RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 BTG4Q9NY30 223 aa13.02□□□□□ -0.33
COPS6-204ENST00000426712 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
COPS6-204ENST00000426712 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
COPS6-204ENST00000426712 SPATA31A5Q5VU36 1347 aa13□□□□□ -0.33
COPS6-204ENST00000426712 SPATA31A7Q8IWB4 1347 aa13□□□□□ -0.33
COPS6-204ENST00000426712 PLEKHG5O94827 1062 aa13□□□□□ -0.33
COPS6-204ENST00000426712 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
COPS6-204ENST00000426712 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
COPS6-204ENST00000426712 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
COPS6-204ENST00000426712 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
COPS6-204ENST00000426712 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
COPS6-204ENST00000426712 THSD7AQ9UPZ6 1657 aa12.98□□□□□ -0.33
COPS6-204ENST00000426712 LRP5O75197 1615 aa12.97□□□□□ -0.33
COPS6-204ENST00000426712 ATP7BP35670 1465 aa12.97□□□□□ -0.33
COPS6-204ENST00000426712 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.33
COPS6-204ENST00000426712 PHRF1Q9P1Y6 1649 aaKnown RBP12.96□□□□□ -0.33
COPS6-204ENST00000426712 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
COPS6-204ENST00000426712 CDK19Q9BWU1 502 aa12.96□□□□□ -0.33
COPS6-204ENST00000426712 POLR3AO14802 1390 aaPredicted RBP12.95□□□□□ -0.34
COPS6-204ENST00000426712 PLEKHG3A1L390 1219 aa12.95□□□□□ -0.34
COPS6-204ENST00000426712 BAG6P46379 1132 aa12.95□□□□□ -0.34
COPS6-204ENST00000426712 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
COPS6-204ENST00000426712 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
COPS6-204ENST00000426712 SPATA31A1Q5TZJ5 1347 aa12.94□□□□□ -0.34
COPS6-204ENST00000426712 PRDM11Q9NQV5 511 aa12.94□□□□□ -0.34
COPS6-204ENST00000426712 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
COPS6-204ENST00000426712 DISP2A7MBM2 1401 aa12.94□□□□□ -0.34
COPS6-204ENST00000426712 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
COPS6-204ENST00000426712 ACEP12821 1306 aa12.92□□□□□ -0.34
COPS6-204ENST00000426712 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
COPS6-204ENST00000426712 A0A0G2JS52 829 aa12.91□□□□□ -0.34
COPS6-204ENST00000426712 MYT1Q01538 1121 aa12.91□□□□□ -0.34
COPS6-204ENST00000426712 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
COPS6-204ENST00000426712 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
COPS6-204ENST00000426712 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
COPS6-204ENST00000426712 BARGINQ6ZT62 677 aa12.91□□□□□ -0.34
COPS6-204ENST00000426712 LMO7Q8WWI1 1683 aa12.9□□□□□ -0.34
COPS6-204ENST00000426712 ZC3H6P61129 1189 aaKnown RBP12.9□□□□□ -0.34
COPS6-204ENST00000426712 FAM196AQ6ZSG2 479 aa12.9□□□□□ -0.34
COPS6-204ENST00000426712 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
COPS6-204ENST00000426712 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
COPS6-204ENST00000426712 CPDO75976 1380 aa12.89□□□□□ -0.35
COPS6-204ENST00000426712 PSDA5PKW4 1024 aaPredicted RBP12.88□□□□□ -0.35
COPS6-204ENST00000426712 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
COPS6-204ENST00000426712 ABTB2Q8N961 1025 aa12.88□□□□□ -0.35
COPS6-204ENST00000426712 SBF2Q86WG5 1849 aa12.88□□□□□ -0.35
COPS6-204ENST00000426712 USP19O94966 1318 aa12.88□□□□□ -0.35
COPS6-204ENST00000426712 NRKQ7Z2Y5 1582 aa12.87□□□□□ -0.35
COPS6-204ENST00000426712 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
COPS6-204ENST00000426712 EVA1CP58658 441 aa12.87□□□□□ -0.35
COPS6-204ENST00000426712 STRN4Q9NRL3 753 aa12.87□□□□□ -0.35
COPS6-204ENST00000426712 SSH2Q76I76 1423 aa12.87□□□□□ -0.35
COPS6-204ENST00000426712 TRIM37O94972 964 aa12.86□□□□□ -0.35
COPS6-204ENST00000426712 GCP02774 474 aa12.86□□□□□ -0.35
COPS6-204ENST00000426712 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
COPS6-204ENST00000426712 NLRP13Q86W25 1043 aa12.86□□□□□ -0.35
COPS6-204ENST00000426712 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
COPS6-204ENST00000426712 RREB1Q92766 1687 aa12.86□□□□□ -0.35
COPS6-204ENST00000426712 QRICH2Q9H0J4 1663 aa12.86□□□□□ -0.35
COPS6-204ENST00000426712 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
COPS6-204ENST00000426712 COL18A1P39060 1754 aa12.85□□□□□ -0.35
COPS6-204ENST00000426712 LARP1Q6PKG0 1096 aaKnown RBP12.85□□□□□ -0.35
COPS6-204ENST00000426712 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
COPS6-204ENST00000426712 PARD3Q8TEW0 1356 aa12.84□□□□□ -0.35
COPS6-204ENST00000426712 R3HDM1Q15032 1099 aaKnown RBP12.84□□□□□ -0.35
COPS6-204ENST00000426712 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
COPS6-204ENST00000426712 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
COPS6-204ENST00000426712 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
COPS6-204ENST00000426712 NUP188Q5SRE5 1749 aa12.83□□□□□ -0.36
COPS6-204ENST00000426712 APBA3O96018 575 aa12.83□□□□□ -0.36
COPS6-204ENST00000426712 PDE3BQ13370 1112 aa12.83□□□□□ -0.36
COPS6-204ENST00000426712 USP35Q9P2H5 1018 aa12.83□□□□□ -0.36
COPS6-204ENST00000426712 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
COPS6-204ENST00000426712 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
COPS6-204ENST00000426712 CABP1Q9NZU7 370 aa12.82□□□□□ -0.36
COPS6-204ENST00000426712 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
COPS6-204ENST00000426712 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
COPS6-204ENST00000426712 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
COPS6-204ENST00000426712 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
COPS6-204ENST00000426712 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
COPS6-204ENST00000426712 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
COPS6-204ENST00000426712 USP6P35125 1406 aa12.8□□□□□ -0.36
COPS6-204ENST00000426712 SLIT3O75094 1523 aa12.8□□□□□ -0.36
COPS6-204ENST00000426712 L3MBTL2Q969R5 705 aa12.8□□□□□ -0.36
COPS6-204ENST00000426712 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
COPS6-204ENST00000426712 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
COPS6-204ENST00000426712 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
COPS6-204ENST00000426712 WNK3Q9BYP7 1800 aa12.79□□□□□ -0.36
COPS6-204ENST00000426712 NLRP6P59044 892 aa12.79□□□□□ -0.36
COPS6-204ENST00000426712 CRB1P82279 1406 aa12.79□□□□□ -0.36
COPS6-204ENST00000426712 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
COPS6-204ENST00000426712 PLSCR1O15162 318 aa12.77□□□□□ -0.37
COPS6-204ENST00000426712 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
COPS6-204ENST00000426712 EVC2Q86UK5 1308 aa12.77□□□□□ -0.37
COPS6-204ENST00000426712 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
COPS6-204ENST00000426712 BCL9O00512 1426 aa12.75□□□□□ -0.37
COPS6-204ENST00000426712 LRRC37A3O60309 1634 aa12.75□□□□□ -0.37
COPS6-204ENST00000426712 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
COPS6-204ENST00000426712 TTC21BQ7Z4L5 1316 aa12.74□□□□□ -0.37
COPS6-204ENST00000426712 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms