RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 PRR36Q9H6K5 1346 aa23.75■■□□□ 1.39
PUDP-203ENST00000424830 PSDA5PKW4 1024 aaPredicted RBP23.75■■□□□ 1.39
PUDP-203ENST00000424830 WASLO00401 505 aaPredicted RBP23.75■■□□□ 1.39
PUDP-203ENST00000424830 NGDNQ8NEJ9 315 aaKnown RBP23.75■■□□□ 1.39
PUDP-203ENST00000424830 SPATA31A5Q5VU36 1347 aa23.74■■□□□ 1.39
PUDP-203ENST00000424830 SPATA31A7Q8IWB4 1347 aa23.74■■□□□ 1.39
PUDP-203ENST00000424830 CRYBG1Q9Y4K1 1723 aa23.74■■□□□ 1.39
PUDP-203ENST00000424830 PAK3O75914 559 aaPredicted RBP23.74■■□□□ 1.39
PUDP-203ENST00000424830 PRDM11Q9NQV5 511 aa23.73■■□□□ 1.39
PUDP-203ENST00000424830 ITSN1Q15811 1721 aa23.73■■□□□ 1.39
PUDP-203ENST00000424830 THSD7AQ9UPZ6 1657 aa23.72■■□□□ 1.39
PUDP-203ENST00000424830 RAB3GAP2Q9H2M9 1393 aa23.72■■□□□ 1.39
PUDP-203ENST00000424830 HRCP23327 699 aa23.71■■□□□ 1.39
PUDP-203ENST00000424830 EN1Q05925 392 aaPredicted RBP23.71■■□□□ 1.39
PUDP-203ENST00000424830 KDM2AQ9Y2K7 1162 aa23.71■■□□□ 1.39
PUDP-203ENST00000424830 DCAF11Q8TEB1 546 aa23.7■■□□□ 1.38
PUDP-203ENST00000424830 FAM182BQ5T319 152 aa23.68■■□□□ 1.38
PUDP-203ENST00000424830 STAC3Q96MF2 364 aa23.68■■□□□ 1.38
PUDP-203ENST00000424830 TNS1Q9HBL0 1735 aaKnown RBP23.68■■□□□ 1.38
PUDP-203ENST00000424830 DISP2A7MBM2 1401 aa23.68■■□□□ 1.38
PUDP-203ENST00000424830 ARHGEF28Q8N1W1 1705 aaKnown RBP23.67■■□□□ 1.38
PUDP-203ENST00000424830 ATP7BP35670 1465 aa23.66■■□□□ 1.38
PUDP-203ENST00000424830 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
PUDP-203ENST00000424830 PHRF1Q9P1Y6 1649 aaKnown RBP23.65■■□□□ 1.38
PUDP-203ENST00000424830 SPATA31A1Q5TZJ5 1347 aa23.64■■□□□ 1.37
PUDP-203ENST00000424830 NUDT16Q96DE0 195 aaKnown RBP23.63■■□□□ 1.37
PUDP-203ENST00000424830 R3HDM1Q15032 1099 aaKnown RBP23.62■■□□□ 1.37
PUDP-203ENST00000424830 STRN4Q9NRL3 753 aa23.62■■□□□ 1.37
PUDP-203ENST00000424830 FAM196AQ6ZSG2 479 aa23.61■■□□□ 1.37
PUDP-203ENST00000424830 CHRNA2Q15822 529 aa23.6■■□□□ 1.37
PUDP-203ENST00000424830 EZH2Q15910 746 aaKnown RBP23.59■■□□□ 1.37
PUDP-203ENST00000424830 ZC3H6P61129 1189 aaKnown RBP23.59■■□□□ 1.37
PUDP-203ENST00000424830 TRIM37O94972 964 aa23.58■■□□□ 1.36
PUDP-203ENST00000424830 PARD3Q8TEW0 1356 aa23.57■■□□□ 1.36
PUDP-203ENST00000424830 TOPAZ1Q8N9V7 1692 aa23.57■■□□□ 1.36
PUDP-203ENST00000424830 EVA1CP58658 441 aa23.57■■□□□ 1.36
PUDP-203ENST00000424830 NUTM2GQ5VZR2 741 aa23.57■■□□□ 1.36
PUDP-203ENST00000424830 CDK19Q9BWU1 502 aa23.57■■□□□ 1.36
PUDP-203ENST00000424830 USP35Q9P2H5 1018 aa23.57■■□□□ 1.36
PUDP-203ENST00000424830 POLR3AO14802 1390 aaPredicted RBP23.56■■□□□ 1.36
PUDP-203ENST00000424830 SSH2Q76I76 1423 aa23.55■■□□□ 1.36
PUDP-203ENST00000424830 APBA3O96018 575 aa23.55■■□□□ 1.36
PUDP-203ENST00000424830 CAMKK2Q96RR4 588 aa23.55■■□□□ 1.36
PUDP-203ENST00000424830 NRKQ7Z2Y5 1582 aa23.54■■□□□ 1.36
PUDP-203ENST00000424830 ACEP12821 1306 aa23.54■■□□□ 1.36
PUDP-203ENST00000424830 PDE3BQ13370 1112 aa23.54■■□□□ 1.36
PUDP-203ENST00000424830 BARGINQ6ZT62 677 aa23.54■■□□□ 1.36
PUDP-203ENST00000424830 CCDC61Q9Y6R9 512 aa23.54■■□□□ 1.36
PUDP-203ENST00000424830 NBPF8Q3BBV2 869 aa23.53■■□□□ 1.36
PUDP-203ENST00000424830 ABTB2Q8N961 1025 aa23.52■■□□□ 1.36
PUDP-203ENST00000424830 CPDO75976 1380 aa23.5■■□□□ 1.35
PUDP-203ENST00000424830 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
PUDP-203ENST00000424830 PLEKHG3A1L390 1219 aa23.5■■□□□ 1.35
PUDP-203ENST00000424830 RREB1Q92766 1687 aa23.49■■□□□ 1.35
PUDP-203ENST00000424830 CAMTA1Q9Y6Y1 1673 aa23.49■■□□□ 1.35
PUDP-203ENST00000424830 TCP11L2Q8N4U5 519 aa23.49■■□□□ 1.35
PUDP-203ENST00000424830 LMO7Q8WWI1 1683 aa23.48■■□□□ 1.35
PUDP-203ENST00000424830 LARP1Q6PKG0 1096 aaKnown RBP23.48■■□□□ 1.35
PUDP-203ENST00000424830 NUP188Q5SRE5 1749 aa23.46■■□□□ 1.35
PUDP-203ENST00000424830 USP19O94966 1318 aa23.46■■□□□ 1.35
PUDP-203ENST00000424830 NBPF14Q5TI25 921 aa23.46■■□□□ 1.35
PUDP-203ENST00000424830 THRAP3Q9Y2W1 955 aaKnown RBP23.46■■□□□ 1.35
PUDP-203ENST00000424830 NLRP13Q86W25 1043 aa23.45■■□□□ 1.34
PUDP-203ENST00000424830 PPIP5K1Q6PFW1 1433 aa23.44■■□□□ 1.34
PUDP-203ENST00000424830 PARP4Q9UKK3 1724 aaKnown RBP23.44■■□□□ 1.34
PUDP-203ENST00000424830 SRPK2P78362 688 aaKnown RBP23.43■■□□□ 1.34
PUDP-203ENST00000424830 C11orf95C9JLR9 678 aaPredicted RBP23.42■■□□□ 1.34
PUDP-203ENST00000424830 COL5A2P05997 1499 aaPredicted RBP23.41■■□□□ 1.34
PUDP-203ENST00000424830 GCP02774 474 aa23.41■■□□□ 1.34
PUDP-203ENST00000424830 BRD4O60885 1362 aaPredicted RBP23.4■■□□□ 1.34
PUDP-203ENST00000424830 CRB1P82279 1406 aa23.39■■□□□ 1.34
PUDP-203ENST00000424830 CENPJQ9HC77 1338 aaPredicted RBP23.39■■□□□ 1.33
PUDP-203ENST00000424830 OVOS2A0A0G2JMS6 1433 aa23.38■■□□□ 1.33
PUDP-203ENST00000424830 OVOS2A0A0J9YW53 1432 aa23.38■■□□□ 1.33
PUDP-203ENST00000424830 OVOS2Q6IE36 1432 aa23.38■■□□□ 1.33
PUDP-203ENST00000424830 NBPF1Q3BBV0 1214 aa23.37■■□□□ 1.33
PUDP-203ENST00000424830 ZBTB7CA1YPR0 619 aa23.36■■□□□ 1.33
PUDP-203ENST00000424830 CABP2Q9NPB3 220 aa23.36■■□□□ 1.33
PUDP-203ENST00000424830 PPP1R1BQ9UD71 204 aaPredicted RBP23.35■■□□□ 1.33
PUDP-203ENST00000424830 QRICH2Q9H0J4 1663 aa23.35■■□□□ 1.33
PUDP-203ENST00000424830 SPON1Q9HCB6 807 aa23.34■■□□□ 1.33
PUDP-203ENST00000424830 RGPD3A6NKT7 1758 aaPredicted RBP23.34■■□□□ 1.33
PUDP-203ENST00000424830 RGPD4Q7Z3J3 1758 aa23.34■■□□□ 1.33
PUDP-203ENST00000424830 USP6P35125 1406 aa23.34■■□□□ 1.33
PUDP-203ENST00000424830 LRRC37A3O60309 1634 aa23.34■■□□□ 1.33
PUDP-203ENST00000424830 PEAK1Q9H792 1746 aa23.34■■□□□ 1.33
PUDP-203ENST00000424830 NLRP6P59044 892 aa23.33■■□□□ 1.33
PUDP-203ENST00000424830 AATKQ6ZMQ8 1374 aa23.33■■□□□ 1.33
PUDP-203ENST00000424830 SLIT3O75094 1523 aa23.32■■□□□ 1.32
PUDP-203ENST00000424830 DDB1Q16531 1140 aa23.32■■□□□ 1.32
PUDP-203ENST00000424830 SBF2Q86WG5 1849 aa23.31■■□□□ 1.32
PUDP-203ENST00000424830 KCNQ2O43526 872 aa23.31■■□□□ 1.32
PUDP-203ENST00000424830 YY1P25490 414 aa23.31■■□□□ 1.32
PUDP-203ENST00000424830 TOM1L2Q6ZVM7 507 aa23.31■■□□□ 1.32
PUDP-203ENST00000424830 CABP1Q9NZU7 370 aa23.31■■□□□ 1.32
PUDP-203ENST00000424830 DCAF8L1A6NGE4 600 aa23.3■■□□□ 1.32
PUDP-203ENST00000424830 NINLQ9Y2I6 1382 aa23.29■■□□□ 1.32
PUDP-203ENST00000424830 WNK3Q9BYP7 1800 aa23.28■■□□□ 1.32
PUDP-203ENST00000424830 PIK3C2AO00443 1686 aa23.28■■□□□ 1.32
PUDP-203ENST00000424830 PLSCR1O15162 318 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms