RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 COL14A1Q05707 1796 aaKnown RBP25.79■■□□□ 1.72
HDAC7-208ENST00000425451 CRYBG1Q9Y4K1 1723 aa25.78■■□□□ 1.72
HDAC7-208ENST00000425451 HRCP23327 699 aa25.77■■□□□ 1.72
HDAC7-208ENST00000425451 NGDNQ8NEJ9 315 aaKnown RBP25.77■■□□□ 1.72
HDAC7-208ENST00000425451 ARHGEF28Q8N1W1 1705 aaKnown RBP25.75■■□□□ 1.71
HDAC7-208ENST00000425451 ATP7BP35670 1465 aa25.74■■□□□ 1.71
HDAC7-208ENST00000425451 SPATA31A5Q5VU36 1347 aa25.74■■□□□ 1.71
HDAC7-208ENST00000425451 SPATA31A7Q8IWB4 1347 aa25.74■■□□□ 1.71
HDAC7-208ENST00000425451 A0A0G2JS52 829 aa25.74■■□□□ 1.71
HDAC7-208ENST00000425451 PAK3O75914 559 aaPredicted RBP25.74■■□□□ 1.71
HDAC7-208ENST00000425451 MYT1Q01538 1121 aa25.74■■□□□ 1.71
HDAC7-208ENST00000425451 NUDT16Q96DE0 195 aaKnown RBP25.74■■□□□ 1.71
HDAC7-208ENST00000425451 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
HDAC7-208ENST00000425451 ITSN1Q15811 1721 aa25.68■■□□□ 1.7
HDAC7-208ENST00000425451 FAM182BQ5T319 152 aa25.68■■□□□ 1.7
HDAC7-208ENST00000425451 CDK19Q9BWU1 502 aa25.68■■□□□ 1.7
HDAC7-208ENST00000425451 THSD7AQ9UPZ6 1657 aa25.68■■□□□ 1.7
HDAC7-208ENST00000425451 BAG6P46379 1132 aa25.67■■□□□ 1.7
HDAC7-208ENST00000425451 KIAA0232Q92628 1395 aa25.67■■□□□ 1.7
HDAC7-208ENST00000425451 POLR3AO14802 1390 aaPredicted RBP25.65■■□□□ 1.7
HDAC7-208ENST00000425451 CHRNA2Q15822 529 aa25.64■■□□□ 1.7
HDAC7-208ENST00000425451 SPATA31A1Q5TZJ5 1347 aa25.63■■□□□ 1.69
HDAC7-208ENST00000425451 PHRF1Q9P1Y6 1649 aaKnown RBP25.63■■□□□ 1.69
HDAC7-208ENST00000425451 NBPF8Q3BBV2 869 aa25.63■■□□□ 1.69
HDAC7-208ENST00000425451 NUTM2GQ5VZR2 741 aa25.63■■□□□ 1.69
HDAC7-208ENST00000425451 ACEP12821 1306 aa25.63■■□□□ 1.69
HDAC7-208ENST00000425451 TOPAZ1Q8N9V7 1692 aa25.62■■□□□ 1.69
HDAC7-208ENST00000425451 ZC3H6P61129 1189 aaKnown RBP25.62■■□□□ 1.69
HDAC7-208ENST00000425451 EN1Q05925 392 aaPredicted RBP25.62■■□□□ 1.69
HDAC7-208ENST00000425451 CCDC61Q9Y6R9 512 aa25.62■■□□□ 1.69
HDAC7-208ENST00000425451 PLEKHG3A1L390 1219 aa25.61■■□□□ 1.69
HDAC7-208ENST00000425451 PSDA5PKW4 1024 aaPredicted RBP25.61■■□□□ 1.69
HDAC7-208ENST00000425451 LRP5O75197 1615 aa25.61■■□□□ 1.69
HDAC7-208ENST00000425451 RGPD1P0DJD0 1748 aa25.6■■□□□ 1.69
HDAC7-208ENST00000425451 NBPF1Q3BBV0 1214 aa25.6■■□□□ 1.69
HDAC7-208ENST00000425451 KIAA1210Q9ULL0 1709 aa25.6■■□□□ 1.69
HDAC7-208ENST00000425451 DISP2A7MBM2 1401 aa25.58■■□□□ 1.69
HDAC7-208ENST00000425451 STRN4Q9NRL3 753 aa25.58■■□□□ 1.69
HDAC7-208ENST00000425451 TNS1Q9HBL0 1735 aaKnown RBP25.57■■□□□ 1.68
HDAC7-208ENST00000425451 NRKQ7Z2Y5 1582 aa25.53■■□□□ 1.68
HDAC7-208ENST00000425451 CAMTA1Q9Y6Y1 1673 aa25.53■■□□□ 1.68
HDAC7-208ENST00000425451 ABTB2Q8N961 1025 aa25.53■■□□□ 1.68
HDAC7-208ENST00000425451 USP19O94966 1318 aa25.53■■□□□ 1.68
HDAC7-208ENST00000425451 SSH2Q76I76 1423 aa25.53■■□□□ 1.68
HDAC7-208ENST00000425451 EZH2Q15910 746 aaKnown RBP25.52■■□□□ 1.68
HDAC7-208ENST00000425451 FAM196AQ6ZSG2 479 aa25.52■■□□□ 1.68
HDAC7-208ENST00000425451 BARGINQ6ZT62 677 aa25.52■■□□□ 1.68
HDAC7-208ENST00000425451 USP35Q9P2H5 1018 aa25.52■■□□□ 1.68
HDAC7-208ENST00000425451 TRIM37O94972 964 aa25.51■■□□□ 1.67
HDAC7-208ENST00000425451 CAMKK2Q96RR4 588 aa25.51■■□□□ 1.67
HDAC7-208ENST00000425451 CPDO75976 1380 aa25.51■■□□□ 1.67
HDAC7-208ENST00000425451 EVA1CP58658 441 aa25.5■■□□□ 1.67
HDAC7-208ENST00000425451 R3HDM1Q15032 1099 aaKnown RBP25.5■■□□□ 1.67
HDAC7-208ENST00000425451 LARP1Q6PKG0 1096 aaKnown RBP25.5■■□□□ 1.67
HDAC7-208ENST00000425451 LMO7Q8WWI1 1683 aa25.5■■□□□ 1.67
HDAC7-208ENST00000425451 PPIP5K1Q6PFW1 1433 aa25.49■■□□□ 1.67
HDAC7-208ENST00000425451 CENPJQ9HC77 1338 aaPredicted RBP25.48■■□□□ 1.67
HDAC7-208ENST00000425451 SRPK2P78362 688 aaKnown RBP25.48■■□□□ 1.67
HDAC7-208ENST00000425451 CABP2Q9NPB3 220 aa25.48■■□□□ 1.67
HDAC7-208ENST00000425451 GCP02774 474 aa25.47■■□□□ 1.67
HDAC7-208ENST00000425451 NLRP13Q86W25 1043 aa25.46■■□□□ 1.67
HDAC7-208ENST00000425451 TCP11L2Q8N4U5 519 aa25.45■■□□□ 1.66
HDAC7-208ENST00000425451 APBA3O96018 575 aa25.44■■□□□ 1.66
HDAC7-208ENST00000425451 PDE3BQ13370 1112 aa25.44■■□□□ 1.66
HDAC7-208ENST00000425451 BRD4O60885 1362 aaPredicted RBP25.43■■□□□ 1.66
HDAC7-208ENST00000425451 CABP1Q9NZU7 370 aa25.42■■□□□ 1.66
HDAC7-208ENST00000425451 COL5A2P05997 1499 aaPredicted RBP25.41■■□□□ 1.66
HDAC7-208ENST00000425451 THRAP3Q9Y2W1 955 aaKnown RBP25.41■■□□□ 1.66
HDAC7-208ENST00000425451 PARD3Q8TEW0 1356 aa25.41■■□□□ 1.66
HDAC7-208ENST00000425451 QRICH2Q9H0J4 1663 aa25.4■■□□□ 1.66
HDAC7-208ENST00000425451 USP6P35125 1406 aa25.39■■□□□ 1.66
HDAC7-208ENST00000425451 L3MBTL2Q969R5 705 aa25.38■■□□□ 1.65
HDAC7-208ENST00000425451 RREB1Q92766 1687 aa25.36■■□□□ 1.65
HDAC7-208ENST00000425451 NLRP6P59044 892 aa25.36■■□□□ 1.65
HDAC7-208ENST00000425451 PARP4Q9UKK3 1724 aaKnown RBP25.36■■□□□ 1.65
HDAC7-208ENST00000425451 SLIT3O75094 1523 aa25.36■■□□□ 1.65
HDAC7-208ENST00000425451 AATKQ6ZMQ8 1374 aa25.35■■□□□ 1.65
HDAC7-208ENST00000425451 CRB1P82279 1406 aa25.35■■□□□ 1.65
HDAC7-208ENST00000425451 NUP188Q5SRE5 1749 aa25.33■■□□□ 1.65
HDAC7-208ENST00000425451 ZBTB7CA1YPR0 619 aa25.32■■□□□ 1.64
HDAC7-208ENST00000425451 PIK3C2AO00443 1686 aa25.31■■□□□ 1.64
HDAC7-208ENST00000425451 COL18A1P39060 1754 aa25.31■■□□□ 1.64
HDAC7-208ENST00000425451 PEAK1Q9H792 1746 aa25.3■■□□□ 1.64
HDAC7-208ENST00000425451 SIN3AQ96ST3 1273 aa25.3■■□□□ 1.64
HDAC7-208ENST00000425451 AXIN2Q9Y2T1 843 aa25.3■■□□□ 1.64
HDAC7-208ENST00000425451 EVC2Q86UK5 1308 aa25.3■■□□□ 1.64
HDAC7-208ENST00000425451 TRPM1Q7Z4N2 1603 aa25.3■■□□□ 1.64
HDAC7-208ENST00000425451 C11orf95C9JLR9 678 aaPredicted RBP25.27■■□□□ 1.64
HDAC7-208ENST00000425451 NBPF14Q5TI25 921 aa25.27■■□□□ 1.64
HDAC7-208ENST00000425451 LRRC37A3O60309 1634 aa25.26■■□□□ 1.63
HDAC7-208ENST00000425451 TTC21BQ7Z4L5 1316 aa25.26■■□□□ 1.63
HDAC7-208ENST00000425451 OVOS2A0A0G2JMS6 1433 aa25.26■■□□□ 1.63
HDAC7-208ENST00000425451 OVOS2A0A0J9YW53 1432 aa25.26■■□□□ 1.63
HDAC7-208ENST00000425451 OVOS2Q6IE36 1432 aa25.26■■□□□ 1.63
HDAC7-208ENST00000425451 TOM1L2Q6ZVM7 507 aa25.25■■□□□ 1.63
HDAC7-208ENST00000425451 ARHGEF25Q86VW2 580 aa25.25■■□□□ 1.63
HDAC7-208ENST00000425451 ZNF692Q9BU19 519 aaPredicted RBP25.25■■□□□ 1.63
HDAC7-208ENST00000425451 CPSF1Q10570 1443 aaKnown RBP25.24■■□□□ 1.63
HDAC7-208ENST00000425451 WDR17Q8IZU2 1322 aa25.24■■□□□ 1.63
HDAC7-208ENST00000425451 DDB1Q16531 1140 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms