RNA–Protein interactions for RNA: ENST00000427570.1

NXF3-202, Transcript of nuclear RNA export factor 3, humanhuman

TSL 1 (best)

Gene NXF3, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-202ENST00000427570 ITSN1Q15811 1721 aa11.89□□□□□ -0.51
NXF3-202ENST00000427570 ARHGEF28Q8N1W1 1705 aaKnown RBP11.89□□□□□ -0.51
NXF3-202ENST00000427570 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
NXF3-202ENST00000427570 KIAA1210Q9ULL0 1709 aa11.87□□□□□ -0.51
NXF3-202ENST00000427570 A0A0G2JS52 829 aa11.87□□□□□ -0.51
NXF3-202ENST00000427570 MYT1Q01538 1121 aa11.87□□□□□ -0.51
NXF3-202ENST00000427570 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
NXF3-202ENST00000427570 NRAPQ86VF7 1730 aa11.86□□□□□ -0.51
NXF3-202ENST00000427570 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
NXF3-202ENST00000427570 ATP7BP35670 1465 aa11.85□□□□□ -0.51
NXF3-202ENST00000427570 FAM98CQ17RN3 349 aaKnown RBP11.85□□□□□ -0.51
NXF3-202ENST00000427570 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
NXF3-202ENST00000427570 SPATA31A5Q5VU36 1347 aa11.85□□□□□ -0.51
NXF3-202ENST00000427570 SPATA31A7Q8IWB4 1347 aa11.85□□□□□ -0.51
NXF3-202ENST00000427570 CRYBG1Q9Y4K1 1723 aa11.84□□□□□ -0.51
NXF3-202ENST00000427570 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
NXF3-202ENST00000427570 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
NXF3-202ENST00000427570 ACEP12821 1306 aa11.84□□□□□ -0.51
NXF3-202ENST00000427570 POLR3AO14802 1390 aaPredicted RBP11.83□□□□□ -0.52
NXF3-202ENST00000427570 BAG6P46379 1132 aa11.83□□□□□ -0.52
NXF3-202ENST00000427570 EP400Q96L91 3159 aa11.83□□□□□ -0.52
NXF3-202ENST00000427570 NBPF1Q3BBV0 1214 aa11.82□□□□□ -0.52
NXF3-202ENST00000427570 ABTB2Q8N961 1025 aa11.82□□□□□ -0.52
NXF3-202ENST00000427570 KIAA0232Q92628 1395 aa11.81□□□□□ -0.52
NXF3-202ENST00000427570 EVA1CP58658 441 aa11.81□□□□□ -0.52
NXF3-202ENST00000427570 SRPK2P78362 688 aaKnown RBP11.81□□□□□ -0.52
NXF3-202ENST00000427570 SPATA31A1Q5TZJ5 1347 aa11.81□□□□□ -0.52
NXF3-202ENST00000427570 TOPAZ1Q8N9V7 1692 aa11.81□□□□□ -0.52
NXF3-202ENST00000427570 ZC3H6P61129 1189 aaKnown RBP11.8□□□□□ -0.52
NXF3-202ENST00000427570 NUTM2GQ5VZR2 741 aa11.8□□□□□ -0.52
NXF3-202ENST00000427570 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
NXF3-202ENST00000427570 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
NXF3-202ENST00000427570 PHRF1Q9P1Y6 1649 aaKnown RBP11.79□□□□□ -0.52
NXF3-202ENST00000427570 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
NXF3-202ENST00000427570 NLRP13Q86W25 1043 aa11.79□□□□□ -0.52
NXF3-202ENST00000427570 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
NXF3-202ENST00000427570 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
NXF3-202ENST00000427570 RGPD1P0DJD0 1748 aa11.78□□□□□ -0.52
NXF3-202ENST00000427570 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
NXF3-202ENST00000427570 BARGINQ6ZT62 677 aa11.78□□□□□ -0.52
NXF3-202ENST00000427570 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.52
NXF3-202ENST00000427570 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
NXF3-202ENST00000427570 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
NXF3-202ENST00000427570 CPDO75976 1380 aa11.77□□□□□ -0.53
NXF3-202ENST00000427570 EN1Q05925 392 aaPredicted RBP11.76□□□□□ -0.53
NXF3-202ENST00000427570 PDE3BQ13370 1112 aa11.76□□□□□ -0.53
NXF3-202ENST00000427570 L3MBTL2Q969R5 705 aa11.76□□□□□ -0.53
NXF3-202ENST00000427570 USP35Q9P2H5 1018 aa11.76□□□□□ -0.53
NXF3-202ENST00000427570 USP19O94966 1318 aa11.76□□□□□ -0.53
NXF3-202ENST00000427570 GCP02774 474 aa11.75□□□□□ -0.53
NXF3-202ENST00000427570 TCP11L2Q8N4U5 519 aa11.75□□□□□ -0.53
NXF3-202ENST00000427570 CABP1Q9NZU7 370 aa11.75□□□□□ -0.53
NXF3-202ENST00000427570 THRAP3Q9Y2W1 955 aaKnown RBP11.75□□□□□ -0.53
NXF3-202ENST00000427570 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
NXF3-202ENST00000427570 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
NXF3-202ENST00000427570 EVC2Q86UK5 1308 aa11.74□□□□□ -0.53
NXF3-202ENST00000427570 DISP2A7MBM2 1401 aa11.74□□□□□ -0.53
NXF3-202ENST00000427570 NRKQ7Z2Y5 1582 aa11.74□□□□□ -0.53
NXF3-202ENST00000427570 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
NXF3-202ENST00000427570 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
NXF3-202ENST00000427570 PSDA5PKW4 1024 aaPredicted RBP11.73□□□□□ -0.53
NXF3-202ENST00000427570 C11orf95C9JLR9 678 aaPredicted RBP11.73□□□□□ -0.53
NXF3-202ENST00000427570 TRIM37O94972 964 aa11.73□□□□□ -0.53
NXF3-202ENST00000427570 NLRP6P59044 892 aa11.73□□□□□ -0.53
NXF3-202ENST00000427570 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
NXF3-202ENST00000427570 LMO7Q8WWI1 1683 aa11.72□□□□□ -0.53
NXF3-202ENST00000427570 LRP5O75197 1615 aa11.72□□□□□ -0.53
NXF3-202ENST00000427570 USP6P35125 1406 aa11.72□□□□□ -0.53
NXF3-202ENST00000427570 PARD3Q8TEW0 1356 aa11.72□□□□□ -0.53
NXF3-202ENST00000427570 APBA3O96018 575 aa11.72□□□□□ -0.53
NXF3-202ENST00000427570 EZH2Q15910 746 aaKnown RBP11.72□□□□□ -0.53
NXF3-202ENST00000427570 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
NXF3-202ENST00000427570 SIN3AQ96ST3 1273 aa11.72□□□□□ -0.53
NXF3-202ENST00000427570 TNS1Q9HBL0 1735 aaKnown RBP11.72□□□□□ -0.53
NXF3-202ENST00000427570 NEUROD1Q13562 356 aa11.71□□□□□ -0.53
NXF3-202ENST00000427570 TRPM1Q7Z4N2 1603 aa11.71□□□□□ -0.54
NXF3-202ENST00000427570 AATKQ6ZMQ8 1374 aa11.7□□□□□ -0.54
NXF3-202ENST00000427570 COL5A2P05997 1499 aaPredicted RBP11.7□□□□□ -0.54
NXF3-202ENST00000427570 CRB1P82279 1406 aa11.69□□□□□ -0.54
NXF3-202ENST00000427570 ROCK2O75116 1388 aaKnown RBP11.69□□□□□ -0.54
NXF3-202ENST00000427570 ZBTB7CA1YPR0 619 aa11.69□□□□□ -0.54
NXF3-202ENST00000427570 R3HDM1Q15032 1099 aaKnown RBP11.69□□□□□ -0.54
NXF3-202ENST00000427570 KCNH5Q8NCM2 988 aa11.69□□□□□ -0.54
NXF3-202ENST00000427570 NBPF14Q5TI25 921 aa11.68□□□□□ -0.54
NXF3-202ENST00000427570 SLIT3O75094 1523 aa11.68□□□□□ -0.54
NXF3-202ENST00000427570 PARP4Q9UKK3 1724 aaKnown RBP11.68□□□□□ -0.54
NXF3-202ENST00000427570 TTC21BQ7Z4L5 1316 aa11.67□□□□□ -0.54
NXF3-202ENST00000427570 TTC21AQ8NDW8 1320 aa11.67□□□□□ -0.54
NXF3-202ENST00000427570 TOM1L2Q6ZVM7 507 aa11.67□□□□□ -0.54
NXF3-202ENST00000427570 CDCA7Q9BWT1 371 aaPredicted RBP11.67□□□□□ -0.54
NXF3-202ENST00000427570 DDB1Q16531 1140 aa11.66□□□□□ -0.54
NXF3-202ENST00000427570 ARHGEF25Q86VW2 580 aa11.66□□□□□ -0.54
NXF3-202ENST00000427570 SRCAPQ6ZRS2 3230 aa11.66□□□□□ -0.54
NXF3-202ENST00000427570 PIK3C2AO00443 1686 aa11.65□□□□□ -0.54
NXF3-202ENST00000427570 WDR17Q8IZU2 1322 aa11.65□□□□□ -0.54
NXF3-202ENST00000427570 AKAP12Q02952 1782 aa11.65□□□□□ -0.54
NXF3-202ENST00000427570 COL18A1P39060 1754 aa11.64□□□□□ -0.55
NXF3-202ENST00000427570 OVOS2A0A0G2JMS6 1433 aa11.64□□□□□ -0.55
NXF3-202ENST00000427570 OVOS2A0A0J9YW53 1432 aa11.64□□□□□ -0.55
NXF3-202ENST00000427570 CPSF1Q10570 1443 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms