RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 ATAD2Q6PL18 1390 aa23.67■■□□□ 1.38
SHANK2-207ENST00000425049 ACEP12821 1306 aa23.67■■□□□ 1.38
SHANK2-207ENST00000425049 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
SHANK2-207ENST00000425049 CCDC9Q9Y3X0 531 aaKnown RBP23.66■■□□□ 1.38
SHANK2-207ENST00000425049 PPIP5K1Q6PFW1 1433 aa23.66■■□□□ 1.38
SHANK2-207ENST00000425049 PLCH1Q4KWH8 1693 aa23.65■■□□□ 1.38
SHANK2-207ENST00000425049 RALGAPBQ86X10 1494 aa23.65■■□□□ 1.38
SHANK2-207ENST00000425049 PLEKHG3A1L390 1219 aa23.65■■□□□ 1.38
SHANK2-207ENST00000425049 CABP2Q9NPB3 220 aa23.65■■□□□ 1.38
SHANK2-207ENST00000425049 EVC2Q86UK5 1308 aa23.64■■□□□ 1.38
SHANK2-207ENST00000425049 NBPF8Q3BBV2 869 aa23.64■■□□□ 1.37
SHANK2-207ENST00000425049 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.37
SHANK2-207ENST00000425049 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
SHANK2-207ENST00000425049 VPS72Q15906 364 aa23.62■■□□□ 1.37
SHANK2-207ENST00000425049 PRDM11Q9NQV5 511 aa23.61■■□□□ 1.37
SHANK2-207ENST00000425049 GLI3P10071 1580 aa23.6■■□□□ 1.37
SHANK2-207ENST00000425049 NUTM2GQ5VZR2 741 aa23.59■■□□□ 1.37
SHANK2-207ENST00000425049 BTG4Q9NY30 223 aa23.59■■□□□ 1.37
SHANK2-207ENST00000425049 COL14A1Q05707 1796 aaKnown RBP23.59■■□□□ 1.37
SHANK2-207ENST00000425049 ABTB2Q8N961 1025 aa23.58■■□□□ 1.37
SHANK2-207ENST00000425049 CARD11Q9BXL7 1154 aa23.58■■□□□ 1.37
SHANK2-207ENST00000425049 CRYBG1Q9Y4K1 1723 aa23.56■■□□□ 1.36
SHANK2-207ENST00000425049 A0A0G2JS52 829 aa23.56■■□□□ 1.36
SHANK2-207ENST00000425049 MYT1Q01538 1121 aa23.56■■□□□ 1.36
SHANK2-207ENST00000425049 CABP1Q9NZU7 370 aa23.56■■□□□ 1.36
SHANK2-207ENST00000425049 BRD4O60885 1362 aaPredicted RBP23.55■■□□□ 1.36
SHANK2-207ENST00000425049 KIAA0232Q92628 1395 aa23.54■■□□□ 1.36
SHANK2-207ENST00000425049 PHRF1Q9P1Y6 1649 aaKnown RBP23.54■■□□□ 1.36
SHANK2-207ENST00000425049 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
SHANK2-207ENST00000425049 SEPT12Q8IYM1 358 aa23.53■■□□□ 1.36
SHANK2-207ENST00000425049 ZC3H6P61129 1189 aaKnown RBP23.52■■□□□ 1.36
SHANK2-207ENST00000425049 NLRP13Q86W25 1043 aa23.52■■□□□ 1.36
SHANK2-207ENST00000425049 USP6P35125 1406 aa23.51■■□□□ 1.35
SHANK2-207ENST00000425049 CHRNA2Q15822 529 aa23.5■■□□□ 1.35
SHANK2-207ENST00000425049 SBNO2Q9Y2G9 1366 aa23.49■■□□□ 1.35
SHANK2-207ENST00000425049 NRKQ7Z2Y5 1582 aa23.48■■□□□ 1.35
SHANK2-207ENST00000425049 FAM98CQ17RN3 349 aaKnown RBP23.48■■□□□ 1.35
SHANK2-207ENST00000425049 CCDC125Q86Z20 511 aa23.48■■□□□ 1.35
SHANK2-207ENST00000425049 USP19O94966 1318 aa23.48■■□□□ 1.35
SHANK2-207ENST00000425049 STRN4Q9NRL3 753 aa23.47■■□□□ 1.35
SHANK2-207ENST00000425049 ONECUT3O60422 494 aaPredicted RBP23.46■■□□□ 1.35
SHANK2-207ENST00000425049 SPATA31A5Q5VU36 1347 aa23.46■■□□□ 1.35
SHANK2-207ENST00000425049 SPATA31A7Q8IWB4 1347 aa23.46■■□□□ 1.35
SHANK2-207ENST00000425049 EVA1CP58658 441 aa23.45■■□□□ 1.34
SHANK2-207ENST00000425049 NLRP6P59044 892 aa23.45■■□□□ 1.34
SHANK2-207ENST00000425049 KRT27Q7Z3Y8 459 aa23.45■■□□□ 1.34
SHANK2-207ENST00000425049 ZNF692Q9BU19 519 aaPredicted RBP23.45■■□□□ 1.34
SHANK2-207ENST00000425049 CPDO75976 1380 aa23.44■■□□□ 1.34
SHANK2-207ENST00000425049 EP400Q96L91 3159 aa23.44■■□□□ 1.34
SHANK2-207ENST00000425049 GCP02774 474 aa23.43■■□□□ 1.34
SHANK2-207ENST00000425049 SF3B2Q13435 895 aaKnown RBP23.42■■□□□ 1.34
SHANK2-207ENST00000425049 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
SHANK2-207ENST00000425049 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
SHANK2-207ENST00000425049 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
SHANK2-207ENST00000425049 SSH2Q76I76 1423 aa23.4■■□□□ 1.34
SHANK2-207ENST00000425049 KTN1Q86UP2 1357 aaKnown RBP23.4■■□□□ 1.34
SHANK2-207ENST00000425049 SPATA31A1Q5TZJ5 1347 aa23.39■■□□□ 1.34
SHANK2-207ENST00000425049 TTC21BQ7Z4L5 1316 aa23.39■■□□□ 1.34
SHANK2-207ENST00000425049 TTC21AQ8NDW8 1320 aa23.39■■□□□ 1.34
SHANK2-207ENST00000425049 TMC1Q8TDI8 760 aa23.39■■□□□ 1.33
SHANK2-207ENST00000425049 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
SHANK2-207ENST00000425049 AKAP12Q02952 1782 aa23.37■■□□□ 1.33
SHANK2-207ENST00000425049 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
SHANK2-207ENST00000425049 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
SHANK2-207ENST00000425049 SLIT3O75094 1523 aa23.37■■□□□ 1.33
SHANK2-207ENST00000425049 PCGF6Q9BYE7 350 aa23.36■■□□□ 1.33
SHANK2-207ENST00000425049 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
SHANK2-207ENST00000425049 SLC24A1O60721 1099 aa23.35■■□□□ 1.33
SHANK2-207ENST00000425049 HDGFL2Q7Z4V5 671 aaPredicted RBP23.35■■□□□ 1.33
SHANK2-207ENST00000425049 LMO7Q8WWI1 1683 aa23.35■■□□□ 1.33
SHANK2-207ENST00000425049 KCNH5Q8NCM2 988 aa23.34■■□□□ 1.33
SHANK2-207ENST00000425049 THSD7AQ9UPZ6 1657 aa23.34■■□□□ 1.33
SHANK2-207ENST00000425049 LARP1Q6PKG0 1096 aaKnown RBP23.33■■□□□ 1.33
SHANK2-207ENST00000425049 COL5A2P05997 1499 aaPredicted RBP23.32■■□□□ 1.32
SHANK2-207ENST00000425049 AATKQ6ZMQ8 1374 aa23.32■■□□□ 1.32
SHANK2-207ENST00000425049 ST20-MTHFSA0A0A6YYL1 179 aa23.32■■□□□ 1.32
SHANK2-207ENST00000425049 SOX12O15370 315 aa23.32■■□□□ 1.32
SHANK2-207ENST00000425049 TCP11L2Q8N4U5 519 aa23.32■■□□□ 1.32
SHANK2-207ENST00000425049 TERF2IPQ9NYB0 399 aa23.32■■□□□ 1.32
SHANK2-207ENST00000425049 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
SHANK2-207ENST00000425049 MON2Q7Z3U7 1717 aa23.31■■□□□ 1.32
SHANK2-207ENST00000425049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.31■■□□□ 1.32
SHANK2-207ENST00000425049 PUS7Q96PZ0 661 aaKnown RBP23.31■■□□□ 1.32
SHANK2-207ENST00000425049 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
SHANK2-207ENST00000425049 BARGINQ6ZT62 677 aa23.3■■□□□ 1.32
SHANK2-207ENST00000425049 SLC12A5Q9H2X9 1139 aa23.29■■□□□ 1.32
SHANK2-207ENST00000425049 THRAP3Q9Y2W1 955 aaKnown RBP23.29■■□□□ 1.32
SHANK2-207ENST00000425049 USP47Q96K76 1375 aa23.28■■□□□ 1.32
SHANK2-207ENST00000425049 NINLQ9Y2I6 1382 aa23.28■■□□□ 1.32
SHANK2-207ENST00000425049 TIMELESSQ9UNS1 1208 aa23.28■■□□□ 1.32
SHANK2-207ENST00000425049 CRB1P82279 1406 aa23.27■■□□□ 1.32
SHANK2-207ENST00000425049 BAG6P46379 1132 aa23.27■■□□□ 1.32
SHANK2-207ENST00000425049 PDE3BQ13370 1112 aa23.27■■□□□ 1.32
SHANK2-207ENST00000425049 DEFB132Q7Z7B7 95 aa23.27■■□□□ 1.32
SHANK2-207ENST00000425049 TESK2Q96S53 571 aa23.27■■□□□ 1.32
SHANK2-207ENST00000425049 EDC4Q6P2E9 1401 aaKnown RBP23.26■■□□□ 1.31
SHANK2-207ENST00000425049 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
SHANK2-207ENST00000425049 FAM182BQ5T319 152 aa23.26■■□□□ 1.31
SHANK2-207ENST00000425049 TOM1L2Q6ZVM7 507 aa23.25■■□□□ 1.31
SHANK2-207ENST00000425049 ARHGEF25Q86VW2 580 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms