RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 ZNF598Q86UK7 904 aaKnown RBP8.1□□□□□ -1.11
HDAC9-209ENST00000425071 GJD4Q96KN9 370 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-209ENST00000425071 FKBPLQ9UIM3 349 aa8.1□□□□□ -1.11
HDAC9-209ENST00000425071 NDUFB9Q9Y6M9 179 aa8.1□□□□□ -1.11
HDAC9-209ENST00000425071 PDXDC2PQ6P474 469 aa8.09□□□□□ -1.11
HDAC9-209ENST00000425071 TRIM34Q9BYJ4 488 aa8.09□□□□□ -1.11
HDAC9-209ENST00000425071 HMX1Q9NP08 348 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-209ENST00000425071 GPSM3Q9Y4H4 160 aa8.09□□□□□ -1.11
HDAC9-209ENST00000425071 EMID1Q96A84 441 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-209ENST00000425071 ERICH6Q7L0X2 663 aa8.07□□□□□ -1.12
HDAC9-209ENST00000425071 ZNF511Q8NB15 262 aa8.07□□□□□ -1.12
HDAC9-209ENST00000425071 BPHLQ86WA6 291 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-209ENST00000425071 BAP1Q92560 729 aa8.06□□□□□ -1.12
HDAC9-209ENST00000425071 WNT7AO00755 349 aa8.05□□□□□ -1.12
HDAC9-209ENST00000425071 RAD21O60216 631 aa8.05□□□□□ -1.12
HDAC9-209ENST00000425071 SH3BP2P78314 561 aa8.05□□□□□ -1.12
HDAC9-209ENST00000425071 ZNF697Q5TEC3 545 aa8.05□□□□□ -1.12
HDAC9-209ENST00000425071 EPS8L1Q8TE68 723 aa8.05□□□□□ -1.12
HDAC9-209ENST00000425071 UBTFP17480 764 aaKnown RBP8.04□□□□□ -1.12
HDAC9-209ENST00000425071 VARSP26640 1264 aaKnown RBP8.04□□□□□ -1.12
HDAC9-209ENST00000425071 PTK2Q05397 1052 aa8.04□□□□□ -1.12
HDAC9-209ENST00000425071 WWC1Q8IX03 1113 aa8.04□□□□□ -1.12
HDAC9-209ENST00000425071 ZNF592Q92610 1267 aa8.04□□□□□ -1.12
HDAC9-209ENST00000425071 SH3BP5LQ7L8J4 393 aa8.03□□□□□ -1.12
HDAC9-209ENST00000425071 SKOR1P84550 965 aa8.02□□□□□ -1.13
HDAC9-209ENST00000425071 PRR20EP86478 221 aa8.02□□□□□ -1.13
HDAC9-209ENST00000425071 PRR20CP86479 221 aa8.02□□□□□ -1.13
HDAC9-209ENST00000425071 PRR20DP86480 221 aa8.02□□□□□ -1.13
HDAC9-209ENST00000425071 PRR20BP86481 221 aa8.02□□□□□ -1.13
HDAC9-209ENST00000425071 PRR20AP86496 221 aa8.02□□□□□ -1.13
HDAC9-209ENST00000425071 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.13
HDAC9-209ENST00000425071 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
HDAC9-209ENST00000425071 MPNDQ8N594 471 aa8.02□□□□□ -1.13
HDAC9-209ENST00000425071 IRX2Q9BZI1 471 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-209ENST00000425071 MCCD1P59942 119 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-209ENST00000425071 AGERQ15109 404 aa8.01□□□□□ -1.13
HDAC9-209ENST00000425071 WASHC4Q2M389 1173 aa8.01□□□□□ -1.13
HDAC9-209ENST00000425071 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
HDAC9-209ENST00000425071 EHBP1Q8NDI1 1231 aa8.01□□□□□ -1.13
HDAC9-209ENST00000425071 ARHGAP9Q9BRR9 750 aa8.01□□□□□ -1.13
HDAC9-209ENST00000425071 TBC1D2BQ9UPU7 963 aa8.01□□□□□ -1.13
HDAC9-209ENST00000425071 COG6Q9Y2V7 657 aa8.01□□□□□ -1.13
HDAC9-209ENST00000425071 ZNF330Q9Y3S2 320 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-209ENST00000425071 ZBBXA8MT70 800 aa8□□□□□ -1.13
HDAC9-209ENST00000425071 GDF9O60383 454 aa8□□□□□ -1.13
HDAC9-209ENST00000425071 ZBTB33Q86T24 672 aa8□□□□□ -1.13
HDAC9-209ENST00000425071 FAM174AQ8TBP5 190 aa8□□□□□ -1.13
HDAC9-209ENST00000425071 A6NJR5 290 aa7.99□□□□□ -1.13
HDAC9-209ENST00000425071 LAPTM4AQ15012 233 aa7.99□□□□□ -1.13
HDAC9-209ENST00000425071 FOXJ1Q92949 421 aa7.99□□□□□ -1.13
HDAC9-209ENST00000425071 GDPD2Q9HCC8 539 aa7.99□□□□□ -1.13
HDAC9-209ENST00000425071 PKD2L1Q9P0L9 805 aa7.99□□□□□ -1.13
HDAC9-209ENST00000425071 CDV3Q9UKY7 258 aaKnown RBP7.99□□□□□ -1.13
HDAC9-209ENST00000425071 NR1H3Q13133 447 aa7.98□□□□□ -1.13
HDAC9-209ENST00000425071 TRMT44Q8IYL2 757 aaKnown RBP7.98□□□□□ -1.13
HDAC9-209ENST00000425071 C1QTNF2Q9BXJ5 285 aa7.98□□□□□ -1.13
HDAC9-209ENST00000425071 GPR37L1O60883 481 aa7.97□□□□□ -1.13
HDAC9-209ENST00000425071 ABL2P42684 1182 aa7.97□□□□□ -1.13
HDAC9-209ENST00000425071 FOXC1Q12948 553 aa7.97□□□□□ -1.13
HDAC9-209ENST00000425071 SNIP1Q8TAD8 396 aaKnown RBP7.97□□□□□ -1.13
HDAC9-209ENST00000425071 MRGPRX2Q96LB1 330 aa7.97□□□□□ -1.13
HDAC9-209ENST00000425071 MAGEB6P1A0A0J9YX57 407 aa7.96□□□□□ -1.14
HDAC9-209ENST00000425071 SIAH2O43255 324 aa7.96□□□□□ -1.14
HDAC9-209ENST00000425071 SOX11P35716 441 aa7.96□□□□□ -1.14
HDAC9-209ENST00000425071 CDK15Q96Q40 435 aa7.96□□□□□ -1.14
HDAC9-209ENST00000425071 MAP4K5Q9Y4K4 846 aa7.96□□□□□ -1.14
HDAC9-209ENST00000425071 FBXO45P0C2W1 286 aa7.95□□□□□ -1.14
HDAC9-209ENST00000425071 EIF4G2P78344 907 aaKnown RBP eCLIP7.95□□□□□ -1.14
HDAC9-209ENST00000425071 IRF5Q13568 498 aa7.95□□□□□ -1.14
HDAC9-209ENST00000425071 ERFEQ4G0M1 354 aa7.95□□□□□ -1.14
HDAC9-209ENST00000425071 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
HDAC9-209ENST00000425071 CYP4X1Q8N118 509 aa7.95□□□□□ -1.14
HDAC9-209ENST00000425071 ADAM32Q8TC27 787 aa7.95□□□□□ -1.14
HDAC9-209ENST00000425071 PDZRN3Q9UPQ7 1066 aa7.95□□□□□ -1.14
HDAC9-209ENST00000425071 TRIM67Q6ZTA4 783 aa7.94□□□□□ -1.14
HDAC9-209ENST00000425071 CCDC125Q86Z20 511 aa7.94□□□□□ -1.14
HDAC9-209ENST00000425071 SLC10A4Q96EP9 437 aa7.94□□□□□ -1.14
HDAC9-209ENST00000425071 POM121Q96HA1 1249 aa7.94□□□□□ -1.14
HDAC9-209ENST00000425071 OCSTAMPQ9BR26 566 aa7.94□□□□□ -1.14
HDAC9-209ENST00000425071 TOR4AQ9NXH8 423 aa7.94□□□□□ -1.14
HDAC9-209ENST00000425071 TTC24A2A3L6 582 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-209ENST00000425071 NRG2O14511 850 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-209ENST00000425071 PROSER2Q86WR7 435 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-209ENST00000425071 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
HDAC9-209ENST00000425071 CARD14Q9BXL6 1004 aa7.93□□□□□ -1.14
HDAC9-209ENST00000425071 ZMYND15Q9H091 742 aa7.93□□□□□ -1.14
HDAC9-209ENST00000425071 NBPF20Q3BBV1 942 aa7.92□□□□□ -1.14
HDAC9-209ENST00000425071 DZIP3Q86Y13 1208 aaKnown RBP7.92□□□□□ -1.14
HDAC9-209ENST00000425071 FNBP4Q8N3X1 1017 aaPredicted RBP7.92□□□□□ -1.14
HDAC9-209ENST00000425071 CLUAP1Q96AJ1 413 aa7.92□□□□□ -1.14
HDAC9-209ENST00000425071 TNFRSF10AO00220 468 aa7.91□□□□□ -1.14
HDAC9-209ENST00000425071 GFRA3O60609 400 aa7.91□□□□□ -1.14
HDAC9-209ENST00000425071 NR5A1Q13285 461 aa7.91□□□□□ -1.14
HDAC9-209ENST00000425071 SEPT12Q8IYM1 358 aa7.91□□□□□ -1.14
HDAC9-209ENST00000425071 ADH1CP00326 375 aa7.9□□□□□ -1.14
HDAC9-209ENST00000425071 VASH1Q7L8A9 365 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-209ENST00000425071 C14orf37Q86TY3 774 aa7.9□□□□□ -1.14
HDAC9-209ENST00000425071 WASF2Q9Y6W5 498 aa7.9□□□□□ -1.14
HDAC9-209ENST00000425071 DGAT1O75907 488 aa7.89□□□□□ -1.15
HDAC9-209ENST00000425071 ALDH1A1P00352 501 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms