RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 SBNO2Q9Y2G9 1366 aa22.09■■□□□ 1.13
CLK3P2-201ENST00000427566 PLEKHG3A1L390 1219 aa22.08■■□□□ 1.12
CLK3P2-201ENST00000427566 CABP1Q9NZU7 370 aa22.07■■□□□ 1.12
CLK3P2-201ENST00000427566 USP21Q9UK80 565 aa22.07■■□□□ 1.12
CLK3P2-201ENST00000427566 POLR3AO14802 1390 aaPredicted RBP22.07■■□□□ 1.12
CLK3P2-201ENST00000427566 QTRT2Q9H974 415 aaKnown RBP22.05■■□□□ 1.12
CLK3P2-201ENST00000427566 RXRBP28702 533 aa22.04■■□□□ 1.12
CLK3P2-201ENST00000427566 NUTM2GQ5VZR2 741 aa22.04■■□□□ 1.12
CLK3P2-201ENST00000427566 CRYBG1Q9Y4K1 1723 aa22.04■■□□□ 1.12
CLK3P2-201ENST00000427566 PLCH1Q4KWH8 1693 aa22.04■■□□□ 1.12
CLK3P2-201ENST00000427566 AKAP12Q02952 1782 aa22.02■■□□□ 1.12
CLK3P2-201ENST00000427566 HSPA5P11021 654 aaKnown RBP22.02■■□□□ 1.12
CLK3P2-201ENST00000427566 PHRF1Q9P1Y6 1649 aaKnown RBP22.01■■□□□ 1.11
CLK3P2-201ENST00000427566 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
CLK3P2-201ENST00000427566 EIF4G2P78344 907 aaKnown RBP eCLIP22■■□□□ 1.11
CLK3P2-201ENST00000427566 ABTB2Q8N961 1025 aa22■■□□□ 1.11
CLK3P2-201ENST00000427566 ATAD2Q6PL18 1390 aa21.99■■□□□ 1.11
CLK3P2-201ENST00000427566 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.99■■□□□ 1.11
CLK3P2-201ENST00000427566 TRPC5Q9UL62 973 aaPredicted RBP21.99■■□□□ 1.11
CLK3P2-201ENST00000427566 RBM6P78332 1123 aaKnown RBP21.97■■□□□ 1.11
CLK3P2-201ENST00000427566 TMC1Q8TDI8 760 aa21.97■■□□□ 1.11
CLK3P2-201ENST00000427566 NWD2Q9ULI1 1742 aa21.97■■□□□ 1.11
CLK3P2-201ENST00000427566 USP6P35125 1406 aa21.97■■□□□ 1.11
CLK3P2-201ENST00000427566 BCL9LQ86UU0 1499 aa21.96■■□□□ 1.11
CLK3P2-201ENST00000427566 COL14A1Q05707 1796 aaKnown RBP21.96■■□□□ 1.11
CLK3P2-201ENST00000427566 SLIT2O94813 1529 aa21.95■■□□□ 1.1
CLK3P2-201ENST00000427566 TMF1P82094 1093 aa21.95■■□□□ 1.1
CLK3P2-201ENST00000427566 ATRNO75882 1429 aa21.94■■□□□ 1.1
CLK3P2-201ENST00000427566 MON2Q7Z3U7 1717 aa21.94■■□□□ 1.1
CLK3P2-201ENST00000427566 FAM83GA6ND36 823 aa21.94■■□□□ 1.1
CLK3P2-201ENST00000427566 UNC5CLQ8IV45 518 aa21.94■■□□□ 1.1
CLK3P2-201ENST00000427566 NLRP13Q86W25 1043 aa21.92■■□□□ 1.1
CLK3P2-201ENST00000427566 ZNF692Q9BU19 519 aaPredicted RBP21.92■■□□□ 1.1
CLK3P2-201ENST00000427566 SLC12A5Q9H2X9 1139 aa21.92■■□□□ 1.1
CLK3P2-201ENST00000427566 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
CLK3P2-201ENST00000427566 PIK3C2AO00443 1686 aa21.92■■□□□ 1.1
CLK3P2-201ENST00000427566 BRD4O60885 1362 aaPredicted RBP21.91■■□□□ 1.1
CLK3P2-201ENST00000427566 KTN1Q86UP2 1357 aaKnown RBP21.91■■□□□ 1.1
CLK3P2-201ENST00000427566 ZC3H6P61129 1189 aaKnown RBP21.91■■□□□ 1.1
CLK3P2-201ENST00000427566 PRDM11Q9NQV5 511 aa21.91■■□□□ 1.1
CLK3P2-201ENST00000427566 SLC24A1O60721 1099 aa21.9■■□□□ 1.1
CLK3P2-201ENST00000427566 PUS7Q96PZ0 661 aaKnown RBP21.9■■□□□ 1.1
CLK3P2-201ENST00000427566 RGS12O14924 1447 aa21.9■■□□□ 1.1
CLK3P2-201ENST00000427566 NRKQ7Z2Y5 1582 aa21.9■■□□□ 1.1
CLK3P2-201ENST00000427566 NRAPQ86VF7 1730 aa21.9■■□□□ 1.1
CLK3P2-201ENST00000427566 CDK12Q9NYV4 1490 aaPredicted RBP21.9■■□□□ 1.1
CLK3P2-201ENST00000427566 NLRP6P59044 892 aa21.9■■□□□ 1.1
CLK3P2-201ENST00000427566 BTG4Q9NY30 223 aa21.9■■□□□ 1.1
CLK3P2-201ENST00000427566 CD163L1Q9NR16 1453 aa21.89■■□□□ 1.1
CLK3P2-201ENST00000427566 KIAA0232Q92628 1395 aa21.89■■□□□ 1.09
CLK3P2-201ENST00000427566 C11orf95C9JLR9 678 aaPredicted RBP21.89■■□□□ 1.09
CLK3P2-201ENST00000427566 CHRNA2Q15822 529 aa21.89■■□□□ 1.09
CLK3P2-201ENST00000427566 GJD4Q96KN9 370 aaPredicted RBP21.89■■□□□ 1.09
CLK3P2-201ENST00000427566 ZBTB7CA1YPR0 619 aa21.88■■□□□ 1.09
CLK3P2-201ENST00000427566 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
CLK3P2-201ENST00000427566 TTC21BQ7Z4L5 1316 aa21.88■■□□□ 1.09
CLK3P2-201ENST00000427566 CPSF1Q10570 1443 aaKnown RBP21.87■■□□□ 1.09
CLK3P2-201ENST00000427566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.87■■□□□ 1.09
CLK3P2-201ENST00000427566 GLI3P10071 1580 aa21.86■■□□□ 1.09
CLK3P2-201ENST00000427566 SSH2Q76I76 1423 aa21.86■■□□□ 1.09
CLK3P2-201ENST00000427566 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
CLK3P2-201ENST00000427566 USP19O94966 1318 aa21.84■■□□□ 1.09
CLK3P2-201ENST00000427566 SOX12O15370 315 aa21.83■■□□□ 1.09
CLK3P2-201ENST00000427566 GCP02774 474 aa21.83■■□□□ 1.09
CLK3P2-201ENST00000427566 VPS72Q15906 364 aa21.83■■□□□ 1.09
CLK3P2-201ENST00000427566 POLR3GLQ9BT43 218 aa21.83■■□□□ 1.09
CLK3P2-201ENST00000427566 TTC21AQ8NDW8 1320 aa21.83■■□□□ 1.09
CLK3P2-201ENST00000427566 A0A1W2PP64 1363 aa21.83■■□□□ 1.09
CLK3P2-201ENST00000427566 CDCA8Q53HL2 280 aa21.83■■□□□ 1.08
CLK3P2-201ENST00000427566 STRN4Q9NRL3 753 aa21.83■■□□□ 1.08
CLK3P2-201ENST00000427566 MYOM1P52179 1685 aa21.83■■□□□ 1.08
CLK3P2-201ENST00000427566 BRWD3Q6RI45 1802 aa21.83■■□□□ 1.08
CLK3P2-201ENST00000427566 SLIT3O75094 1523 aa21.8■■□□□ 1.08
CLK3P2-201ENST00000427566 A0A0G2JS52 829 aa21.8■■□□□ 1.08
CLK3P2-201ENST00000427566 MYT1Q01538 1121 aa21.8■■□□□ 1.08
CLK3P2-201ENST00000427566 RGPD5Q99666 1765 aa21.79■■□□□ 1.08
CLK3P2-201ENST00000427566 EVA1CP58658 441 aa21.79■■□□□ 1.08
CLK3P2-201ENST00000427566 NINLQ9Y2I6 1382 aa21.79■■□□□ 1.08
CLK3P2-201ENST00000427566 NME9Q86XW9 330 aa21.78■■□□□ 1.08
CLK3P2-201ENST00000427566 ZRANB1Q9UGI0 708 aa21.78■■□□□ 1.08
CLK3P2-201ENST00000427566 LMO7Q8WWI1 1683 aa21.77■■□□□ 1.08
CLK3P2-201ENST00000427566 EDC4Q6P2E9 1401 aaKnown RBP21.77■■□□□ 1.08
CLK3P2-201ENST00000427566 CPDO75976 1380 aa21.77■■□□□ 1.08
CLK3P2-201ENST00000427566 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
CLK3P2-201ENST00000427566 CAMTA1Q9Y6Y1 1673 aa21.76■■□□□ 1.07
CLK3P2-201ENST00000427566 KIF7Q2M1P5 1343 aa21.75■■□□□ 1.07
CLK3P2-201ENST00000427566 LTN1O94822 1766 aa21.75■■□□□ 1.07
CLK3P2-201ENST00000427566 KCNH5Q8NCM2 988 aa21.75■■□□□ 1.07
CLK3P2-201ENST00000427566 USP54Q70EL1 1684 aa21.75■■□□□ 1.07
CLK3P2-201ENST00000427566 FAM98CQ17RN3 349 aaKnown RBP21.74■■□□□ 1.07
CLK3P2-201ENST00000427566 SEPT12Q8IYM1 358 aa21.74■■□□□ 1.07
CLK3P2-201ENST00000427566 USP35Q9P2H5 1018 aa21.74■■□□□ 1.07
CLK3P2-201ENST00000427566 UPF1Q92900 1129 aaKnown RBP eCLIP21.73■■□□□ 1.07
CLK3P2-201ENST00000427566 SPATA31A5Q5VU36 1347 aa21.73■■□□□ 1.07
CLK3P2-201ENST00000427566 SPATA31A7Q8IWB4 1347 aa21.73■■□□□ 1.07
CLK3P2-201ENST00000427566 CARD14Q9BXL6 1004 aa21.72■■□□□ 1.07
CLK3P2-201ENST00000427566 COL18A1P39060 1754 aa21.72■■□□□ 1.07
CLK3P2-201ENST00000427566 KIF20BQ96Q89 1820 aa21.71■■□□□ 1.07
CLK3P2-201ENST00000427566 USP31Q70CQ4 1352 aa21.71■■□□□ 1.07
CLK3P2-201ENST00000427566 NFAT5O94916 1531 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms