RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 SEMA3FQ13275 785 aa8.63□□□□□ -1.03
LINC00400-201ENST00000425609 KCTD17Q8N5Z5 321 aa8.63□□□□□ -1.03
LINC00400-201ENST00000425609 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
LINC00400-201ENST00000425609 TFIP11Q9UBB9 837 aaKnown RBP8.63□□□□□ -1.03
LINC00400-201ENST00000425609 ACIN1Q9UKV3 1341 aaKnown RBP8.62□□□□□ -1.03
LINC00400-201ENST00000425609 ZBBXA8MT70 800 aa8.62□□□□□ -1.03
LINC00400-201ENST00000425609 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
LINC00400-201ENST00000425609 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
LINC00400-201ENST00000425609 MAFBQ9Y5Q3 323 aaPredicted RBP8.62□□□□□ -1.03
LINC00400-201ENST00000425609 LMOD1P29536 600 aaPredicted RBP8.61□□□□□ -1.03
LINC00400-201ENST00000425609 MMP16P51512 607 aa8.61□□□□□ -1.03
LINC00400-201ENST00000425609 THSD4Q6ZMP0 1018 aa8.61□□□□□ -1.03
LINC00400-201ENST00000425609 TBC1D9Q6ZT07 1266 aa8.61□□□□□ -1.03
LINC00400-201ENST00000425609 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
LINC00400-201ENST00000425609 SPSB2Q99619 263 aa8.6□□□□□ -1.03
LINC00400-201ENST00000425609 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
LINC00400-201ENST00000425609 USTQ9Y2C2 406 aa8.6□□□□□ -1.03
LINC00400-201ENST00000425609 EVA1BQ9NVM1 165 aa8.59□□□□□ -1.03
LINC00400-201ENST00000425609 ATP9BO43861 1147 aa8.58□□□□□ -1.04
LINC00400-201ENST00000425609 COPS2P61201 443 aa8.58□□□□□ -1.04
LINC00400-201ENST00000425609 NUDT12Q9BQG2 462 aa8.58□□□□□ -1.04
LINC00400-201ENST00000425609 OCSTAMPQ9BR26 566 aa8.58□□□□□ -1.04
LINC00400-201ENST00000425609 PIK3CDO00329 1044 aa8.57□□□□□ -1.04
LINC00400-201ENST00000425609 CTHP32929 405 aa8.57□□□□□ -1.04
LINC00400-201ENST00000425609 PDE4CQ08493 712 aa8.57□□□□□ -1.04
LINC00400-201ENST00000425609 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
LINC00400-201ENST00000425609 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
LINC00400-201ENST00000425609 TLL1O43897 1013 aa8.56□□□□□ -1.04
LINC00400-201ENST00000425609 ATG7O95352 703 aa8.56□□□□□ -1.04
LINC00400-201ENST00000425609 PDXDC2PQ6P474 469 aa8.56□□□□□ -1.04
LINC00400-201ENST00000425609 NFATC2IPQ8NCF5 419 aa8.56□□□□□ -1.04
LINC00400-201ENST00000425609 GPKOWQ92917 476 aaPredicted RBP eCLIP8.56□□□□□ -1.04
LINC00400-201ENST00000425609 GPSM3Q9Y4H4 160 aa8.56□□□□□ -1.04
LINC00400-201ENST00000425609 ZPR1O75312 459 aa8.55□□□□□ -1.04
LINC00400-201ENST00000425609 ADH1BP00325 375 aa8.55□□□□□ -1.04
LINC00400-201ENST00000425609 CSB-PGBD3P0DP91 1061 aa8.55□□□□□ -1.04
LINC00400-201ENST00000425609 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
LINC00400-201ENST00000425609 KANK4Q5T7N3 995 aaPredicted RBP8.54□□□□□ -1.04
LINC00400-201ENST00000425609 ARMC2Q8NEN0 867 aa8.54□□□□□ -1.04
LINC00400-201ENST00000425609 KCTD12Q96CX2 325 aaKnown RBP8.54□□□□□ -1.04
LINC00400-201ENST00000425609 CARNS1A5YM72 827 aa8.53□□□□□ -1.04
LINC00400-201ENST00000425609 TMEM88BA6NKF7 163 aa8.53□□□□□ -1.04
LINC00400-201ENST00000425609 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
LINC00400-201ENST00000425609 FAM174AQ8TBP5 190 aa8.53□□□□□ -1.04
LINC00400-201ENST00000425609 MTRQ99707 1265 aa8.53□□□□□ -1.04
LINC00400-201ENST00000425609 PTK2Q05397 1052 aa8.52□□□□□ -1.05
LINC00400-201ENST00000425609 NBPF14Q5TI25 921 aa8.52□□□□□ -1.05
LINC00400-201ENST00000425609 CCDC9Q9Y3X0 531 aaKnown RBP8.52□□□□□ -1.05
LINC00400-201ENST00000425609 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 BRD1O95696 1058 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 SH3BP5LQ7L8J4 393 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 UNC93B1Q9H1C4 597 aa8.51□□□□□ -1.05
LINC00400-201ENST00000425609 USP17L5A8MUK1 530 aa8.5□□□□□ -1.05
LINC00400-201ENST00000425609 SKIP12755 728 aa8.5□□□□□ -1.05
LINC00400-201ENST00000425609 ELOAQ14241 798 aaKnown RBP8.5□□□□□ -1.05
LINC00400-201ENST00000425609 PTCRAQ6ISU1 281 aaPredicted RBP8.5□□□□□ -1.05
LINC00400-201ENST00000425609 PHTF2Q8N3S3 785 aa8.5□□□□□ -1.05
LINC00400-201ENST00000425609 VRTNQ9H8Y1 702 aa8.5□□□□□ -1.05
LINC00400-201ENST00000425609 CEP126Q9P2H0 1117 aa8.5□□□□□ -1.05
LINC00400-201ENST00000425609 MYT1LQ9UL68 1186 aa8.5□□□□□ -1.05
LINC00400-201ENST00000425609 MCCD1P59942 119 aaPredicted RBP8.49□□□□□ -1.05
LINC00400-201ENST00000425609 KCNA1Q09470 495 aa8.49□□□□□ -1.05
LINC00400-201ENST00000425609 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
LINC00400-201ENST00000425609 ZNF592Q92610 1267 aa8.49□□□□□ -1.05
LINC00400-201ENST00000425609 ZNF516Q92618 1163 aa8.49□□□□□ -1.05
LINC00400-201ENST00000425609 CHIC2Q9UKJ5 165 aa8.49□□□□□ -1.05
LINC00400-201ENST00000425609 ZMIZ1Q9ULJ6 1067 aa8.49□□□□□ -1.05
LINC00400-201ENST00000425609 SH3RF1Q7Z6J0 888 aa8.48□□□□□ -1.05
LINC00400-201ENST00000425609 ARHGAP9Q9BRR9 750 aa8.48□□□□□ -1.05
LINC00400-201ENST00000425609 IL21Q9HBE4 155 aa8.48□□□□□ -1.05
LINC00400-201ENST00000425609 PCDHB9Q9Y5E1 797 aa8.48□□□□□ -1.05
LINC00400-201ENST00000425609 PATL2C9JE40 543 aaKnown RBP8.47□□□□□ -1.05
LINC00400-201ENST00000425609 SLC6A16Q9GZN6 736 aa8.47□□□□□ -1.05
LINC00400-201ENST00000425609 DEPDC4Q8N2C3 294 aa8.46□□□□□ -1.06
LINC00400-201ENST00000425609 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
LINC00400-201ENST00000425609 GZF1Q9H116 711 aaPredicted RBP8.46□□□□□ -1.06
LINC00400-201ENST00000425609 FAM196BA6NMK8 535 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 PTPN5P54829 565 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 NCOA4Q13772 614 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 SLFNL1Q499Z3 407 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 TMEM164Q5U3C3 297 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 RNF135Q8IUD6 432 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 PLPP7Q8NBV4 271 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 STK32AQ8WU08 396 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 PCDH10Q9P2E7 1040 aa8.45□□□□□ -1.06
LINC00400-201ENST00000425609 CRTC2Q53ET0 693 aaPredicted RBP8.44□□□□□ -1.06
LINC00400-201ENST00000425609 TRAF7Q6Q0C0 670 aa8.44□□□□□ -1.06
LINC00400-201ENST00000425609 NOVA2Q9UNW9 492 aaKnown RBP8.44□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L15C9J2P7 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L10C9JJH3 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L13C9JLJ4 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L11C9JVI0 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L21D6R901 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L18D6R9N7 530 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms