RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 USP54Q70EL1 1684 aa23.14■■□□□ 1.3
CHEK1-202ENST00000427383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.14■■□□□ 1.291e-6■■■■■ 28.9
CHEK1-202ENST00000427383 TTC21BQ7Z4L5 1316 aa23.13■■□□□ 1.29
CHEK1-202ENST00000427383 OVOS2A0A0J9YW53 1432 aa23.13■■□□□ 1.29
CHEK1-202ENST00000427383 OVOS2Q6IE36 1432 aa23.13■■□□□ 1.29
CHEK1-202ENST00000427383 PHF8Q9UPP1 1060 aa23.12■■□□□ 1.29
CHEK1-202ENST00000427383 MSH6P52701 1360 aa23.12■■□□□ 1.29
CHEK1-202ENST00000427383 MARF1Q9Y4F3 1742 aaKnown RBP23.11■■□□□ 1.29
CHEK1-202ENST00000427383 NME9Q86XW9 330 aa23.11■■□□□ 1.29
CHEK1-202ENST00000427383 NGDNQ8NEJ9 315 aaKnown RBP23.11■■□□□ 1.29
CHEK1-202ENST00000427383 SHPRHQ149N8 1683 aa23.1■■□□□ 1.29
CHEK1-202ENST00000427383 TTC21AQ8NDW8 1320 aa23.09■■□□□ 1.29
CHEK1-202ENST00000427383 SCAF1Q9H7N4 1312 aaKnown RBP23.09■■□□□ 1.29
CHEK1-202ENST00000427383 FAM9BQ8IZU0 186 aa23.09■■□□□ 1.29
CHEK1-202ENST00000427383 ATF3P18847 181 aa23.08■■□□□ 1.29
CHEK1-202ENST00000427383 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
CHEK1-202ENST00000427383 TRPM3Q9HCF6 1732 aaPredicted RBP23.08■■□□□ 1.29
CHEK1-202ENST00000427383 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.28
CHEK1-202ENST00000427383 ESCO1Q5FWF5 840 aa23.07■■□□□ 1.28
CHEK1-202ENST00000427383 TNNT2P45379 298 aaPredicted RBP23.06■■□□□ 1.28
CHEK1-202ENST00000427383 ORAI2Q96SN7 254 aa23.06■■□□□ 1.28
CHEK1-202ENST00000427383 MAP2P11137 1827 aaKnown RBP23.06■■□□□ 1.28
CHEK1-202ENST00000427383 SMG6Q86US8 1419 aaKnown RBP23.05■■□□□ 1.28
CHEK1-202ENST00000427383 INSRP06213 1382 aa23.05■■□□□ 1.28
CHEK1-202ENST00000427383 USP31Q70CQ4 1352 aa23.05■■□□□ 1.28
CHEK1-202ENST00000427383 ZRANB1Q9UGI0 708 aa23.05■■□□□ 1.28
CHEK1-202ENST00000427383 AATKQ6ZMQ8 1374 aa23.05■■□□□ 1.28
CHEK1-202ENST00000427383 COL3A1P02461 1466 aaPredicted RBP23.04■■□□□ 1.28
CHEK1-202ENST00000427383 COG3Q96JB2 828 aa23.03■■□□□ 1.28
CHEK1-202ENST00000427383 MTHFSP49914 203 aa23.02■■□□□ 1.28
CHEK1-202ENST00000427383 BLMP54132 1417 aaPredicted RBP23.01■■□□□ 1.27
CHEK1-202ENST00000427383 PNPLA6Q8IY17 1366 aa23■■□□□ 1.27
CHEK1-202ENST00000427383 ALS2Q96Q42 1657 aa22.99■■□□□ 1.27
CHEK1-202ENST00000427383 CDK12Q9NYV4 1490 aaPredicted RBP22.98■■□□□ 1.27
CHEK1-202ENST00000427383 FOXO3O43524 673 aa22.97■■□□□ 1.27
CHEK1-202ENST00000427383 HNRNPUQ00839 825 aaKnown RBP eCLIP22.97■■□□□ 1.27
CHEK1-202ENST00000427383 POLKQ9UBT6 870 aa22.97■■□□□ 1.27
CHEK1-202ENST00000427383 PXDNQ92626 1479 aa22.95■■□□□ 1.26
CHEK1-202ENST00000427383 CENPBP07199 599 aaPredicted RBP22.95■■□□□ 1.26
CHEK1-202ENST00000427383 PSME1Q06323 249 aa22.95■■□□□ 1.26
CHEK1-202ENST00000427383 PEAK1Q9H792 1746 aa22.95■■□□□ 1.26
CHEK1-202ENST00000427383 FBLN1P23142 703 aa22.94■■□□□ 1.26
CHEK1-202ENST00000427383 ADAMTS8Q9UP79 889 aa22.93■■□□□ 1.26
CHEK1-202ENST00000427383 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
CHEK1-202ENST00000427383 WDR43Q15061 677 aaKnown RBP eCLIP22.92■■□□□ 1.26
CHEK1-202ENST00000427383 BRINP3Q76B58 766 aa22.92■■□□□ 1.26
CHEK1-202ENST00000427383 NHSL1Q5SYE7 1610 aa22.92■■□□□ 1.26
CHEK1-202ENST00000427383 ABTB2Q8N961 1025 aa22.91■■□□□ 1.26
CHEK1-202ENST00000427383 SLAIN2Q9P270 581 aa22.91■■□□□ 1.26
CHEK1-202ENST00000427383 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
CHEK1-202ENST00000427383 SLIT3O75094 1523 aa22.91■■□□□ 1.26
CHEK1-202ENST00000427383 NFAT5O94916 1531 aa22.91■■□□□ 1.26
CHEK1-202ENST00000427383 PAK3O75914 559 aaPredicted RBP22.9■■□□□ 1.26
CHEK1-202ENST00000427383 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
CHEK1-202ENST00000427383 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
CHEK1-202ENST00000427383 NLRP6P59044 892 aa22.9■■□□□ 1.26
CHEK1-202ENST00000427383 SBNO1A3KN83 1393 aa22.89■■□□□ 1.25
CHEK1-202ENST00000427383 XPCQ01831 940 aaPredicted RBP22.89■■□□□ 1.25
CHEK1-202ENST00000427383 KRT28Q7Z3Y7 464 aa22.89■■□□□ 1.25
CHEK1-202ENST00000427383 PHRF1Q9P1Y6 1649 aaKnown RBP22.89■■□□□ 1.25
CHEK1-202ENST00000427383 RRS1Q15050 365 aaKnown RBP22.88■■□□□ 1.25
CHEK1-202ENST00000427383 LTN1O94822 1766 aa22.88■■□□□ 1.25
CHEK1-202ENST00000427383 CRYBG1Q9Y4K1 1723 aa22.88■■□□□ 1.25
CHEK1-202ENST00000427383 DDX17Q92841 729 aaKnown RBP22.86■■□□□ 1.25
CHEK1-202ENST00000427383 TNS3Q68CZ2 1445 aa22.86■■□□□ 1.25
CHEK1-202ENST00000427383 USP19O94966 1318 aa22.85■■□□□ 1.25
CHEK1-202ENST00000427383 MED1Q15648 1581 aaPredicted RBP22.85■■□□□ 1.25
CHEK1-202ENST00000427383 NUTM2GQ5VZR2 741 aa22.84■■□□□ 1.25
CHEK1-202ENST00000427383 MAP3K19Q56UN5 1328 aa22.84■■□□□ 1.25
CHEK1-202ENST00000427383 KIF24Q5T7B8 1368 aa22.83■■□□□ 1.25
CHEK1-202ENST00000427383 RGPD1P0DJD0 1748 aa22.83■■□□□ 1.25
CHEK1-202ENST00000427383 ROBO1Q9Y6N7 1651 aa22.83■■□□□ 1.25
CHEK1-202ENST00000427383 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.24
CHEK1-202ENST00000427383 PPM1GO15355 546 aaPredicted RBP22.82■■□□□ 1.24
CHEK1-202ENST00000427383 DIAPH1O60610 1272 aaKnown RBP22.82■■□□□ 1.24
CHEK1-202ENST00000427383 IQSEC2Q5JU85 1478 aa22.82■■□□□ 1.24
CHEK1-202ENST00000427383 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
CHEK1-202ENST00000427383 FLT4P35916 1363 aa22.81■■□□□ 1.24
CHEK1-202ENST00000427383 SPATA31A3Q5VYP0 1347 aa22.79■■□□□ 1.24
CHEK1-202ENST00000427383 SOX12O15370 315 aa22.79■■□□□ 1.24
CHEK1-202ENST00000427383 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
CHEK1-202ENST00000427383 RTL1A6NKG5 1358 aa22.78■■□□□ 1.24
CHEK1-202ENST00000427383 IL13P35225 146 aa22.78■■□□□ 1.24
CHEK1-202ENST00000427383 AHDC1Q5TGY3 1603 aaPredicted RBP22.78■■□□□ 1.24
CHEK1-202ENST00000427383 KCNH5Q8NCM2 988 aa22.77■■□□□ 1.24
CHEK1-202ENST00000427383 ARHGEF10O15013 1369 aa22.77■■□□□ 1.24
CHEK1-202ENST00000427383 U2AF1L5P0DN76 240 aaPredicted RBP22.76■■□□□ 1.23
CHEK1-202ENST00000427383 U2AF1Q01081 240 aaKnown RBP eCLIP22.76■■□□□ 1.238e-7■□□□□ 8.6
CHEK1-202ENST00000427383 ABCA3Q99758 1704 aa22.76■■□□□ 1.23
CHEK1-202ENST00000427383 CCDC146Q8IYE0 955 aa22.75■■□□□ 1.23
CHEK1-202ENST00000427383 U2SURPO15042 1029 aaKnown RBP22.74■■□□□ 1.23
CHEK1-202ENST00000427383 GCP02774 474 aa22.74■■□□□ 1.23
CHEK1-202ENST00000427383 HSP90AB2PQ58FF8 381 aa22.74■■□□□ 1.23
CHEK1-202ENST00000427383 SENP3-EIF4A1A0A087X0R7 540 aa22.74■■□□□ 1.23
CHEK1-202ENST00000427383 EIF4A2Q14240 407 aaKnown RBP22.74■■□□□ 1.23
CHEK1-202ENST00000427383 LMOD2Q6P5Q4 547 aa22.73■■□□□ 1.23
CHEK1-202ENST00000427383 RUNDC1Q96C34 613 aa22.73■■□□□ 1.23
CHEK1-202ENST00000427383 HOXC9P31274 260 aa22.72■■□□□ 1.23
CHEK1-202ENST00000427383 PLEKHF1Q96S99 279 aa22.72■■□□□ 1.23
CHEK1-202ENST00000427383 ZNF521Q96K83 1311 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms