RNA–Protein interactions for RNA: ENST00000425872.1

HMGN2P17-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 17, humanhuman

BASIC

Gene HMGN2P17, Length 743 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P17-201ENST00000425872 GLI3P10071 1580 aa15.6■□□□□ 0.09
HMGN2P17-201ENST00000425872 ATAD2Q6PL18 1390 aa15.6■□□□□ 0.09
HMGN2P17-201ENST00000425872 SAFB2Q14151 953 aaKnown RBP eCLIP15.59■□□□□ 0.09
HMGN2P17-201ENST00000425872 ATP7BP35670 1465 aa15.59■□□□□ 0.09
HMGN2P17-201ENST00000425872 QRICH2Q9H0J4 1663 aa15.58■□□□□ 0.08
HMGN2P17-201ENST00000425872 COL14A1Q05707 1796 aaKnown RBP15.58■□□□□ 0.08
HMGN2P17-201ENST00000425872 C11orf95C9JLR9 678 aaPredicted RBP15.58■□□□□ 0.08
HMGN2P17-201ENST00000425872 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
HMGN2P17-201ENST00000425872 PSME1Q06323 249 aa15.58■□□□□ 0.08
HMGN2P17-201ENST00000425872 KRT28Q7Z3Y7 464 aa15.58■□□□□ 0.08
HMGN2P17-201ENST00000425872 TRAK1Q9UPV9 953 aa15.58■□□□□ 0.08
HMGN2P17-201ENST00000425872 PHRF1Q9P1Y6 1649 aaKnown RBP15.57■□□□□ 0.08
HMGN2P17-201ENST00000425872 TESK2Q96S53 571 aa15.57■□□□□ 0.08
HMGN2P17-201ENST00000425872 MINK1Q8N4C8 1332 aaPredicted RBP15.55■□□□□ 0.08
HMGN2P17-201ENST00000425872 WASHC2AQ641Q2 1341 aa15.54■□□□□ 0.08
HMGN2P17-201ENST00000425872 CCDC7Q96M83 1385 aa15.52■□□□□ 0.08
HMGN2P17-201ENST00000425872 KIF7Q2M1P5 1343 aa15.52■□□□□ 0.08
HMGN2P17-201ENST00000425872 PRR36Q9H6K5 1346 aa15.52■□□□□ 0.08
HMGN2P17-201ENST00000425872 CENPJQ9HC77 1338 aaPredicted RBP15.52■□□□□ 0.08
HMGN2P17-201ENST00000425872 WASLO00401 505 aaPredicted RBP15.52■□□□□ 0.08
HMGN2P17-201ENST00000425872 HAP1P54257 671 aaPredicted RBP15.52■□□□□ 0.08
HMGN2P17-201ENST00000425872 DDX10Q13206 875 aaKnown RBP15.51■□□□□ 0.07
HMGN2P17-201ENST00000425872 UNC5CLQ8IV45 518 aa15.51■□□□□ 0.07
HMGN2P17-201ENST00000425872 TMF1P82094 1093 aa15.5■□□□□ 0.07
HMGN2P17-201ENST00000425872 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
HMGN2P17-201ENST00000425872 PMFBP1Q8TBY8 1022 aa15.5■□□□□ 0.07
HMGN2P17-201ENST00000425872 GJD4Q96KN9 370 aaPredicted RBP15.49■□□□□ 0.07
HMGN2P17-201ENST00000425872 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
HMGN2P17-201ENST00000425872 LMOD2Q6P5Q4 547 aa15.48■□□□□ 0.07
HMGN2P17-201ENST00000425872 SBNO2Q9Y2G9 1366 aa15.48■□□□□ 0.07
HMGN2P17-201ENST00000425872 NRKQ7Z2Y5 1582 aa15.47■□□□□ 0.07
HMGN2P17-201ENST00000425872 SRCAPQ6ZRS2 3230 aa15.46■□□□□ 0.07
HMGN2P17-201ENST00000425872 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
HMGN2P17-201ENST00000425872 CABLES1Q8TDN4 633 aa15.46■□□□□ 0.07
HMGN2P17-201ENST00000425872 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.07
HMGN2P17-201ENST00000425872 POLR3AO14802 1390 aaPredicted RBP15.46■□□□□ 0.07
HMGN2P17-201ENST00000425872 RGPD1P0DJD0 1748 aa15.46■□□□□ 0.06
HMGN2P17-201ENST00000425872 THSD7AQ9UPZ6 1657 aa15.45■□□□□ 0.06
HMGN2P17-201ENST00000425872 VPS72Q15906 364 aa15.45■□□□□ 0.06
HMGN2P17-201ENST00000425872 NGDNQ8NEJ9 315 aaKnown RBP15.45■□□□□ 0.06
HMGN2P17-201ENST00000425872 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
HMGN2P17-201ENST00000425872 CDCA8Q53HL2 280 aa15.43■□□□□ 0.06
HMGN2P17-201ENST00000425872 NUDT16Q96DE0 195 aaKnown RBP15.43■□□□□ 0.06
HMGN2P17-201ENST00000425872 CCDC125Q86Z20 511 aa15.42■□□□□ 0.06
HMGN2P17-201ENST00000425872 BLMP54132 1417 aaPredicted RBP15.42■□□□□ 0.06
HMGN2P17-201ENST00000425872 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
HMGN2P17-201ENST00000425872 EVC2Q86UK5 1308 aa15.41■□□□□ 0.06
HMGN2P17-201ENST00000425872 TNS1Q9HBL0 1735 aaKnown RBP15.4■□□□□ 0.06
HMGN2P17-201ENST00000425872 PLEKHG5O94827 1062 aa15.4■□□□□ 0.06
HMGN2P17-201ENST00000425872 CDK19Q9BWU1 502 aa15.4■□□□□ 0.06
HMGN2P17-201ENST00000425872 PPIP5K1Q6PFW1 1433 aa15.4■□□□□ 0.06
HMGN2P17-201ENST00000425872 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
HMGN2P17-201ENST00000425872 WNK3Q9BYP7 1800 aa15.39■□□□□ 0.05
HMGN2P17-201ENST00000425872 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
HMGN2P17-201ENST00000425872 PUS7Q96PZ0 661 aaKnown RBP15.39■□□□□ 0.05
HMGN2P17-201ENST00000425872 CCDC9Q9Y3X0 531 aaKnown RBP15.39■□□□□ 0.05
HMGN2P17-201ENST00000425872 CCDC61Q9Y6R9 512 aa15.39■□□□□ 0.05
HMGN2P17-201ENST00000425872 PIK3C2AO00443 1686 aa15.38■□□□□ 0.05
HMGN2P17-201ENST00000425872 MON2Q7Z3U7 1717 aa15.38■□□□□ 0.05
HMGN2P17-201ENST00000425872 FAM83GA6ND36 823 aa15.38■□□□□ 0.05
HMGN2P17-201ENST00000425872 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
HMGN2P17-201ENST00000425872 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
HMGN2P17-201ENST00000425872 PRDM11Q9NQV5 511 aa15.37■□□□□ 0.05
HMGN2P17-201ENST00000425872 BTG4Q9NY30 223 aa15.37■□□□□ 0.05
HMGN2P17-201ENST00000425872 ACEP12821 1306 aa15.37■□□□□ 0.05
HMGN2P17-201ENST00000425872 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
HMGN2P17-201ENST00000425872 ONECUT3O60422 494 aaPredicted RBP15.36■□□□□ 0.05
HMGN2P17-201ENST00000425872 PARP4Q9UKK3 1724 aaKnown RBP15.35■□□□□ 0.05
HMGN2P17-201ENST00000425872 SLIT3O75094 1523 aa15.35■□□□□ 0.05
HMGN2P17-201ENST00000425872 CABP2Q9NPB3 220 aa15.35■□□□□ 0.05
HMGN2P17-201ENST00000425872 USP54Q70EL1 1684 aa15.35■□□□□ 0.05
HMGN2P17-201ENST00000425872 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
HMGN2P17-201ENST00000425872 KRT27Q7Z3Y8 459 aa15.34■□□□□ 0.05
HMGN2P17-201ENST00000425872 USP19O94966 1318 aa15.34■□□□□ 0.05
HMGN2P17-201ENST00000425872 SPATA31A5Q5VU36 1347 aa15.34■□□□□ 0.05
HMGN2P17-201ENST00000425872 SPATA31A7Q8IWB4 1347 aa15.34■□□□□ 0.05
HMGN2P17-201ENST00000425872 CPDO75976 1380 aa15.34■□□□□ 0.05
HMGN2P17-201ENST00000425872 USP6P35125 1406 aa15.34■□□□□ 0.05
HMGN2P17-201ENST00000425872 PANK3Q9H999 370 aa15.33■□□□□ 0.04
HMGN2P17-201ENST00000425872 A0A0G2JS52 829 aa15.32■□□□□ 0.04
HMGN2P17-201ENST00000425872 MYT1Q01538 1121 aa15.32■□□□□ 0.04
HMGN2P17-201ENST00000425872 MIER1Q8N108 512 aa15.32■□□□□ 0.04
HMGN2P17-201ENST00000425872 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
HMGN2P17-201ENST00000425872 CAMTA1Q9Y6Y1 1673 aa15.32■□□□□ 0.04
HMGN2P17-201ENST00000425872 COL18A1P39060 1754 aa15.31■□□□□ 0.04
HMGN2P17-201ENST00000425872 SF3B2Q13435 895 aaKnown RBP15.31■□□□□ 0.04
HMGN2P17-201ENST00000425872 FAM98CQ17RN3 349 aaKnown RBP15.31■□□□□ 0.04
HMGN2P17-201ENST00000425872 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
HMGN2P17-201ENST00000425872 LRP5O75197 1615 aa15.31■□□□□ 0.04
HMGN2P17-201ENST00000425872 RGPD5Q99666 1765 aa15.31■□□□□ 0.04
HMGN2P17-201ENST00000425872 PER1O15534 1290 aaPredicted RBP15.3■□□□□ 0.04
HMGN2P17-201ENST00000425872 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
HMGN2P17-201ENST00000425872 ABCC6O95255 1503 aa15.29■□□□□ 0.04
HMGN2P17-201ENST00000425872 ABTB2Q8N961 1025 aa15.29■□□□□ 0.04
HMGN2P17-201ENST00000425872 TMC1Q8TDI8 760 aa15.29■□□□□ 0.04
HMGN2P17-201ENST00000425872 MYOM1P52179 1685 aa15.28■□□□□ 0.04
HMGN2P17-201ENST00000425872 RREB1Q92766 1687 aa15.28■□□□□ 0.04
HMGN2P17-201ENST00000425872 COL5A2P05997 1499 aaPredicted RBP15.28■□□□□ 0.04
HMGN2P17-201ENST00000425872 DISP2A7MBM2 1401 aa15.28■□□□□ 0.04
HMGN2P17-201ENST00000425872 SPATA31A1Q5TZJ5 1347 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms