RNA–Protein interactions for RNA: ENST00000424320.5

SGIP1-205, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-205ENST00000424320 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
SGIP1-205ENST00000424320 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
SGIP1-205ENST00000424320 CLASP1Q7Z460 1538 aa12.15□□□□□ -0.46
SGIP1-205ENST00000424320 TOP2BQ02880 1626 aa12.15□□□□□ -0.47
SGIP1-205ENST00000424320 USB1Q9BQ65 265 aaKnown RBP12.14□□□□□ -0.47
SGIP1-205ENST00000424320 BIVM-ERCC5R4GMW8 1640 aa12.13□□□□□ -0.47
SGIP1-205ENST00000424320 CD46P15529 392 aa12.12□□□□□ -0.47
SGIP1-205ENST00000424320 WNT7BP56706 349 aa12.11□□□□□ -0.47
SGIP1-205ENST00000424320 ADAMTS12P58397 1594 aa12.1□□□□□ -0.47
SGIP1-205ENST00000424320 GRIN2AQ12879 1464 aa12.1□□□□□ -0.47
SGIP1-205ENST00000424320 SKOR1P84550 965 aa12.1□□□□□ -0.47
SGIP1-205ENST00000424320 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
SGIP1-205ENST00000424320 FHAD1B1AJZ9 1412 aa12.09□□□□□ -0.47
SGIP1-205ENST00000424320 KDM4AO75164 1064 aa12.08□□□□□ -0.48
SGIP1-205ENST00000424320 CCDC24Q8N4L8 307 aa12.06□□□□□ -0.48
SGIP1-205ENST00000424320 USP46P62068 366 aa12.05□□□□□ -0.48
SGIP1-205ENST00000424320 SLC16A10Q8TF71 515 aa12.05□□□□□ -0.48
SGIP1-205ENST00000424320 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
SGIP1-205ENST00000424320 GPIHBP1Q8IV16 184 aa12.04□□□□□ -0.48
SGIP1-205ENST00000424320 NXF1Q9UBU9 619 aaKnown RBP12.04□□□□□ -0.48
SGIP1-205ENST00000424320 ERICH3Q5RHP9 1530 aa12.04□□□□□ -0.48
SGIP1-205ENST00000424320 FAM181BA6NEQ2 426 aa12.02□□□□□ -0.49
SGIP1-205ENST00000424320 ALDH1A1P00352 501 aa12.02□□□□□ -0.49
SGIP1-205ENST00000424320 HLA-CQ95604 372 aa12.02□□□□□ -0.49
SGIP1-205ENST00000424320 NUP160Q12769 1436 aa12.02□□□□□ -0.49
SGIP1-205ENST00000424320 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
SGIP1-205ENST00000424320 NPAS3Q8IXF0 933 aa12.01□□□□□ -0.49
SGIP1-205ENST00000424320 HOXA2O43364 376 aa12□□□□□ -0.49
SGIP1-205ENST00000424320 JUNDP17535 347 aa12□□□□□ -0.49
SGIP1-205ENST00000424320 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
SGIP1-205ENST00000424320 LORP23490 312 aaPredicted RBP11.99□□□□□ -0.49
SGIP1-205ENST00000424320 KIF27Q86VH2 1401 aa11.99□□□□□ -0.49
SGIP1-205ENST00000424320 PRG4Q92954 1404 aaPredicted RBP11.98□□□□□ -0.49
SGIP1-205ENST00000424320 SIAH2O43255 324 aa11.98□□□□□ -0.49
SGIP1-205ENST00000424320 GMPRP36959 345 aa11.98□□□□□ -0.49
SGIP1-205ENST00000424320 TRIM46Q7Z4K8 759 aa11.98□□□□□ -0.49
SGIP1-205ENST00000424320 IRF7Q92985 503 aa11.97□□□□□ -0.49
SGIP1-205ENST00000424320 BMP1P13497 986 aa11.96□□□□□ -0.49
SGIP1-205ENST00000424320 MAP2K5Q13163 448 aa11.96□□□□□ -0.49
SGIP1-205ENST00000424320 ZSCAN1Q8NBB4 408 aa11.96□□□□□ -0.49
SGIP1-205ENST00000424320 CAPN5O15484 640 aaPredicted RBP11.95□□□□□ -0.5
SGIP1-205ENST00000424320 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
SGIP1-205ENST00000424320 H3BM21 787 aa11.93□□□□□ -0.5
SGIP1-205ENST00000424320 MDM2Q00987 491 aaPredicted RBP11.93□□□□□ -0.5
SGIP1-205ENST00000424320 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
SGIP1-205ENST00000424320 NUDT12Q9BQG2 462 aa11.93□□□□□ -0.5
SGIP1-205ENST00000424320 WASF2Q9Y6W5 498 aa11.93□□□□□ -0.5
SGIP1-205ENST00000424320 RUSC2Q8N2Y8 1516 aa11.92□□□□□ -0.5
SGIP1-205ENST00000424320 GUCA2AQ02747 115 aa11.92□□□□□ -0.5
SGIP1-205ENST00000424320 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
SGIP1-205ENST00000424320 IGF1RP08069 1367 aa11.92□□□□□ -0.5
SGIP1-205ENST00000424320 IRF6O14896 467 aa11.91□□□□□ -0.5
SGIP1-205ENST00000424320 RETREG3Q86VR2 466 aa11.91□□□□□ -0.5
SGIP1-205ENST00000424320 SYMPKQ92797 1274 aaKnown RBP11.91□□□□□ -0.5
SGIP1-205ENST00000424320 CUL7Q14999 1698 aa11.9□□□□□ -0.5
SGIP1-205ENST00000424320 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
SGIP1-205ENST00000424320 VEGFBP49765 207 aa11.88□□□□□ -0.51
SGIP1-205ENST00000424320 SH3BP2P78314 561 aa11.88□□□□□ -0.51
SGIP1-205ENST00000424320 ERBB4Q15303 1308 aa11.87□□□□□ -0.51
SGIP1-205ENST00000424320 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
SGIP1-205ENST00000424320 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
SGIP1-205ENST00000424320 ZFP42Q96MM3 310 aa11.85□□□□□ -0.51
SGIP1-205ENST00000424320 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
SGIP1-205ENST00000424320 LOC100996750A0A140TA64 210 aa11.84□□□□□ -0.51
SGIP1-205ENST00000424320 CCNYL3P0C7X3 344 aa11.84□□□□□ -0.51
SGIP1-205ENST00000424320 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
SGIP1-205ENST00000424320 KRTAP4-6Q9BYQ5 205 aa11.84□□□□□ -0.51
SGIP1-205ENST00000424320 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
SGIP1-205ENST00000424320 MS4A1P11836 297 aa11.82□□□□□ -0.52
SGIP1-205ENST00000424320 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
SGIP1-205ENST00000424320 CARMIL2Q6F5E8 1435 aa11.82□□□□□ -0.52
SGIP1-205ENST00000424320 PTPRGP23470 1445 aa11.81□□□□□ -0.52
SGIP1-205ENST00000424320 CLCN1P35523 988 aa11.81□□□□□ -0.52
SGIP1-205ENST00000424320 MPNDQ8N594 471 aa11.81□□□□□ -0.52
SGIP1-205ENST00000424320 FDX1P10109 184 aa11.8□□□□□ -0.52
SGIP1-205ENST00000424320 PTPRNQ16849 979 aa11.8□□□□□ -0.52
SGIP1-205ENST00000424320 CCDC102AQ96A19 550 aa11.8□□□□□ -0.52
SGIP1-205ENST00000424320 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
SGIP1-205ENST00000424320 PCDHGC3Q9UN70 934 aa11.8□□□□□ -0.52
SGIP1-205ENST00000424320 TLL2Q9Y6L7 1015 aa11.8□□□□□ -0.52
SGIP1-205ENST00000424320 EVA1BQ9NVM1 165 aa11.79□□□□□ -0.52
SGIP1-205ENST00000424320 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
SGIP1-205ENST00000424320 RAPGEF2Q9Y4G8 1499 aa11.78□□□□□ -0.52
SGIP1-205ENST00000424320 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
SGIP1-205ENST00000424320 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
SGIP1-205ENST00000424320 MRPL14Q6P1L8 145 aaKnown RBP11.78□□□□□ -0.52
SGIP1-205ENST00000424320 IQGAP2Q13576 1575 aa11.78□□□□□ -0.52
SGIP1-205ENST00000424320 VSIG8P0DPA2 414 aa11.77□□□□□ -0.53
SGIP1-205ENST00000424320 VARSP26640 1264 aaKnown RBP11.77□□□□□ -0.53
SGIP1-205ENST00000424320 NNTQ13423 1086 aa11.77□□□□□ -0.53
SGIP1-205ENST00000424320 BAP1Q92560 729 aa11.77□□□□□ -0.53
SGIP1-205ENST00000424320 ADCY10Q96PN6 1610 aa11.77□□□□□ -0.53
SGIP1-205ENST00000424320 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
SGIP1-205ENST00000424320 KCNH2Q12809 1159 aa11.75□□□□□ -0.53
SGIP1-205ENST00000424320 ZNF511Q8NB15 262 aa11.75□□□□□ -0.53
SGIP1-205ENST00000424320 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
SGIP1-205ENST00000424320 SCARF1Q14162 830 aa11.74□□□□□ -0.53
SGIP1-205ENST00000424320 ABCC10Q5T3U5 1492 aa11.74□□□□□ -0.53
SGIP1-205ENST00000424320 MAPKBP1O60336 1514 aa11.73□□□□□ -0.53
SGIP1-205ENST00000424320 TIMP2P16035 220 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms