 1582 aa28.99■■■□□ 2.23
HSPG2-205ENST00000427897 ONECUT3O60422 494 aaPredicted RBP28.98■■■□□ 2.23
HSPG2-205ENST00000427897 SPATA31A5Q5VU36 1347 aa28.97■■■□□ 2.23
HSPG2-205ENST00000427897 SPATA31A7Q8IWB4 1347 aa28.97■■■□□ 2.23
HSPG2-205ENST00000427897 CPSF1Q10570 1443 aaKnown RBP28.97■■■□□ 2.23
HSPG2-205ENST00000427897 KCNH5Q8NCM2 988 aa28.97■■■□□ 2.23
HSPG2-205ENST00000427897 CPDO75976 1380 aa28.97■■■□□ 2.23
HSPG2-205ENST00000427897 USP47Q96K76 1375 aa28.97■■■□□ 2.23
HSPG2-205ENST00000427897 SSH2Q76I76 1423 aa28.96■■■□□ 2.23
HSPG2-205ENST00000427897 SOX12O15370 315 aa28.96■■■□□ 2.23
HSPG2-205ENST00000427897 TMF1P82094 1093 aa28.96■■■□□ 2.23
HSPG2-205ENST00000427897 USP35Q9P2H5 1018 aa28.96■■■□□ 2.23
HSPG2-205ENST00000427897 KRT27Q7Z3Y8 459 aa28.95■■■□□ 2.22
HSPG2-205ENST00000427897 TESK2Q96S53 571 aa28.95■■■□□ 2.22
HSPG2-205ENST00000427897 CCDC125Q86Z20 511 aa28.94■■■□□ 2.22
HSPG2-205ENST00000427897 PIK3C2AO00443 1686 aa28.93■■■□□ 2.22
HSPG2-205ENST00000427897 BRWD3Q6RI45 1802 aa28.93■■■□□ 2.22
HSPG2-205ENST00000427897 SPATA31A1Q5TZJ5 1347 aa28.92■■■□□ 2.22
HSPG2-205ENST00000427897 SF3B2Q13435 895 aaKnown RBP28.91■■■□□ 2.22
HSPG2-205ENST00000427897 MON2Q7Z3U7 1717 aa28.9■■■□□ 2.22
HSPG2-205ENST00000427897 CDCA8Q53HL2 280 aa28.89■■■□□ 2.22
HSPG2-205ENST00000427897 SLIT3O75094 1523 aa28.89■■■□□ 2.21
HSPG2-205ENST00000427897 LARP1Q6PKG0 1096 aaKnown RBP28.88■■■□□ 2.21
HSPG2-205ENST00000427897 CAMTA1Q9Y6Y1 1673 aa28.88■■■□□ 2.21
HSPG2-205ENST00000427897 NINLQ9Y2I6 1382 aa28.88■■■□□ 2.21
HSPG2-205ENST00000427897 NME9Q86XW9 330 aa28.86■■■□□ 2.21
HSPG2-205ENST00000427897 AATKQ6ZMQ8 1374 aa28.86■■■□□ 2.21
HSPG2-205ENST00000427897 EDC4Q6P2E9 1401 aaKnown RBP28.85■■■□□ 2.21
HSPG2-205ENST00000427897 TCP11L2Q8N4U5 519 aa28.84■■■□□ 2.21
HSPG2-205ENST00000427897 ZRANB1Q9UGI0 708 aa28.84■■■□□ 2.21
HSPG2-205ENST00000427897 A0A1W2PP64 1363 aa28.84■■■□□ 2.21
HSPG2-205ENST00000427897 CD163L1Q9NR16 1453 aa28.84■■■□□ 2.21
HSPG2-205ENST00000427897 LMO7Q8WWI1 1683 aa28.83■■■□□ 2.21
HSPG2-205ENST00000427897 TOM1L2Q6ZVM7 507 aa28.82■■■□□ 2.2
HSPG2-205ENST00000427897 CSB-PGBD3P0DP91 1061 aa28.81■■■□□ 2.2
HSPG2-205ENST00000427897 ARHGEF25Q86VW2 580 aa28.81■■■□□ 2.2
HSPG2-205ENST00000427897 THRAP3Q9Y2W1 955 aaKnown RBP28.81■■■□□ 2.2
HSPG2-205ENST00000427897 COL5A2P05997 1499 aaPredicted RBP28.8■■■□□ 2.2
HSPG2-205ENST00000427897 BLMP54132 1417 aaPredicted RBP28.8■■■□□ 2.2
HSPG2-205ENST00000427897 PDE3BQ13370 1112 aa28.8■■■□□ 2.2
HSPG2-205ENST00000427897 BARGINQ6ZT62 677 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms