RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	C14orf93	Q9H972	538 aa	Known RBP	13.56	□□□□□ -0.24
POLR1A-204	ENST00000424089	ZBED9	Q6R2W3	1325 aa		13.56	□□□□□ -0.24
POLR1A-204	ENST00000424089	SBNO2	Q9Y2G9	1366 aa		13.56	□□□□□ -0.24
POLR1A-204	ENST00000424089	FMN2	Q9NZ56	1722 aa		13.56	□□□□□ -0.24
POLR1A-204	ENST00000424089	NWD2	Q9ULI1	1742 aa		13.56	□□□□□ -0.24
POLR1A-204	ENST00000424089	SEPT12	Q8IYM1	358 aa		13.55	□□□□□ -0.24
POLR1A-204	ENST00000424089	TMC1	Q8TDI8	760 aa		13.55	□□□□□ -0.24
POLR1A-204	ENST00000424089	CCDC9	Q9Y3X0	531 aa	Known RBP	13.55	□□□□□ -0.24
POLR1A-204	ENST00000424089	SPATA31A3	Q5VYP0	1347 aa		13.55	□□□□□ -0.24
POLR1A-204	ENST00000424089	KNDC1	Q76NI1	1749 aa		13.55	□□□□□ -0.24
POLR1A-204	ENST00000424089	PARD3	Q8TEW0	1356 aa		13.55	□□□□□ -0.24
POLR1A-204	ENST00000424089	PLCH1	Q4KWH8	1693 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089	IFT172	Q9UG01	1749 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089	PSME1	Q06323	249 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089	CFAP70	Q5T0N1	1121 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089	NLRP13	Q86W25	1043 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089	FAM9B	Q8IZU0	186 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089	STK26	Q9P289	416 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089	TECPR2	O15040	1411 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089	PIK3C2G	O75747	1445 aa		13.54	□□□□□ -0.24
POLR1A-204	ENST00000424089		A0A0G2JS52	829 aa		13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	NEFL	P07196	543 aa		13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	MYT1	Q01538	1121 aa		13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	VPS72	Q15906	364 aa		13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	KRT28	Q7Z3Y7	464 aa		13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	KRT27	Q7Z3Y8	459 aa		13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	PNISR	Q8TF01	805 aa	Known RBP	13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	PANK3	Q9H999	370 aa		13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	INSR	P06213	1382 aa		13.53	□□□□□ -0.24
POLR1A-204	ENST00000424089	R3HDM1	Q15032	1099 aa	Known RBP	13.52	□□□□□ -0.25
POLR1A-204	ENST00000424089	WAPL	Q7Z5K2	1190 aa		13.52	□□□□□ -0.25
POLR1A-204	ENST00000424089	PELP1	Q8IZL8	1130 aa	Known RBP	13.52	□□□□□ -0.25
POLR1A-204	ENST00000424089	PUS7	Q96PZ0	661 aa	Known RBP	13.52	□□□□□ -0.25
POLR1A-204	ENST00000424089	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.52	□□□□□ -0.25
POLR1A-204	ENST00000424089	TNS3	Q68CZ2	1445 aa		13.52	□□□□□ -0.25
POLR1A-204	ENST00000424089	NPC1L1	Q9UHC9	1359 aa		13.51	□□□□□ -0.25
POLR1A-204	ENST00000424089	RGPD8	O14715	1765 aa	Predicted RBP	13.5	□□□□□ -0.25
POLR1A-204	ENST00000424089	ABCC11	Q96J66	1382 aa		13.5	□□□□□ -0.25
POLR1A-204	ENST00000424089	ARHGEF10	O15013	1369 aa		13.49	□□□□□ -0.25
POLR1A-204	ENST00000424089	ONECUT3	O60422	494 aa	Predicted RBP	13.49	□□□□□ -0.25
POLR1A-204	ENST00000424089	LMOD2	Q6P5Q4	547 aa		13.49	□□□□□ -0.25
POLR1A-204	ENST00000424089	PHF8	Q9UPP1	1060 aa		13.49	□□□□□ -0.25
POLR1A-204	ENST00000424089	KNSTRN	Q9Y448	316 aa		13.49	□□□□□ -0.25
POLR1A-204	ENST00000424089	ABCA3	Q99758	1704 aa		13.49	□□□□□ -0.25
POLR1A-204	ENST00000424089	RGPD1	P0DJD0	1748 aa		13.48	□□□□□ -0.25
POLR1A-204	ENST00000424089	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.48	□□□□□ -0.25
POLR1A-204	ENST00000424089	DCAF8L1	A6NGE4	600 aa		13.48	□□□□□ -0.25
POLR1A-204	ENST00000424089	PLEKHG5	O94827	1062 aa		13.48	□□□□□ -0.25
POLR1A-204	ENST00000424089	EN1	Q05925	392 aa	Predicted RBP	13.48	□□□□□ -0.25
POLR1A-204	ENST00000424089	ERICH6B	Q5W0A0	696 aa		13.48	□□□□□ -0.25
POLR1A-204	ENST00000424089	SBNO1	A3KN83	1393 aa		13.47	□□□□□ -0.25
POLR1A-204	ENST00000424089	PLEKHH1	Q9ULM0	1364 aa		13.47	□□□□□ -0.25
POLR1A-204	ENST00000424089	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.47	□□□□□ -0.25
POLR1A-204	ENST00000424089	TMEM132E	Q6IEE7	984 aa		13.46	□□□□□ -0.25
POLR1A-204	ENST00000424089	CABLES1	Q8TDN4	633 aa		13.46	□□□□□ -0.25
POLR1A-204	ENST00000424089	ADGRB1	O14514	1584 aa		13.45	□□□□□ -0.26
POLR1A-204	ENST00000424089	SIRT1	Q96EB6	747 aa		13.45	□□□□□ -0.26
POLR1A-204	ENST00000424089	NRAP	Q86VF7	1730 aa		13.44	□□□□□ -0.26
POLR1A-204	ENST00000424089	COL14A1	Q05707	1796 aa	Known RBP	13.43	□□□□□ -0.26
POLR1A-204	ENST00000424089	FAM98C	Q17RN3	349 aa	Known RBP	13.43	□□□□□ -0.26
POLR1A-204	ENST00000424089	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.43	□□□□□ -0.26
POLR1A-204	ENST00000424089	FAM83G	A6ND36	823 aa		13.42	□□□□□ -0.26
POLR1A-204	ENST00000424089	FKBP8	Q14318	412 aa		13.42	□□□□□ -0.26
POLR1A-204	ENST00000424089	CC2D1B	Q5T0F9	858 aa	Known RBP	13.42	□□□□□ -0.26
POLR1A-204	ENST00000424089	SMG6	Q86US8	1419 aa	Known RBP	13.41	□□□□□ -0.26
POLR1A-204	ENST00000424089	PDE3B	Q13370	1112 aa		13.41	□□□□□ -0.26
POLR1A-204	ENST00000424089	BTG4	Q9NY30	223 aa		13.41	□□□□□ -0.26
POLR1A-204	ENST00000424089	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.41	□□□□□ -0.26
POLR1A-204	ENST00000424089	ADGRB2	O60241	1585 aa		13.41	□□□□□ -0.26
POLR1A-204	ENST00000424089	ANKAR	Q7Z5J8	1434 aa		13.4	□□□□□ -0.26
POLR1A-204	ENST00000424089	CNGB1	Q14028	1251 aa	Predicted RBP	13.4	□□□□□ -0.26
POLR1A-204	ENST00000424089	FAM182B	Q5T319	152 aa		13.4	□□□□□ -0.26
POLR1A-204	ENST00000424089	TRAK1	Q9UPV9	953 aa		13.4	□□□□□ -0.26
POLR1A-204	ENST00000424089	EVC2	Q86UK5	1308 aa		13.39	□□□□□ -0.27
POLR1A-204	ENST00000424089	TNS1	Q9HBL0	1735 aa	Known RBP	13.39	□□□□□ -0.27
POLR1A-204	ENST00000424089	EZH2	Q15910	746 aa	Known RBP	13.39	□□□□□ -0.27
POLR1A-204	ENST00000424089	PMFBP1	Q8TBY8	1022 aa		13.39	□□□□□ -0.27
POLR1A-204	ENST00000424089	POGK	Q9P215	609 aa		13.39	□□□□□ -0.27
POLR1A-204	ENST00000424089	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.39	□□□□□ -0.27
POLR1A-204	ENST00000424089	DISP2	A7MBM2	1401 aa		13.39	□□□□□ -0.27
POLR1A-204	ENST00000424089	NINL	Q9Y2I6	1382 aa		13.38	□□□□□ -0.27
POLR1A-204	ENST00000424089	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
POLR1A-204	ENST00000424089	PRAM1	Q96QH2	718 aa		13.38	□□□□□ -0.27
POLR1A-204	ENST00000424089	NUDC	Q9Y266	331 aa		13.38	□□□□□ -0.27
POLR1A-204	ENST00000424089	ALS2	Q96Q42	1657 aa		13.37	□□□□□ -0.27
POLR1A-204	ENST00000424089	PPP2R1A	P30153	589 aa		13.37	□□□□□ -0.27
POLR1A-204	ENST00000424089	IFFO2	Q5TF58	517 aa		13.37	□□□□□ -0.27
POLR1A-204	ENST00000424089	SPATA31A5	Q5VU36	1347 aa		13.37	□□□□□ -0.27
POLR1A-204	ENST00000424089	SPATA31A7	Q8IWB4	1347 aa		13.37	□□□□□ -0.27
POLR1A-204	ENST00000424089	DLC1	Q96QB1	1528 aa		13.36	□□□□□ -0.27
POLR1A-204	ENST00000424089	SENP3-EIF4A1	A0A087X0R7	540 aa		13.36	□□□□□ -0.27
POLR1A-204	ENST00000424089	THSD7A	Q9UPZ6	1657 aa		13.36	□□□□□ -0.27
POLR1A-204	ENST00000424089	MYOM1	P52179	1685 aa		13.35	□□□□□ -0.27
POLR1A-204	ENST00000424089	PRDM11	Q9NQV5	511 aa		13.35	□□□□□ -0.27
POLR1A-204	ENST00000424089	FAM196A	Q6ZSG2	479 aa		13.34	□□□□□ -0.27
POLR1A-204	ENST00000424089	PAK3	O75914	559 aa	Predicted RBP	13.33	□□□□□ -0.28
POLR1A-204	ENST00000424089	TRIM37	O94972	964 aa		13.33	□□□□□ -0.28
POLR1A-204	ENST00000424089	APBA3	O96018	575 aa		13.33	□□□□□ -0.28
POLR1A-204	ENST00000424089	NBPF14	Q5TI25	921 aa		13.33	□□□□□ -0.28
POLR1A-204	ENST00000424089	CRYBG1	Q9Y4K1	1723 aa		13.33	□□□□□ -0.28

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