RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 PPIP5K1Q6PFW1 1433 aa25.47■■□□□ 1.67
SBDSP1-202ENST00000423945 RBM6P78332 1123 aaKnown RBP25.46■■□□□ 1.67
SBDSP1-202ENST00000423945 RGS12O14924 1447 aa25.46■■□□□ 1.67
SBDSP1-202ENST00000423945 PLCH1Q4KWH8 1693 aa25.45■■□□□ 1.67
SBDSP1-202ENST00000423945 CARD11Q9BXL7 1154 aa25.45■■□□□ 1.66
SBDSP1-202ENST00000423945 PAK3O75914 559 aaPredicted RBP25.43■■□□□ 1.66
SBDSP1-202ENST00000423945 TRPC5Q9UL62 973 aaPredicted RBP25.43■■□□□ 1.66
SBDSP1-202ENST00000423945 EVC2Q86UK5 1308 aa25.42■■□□□ 1.66
SBDSP1-202ENST00000423945 SBNO2Q9Y2G9 1366 aa25.42■■□□□ 1.66
SBDSP1-202ENST00000423945 NWD2Q9ULI1 1742 aa25.41■■□□□ 1.66
SBDSP1-202ENST00000423945 HAP1P54257 671 aaPredicted RBP25.41■■□□□ 1.66
SBDSP1-202ENST00000423945 PHRF1Q9P1Y6 1649 aaKnown RBP25.41■■□□□ 1.66
SBDSP1-202ENST00000423945 CABP1Q9NZU7 370 aa25.4■■□□□ 1.66
SBDSP1-202ENST00000423945 FAM83GA6ND36 823 aa25.38■■□□□ 1.65
SBDSP1-202ENST00000423945 UNC5CLQ8IV45 518 aa25.38■■□□□ 1.65
SBDSP1-202ENST00000423945 GLI3P10071 1580 aa25.37■■□□□ 1.65
SBDSP1-202ENST00000423945 NRAPQ86VF7 1730 aa25.37■■□□□ 1.65
SBDSP1-202ENST00000423945 AKAP12Q02952 1782 aa25.36■■□□□ 1.65
SBDSP1-202ENST00000423945 NUTM2GQ5VZR2 741 aa25.35■■□□□ 1.65
SBDSP1-202ENST00000423945 COL14A1Q05707 1796 aaKnown RBP25.35■■□□□ 1.65
SBDSP1-202ENST00000423945 USP6P35125 1406 aa25.35■■□□□ 1.65
SBDSP1-202ENST00000423945 CLSPNQ9HAW4 1339 aa25.35■■□□□ 1.65
SBDSP1-202ENST00000423945 SSH2Q76I76 1423 aa25.34■■□□□ 1.65
SBDSP1-202ENST00000423945 GJD4Q96KN9 370 aaPredicted RBP25.33■■□□□ 1.65
SBDSP1-202ENST00000423945 NRKQ7Z2Y5 1582 aa25.32■■□□□ 1.64
SBDSP1-202ENST00000423945 BRD4O60885 1362 aaPredicted RBP25.31■■□□□ 1.64
SBDSP1-202ENST00000423945 ABTB2Q8N961 1025 aa25.3■■□□□ 1.64
SBDSP1-202ENST00000423945 USP19O94966 1318 aa25.3■■□□□ 1.64
SBDSP1-202ENST00000423945 ATAD2Q6PL18 1390 aa25.3■■□□□ 1.64
SBDSP1-202ENST00000423945 TESK2Q96S53 571 aa25.29■■□□□ 1.64
SBDSP1-202ENST00000423945 PIK3C2AO00443 1686 aa25.29■■□□□ 1.64
SBDSP1-202ENST00000423945 CPSF1Q10570 1443 aaKnown RBP25.29■■□□□ 1.64
SBDSP1-202ENST00000423945 VPS72Q15906 364 aa25.28■■□□□ 1.64
SBDSP1-202ENST00000423945 UPF1Q92900 1129 aaKnown RBP eCLIP25.28■■□□□ 1.64
SBDSP1-202ENST00000423945 KIAA0232Q92628 1395 aa25.28■■□□□ 1.64
SBDSP1-202ENST00000423945 BTG4Q9NY30 223 aa25.27■■□□□ 1.64
SBDSP1-202ENST00000423945 MON2Q7Z3U7 1717 aa25.26■■□□□ 1.63
SBDSP1-202ENST00000423945 ST20-MTHFSA0A0A6YYL1 179 aa25.26■■□□□ 1.63
SBDSP1-202ENST00000423945 TIMELESSQ9UNS1 1208 aa25.26■■□□□ 1.63
SBDSP1-202ENST00000423945 CD163L1Q9NR16 1453 aa25.26■■□□□ 1.63
SBDSP1-202ENST00000423945 PRDM11Q9NQV5 511 aa25.25■■□□□ 1.63
SBDSP1-202ENST00000423945 BRWD3Q6RI45 1802 aa25.24■■□□□ 1.63
SBDSP1-202ENST00000423945 SLIT3O75094 1523 aa25.23■■□□□ 1.63
SBDSP1-202ENST00000423945 ZC3H6P61129 1189 aaKnown RBP25.23■■□□□ 1.63
SBDSP1-202ENST00000423945 CHRNA2Q15822 529 aa25.23■■□□□ 1.63
SBDSP1-202ENST00000423945 TTC21BQ7Z4L5 1316 aa25.22■■□□□ 1.63
SBDSP1-202ENST00000423945 NLRP13Q86W25 1043 aa25.22■■□□□ 1.63
SBDSP1-202ENST00000423945 ZNF692Q9BU19 519 aaPredicted RBP25.22■■□□□ 1.63
SBDSP1-202ENST00000423945 LMO7Q8WWI1 1683 aa25.22■■□□□ 1.63
SBDSP1-202ENST00000423945 CPDO75976 1380 aa25.2■■□□□ 1.63
SBDSP1-202ENST00000423945 USP47Q96K76 1375 aa25.2■■□□□ 1.63
SBDSP1-202ENST00000423945 GCP02774 474 aa25.2■■□□□ 1.62
SBDSP1-202ENST00000423945 KTN1Q86UP2 1357 aaKnown RBP25.19■■□□□ 1.62
SBDSP1-202ENST00000423945 EP400Q96L91 3159 aa25.19■■□□□ 1.62
SBDSP1-202ENST00000423945 PUS7Q96PZ0 661 aaKnown RBP25.19■■□□□ 1.62
SBDSP1-202ENST00000423945 CAMTA1Q9Y6Y1 1673 aa25.18■■□□□ 1.62
SBDSP1-202ENST00000423945 ONECUT3O60422 494 aaPredicted RBP25.18■■□□□ 1.62
SBDSP1-202ENST00000423945 NLRP6P59044 892 aa25.18■■□□□ 1.62
SBDSP1-202ENST00000423945 SLC12A5Q9H2X9 1139 aa25.18■■□□□ 1.62
SBDSP1-202ENST00000423945 CCER1Q8TC90 406 aaPredicted RBP25.17■■□□□ 1.62
SBDSP1-202ENST00000423945 CCDC9Q9Y3X0 531 aaKnown RBP25.17■■□□□ 1.62
SBDSP1-202ENST00000423945 SPATA31A5Q5VU36 1347 aa25.15■■□□□ 1.62
SBDSP1-202ENST00000423945 SPATA31A7Q8IWB4 1347 aa25.15■■□□□ 1.62
SBDSP1-202ENST00000423945 TTC21AQ8NDW8 1320 aa25.15■■□□□ 1.62
SBDSP1-202ENST00000423945 SEPT12Q8IYM1 358 aa25.15■■□□□ 1.62
SBDSP1-202ENST00000423945 TMC1Q8TDI8 760 aa25.15■■□□□ 1.62
SBDSP1-202ENST00000423945 USP54Q70EL1 1684 aa25.14■■□□□ 1.62
SBDSP1-202ENST00000423945 COL18A1P39060 1754 aa25.14■■□□□ 1.62
SBDSP1-202ENST00000423945 A0A1W2PP64 1363 aa25.13■■□□□ 1.61
SBDSP1-202ENST00000423945 THSD7AQ9UPZ6 1657 aa25.12■■□□□ 1.61
SBDSP1-202ENST00000423945 FAM98CQ17RN3 349 aaKnown RBP25.11■■□□□ 1.61
SBDSP1-202ENST00000423945 ZRANB1Q9UGI0 708 aa25.11■■□□□ 1.61
SBDSP1-202ENST00000423945 STRN4Q9NRL3 753 aa25.1■■□□□ 1.61
SBDSP1-202ENST00000423945 NFAT5O94916 1531 aa25.1■■□□□ 1.61
SBDSP1-202ENST00000423945 SPATA31A1Q5TZJ5 1347 aa25.1■■□□□ 1.61
SBDSP1-202ENST00000423945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.09■■□□□ 1.61
SBDSP1-202ENST00000423945 EDC4Q6P2E9 1401 aaKnown RBP25.09■■□□□ 1.61
SBDSP1-202ENST00000423945 USP31Q70CQ4 1352 aa25.08■■□□□ 1.61
SBDSP1-202ENST00000423945 HDGFL2Q7Z4V5 671 aaPredicted RBP25.08■■□□□ 1.61
SBDSP1-202ENST00000423945 COL5A2P05997 1499 aaPredicted RBP25.08■■□□□ 1.6
SBDSP1-202ENST00000423945 AATKQ6ZMQ8 1374 aa25.07■■□□□ 1.6
SBDSP1-202ENST00000423945 NINLQ9Y2I6 1382 aa25.07■■□□□ 1.6
SBDSP1-202ENST00000423945 SLC24A1O60721 1099 aa25.07■■□□□ 1.6
SBDSP1-202ENST00000423945 NME9Q86XW9 330 aa25.07■■□□□ 1.6
SBDSP1-202ENST00000423945 RGPD5Q99666 1765 aa25.06■■□□□ 1.6
SBDSP1-202ENST00000423945 TERF2IPQ9NYB0 399 aa25.06■■□□□ 1.6
SBDSP1-202ENST00000423945 TMF1P82094 1093 aa25.05■■□□□ 1.6
SBDSP1-202ENST00000423945 LARP1Q6PKG0 1096 aaKnown RBP25.05■■□□□ 1.6
SBDSP1-202ENST00000423945 ARHGEF25Q86VW2 580 aa25.05■■□□□ 1.6
SBDSP1-202ENST00000423945 ZBTB7CA1YPR0 619 aa25.04■■□□□ 1.6
SBDSP1-202ENST00000423945 EVA1CP58658 441 aa25.03■■□□□ 1.6
SBDSP1-202ENST00000423945 KRT27Q7Z3Y8 459 aa25.03■■□□□ 1.6
SBDSP1-202ENST00000423945 AXIN2Q9Y2T1 843 aa25.03■■□□□ 1.6
SBDSP1-202ENST00000423945 MYOM1P52179 1685 aa25.02■■□□□ 1.6
SBDSP1-202ENST00000423945 SOX12O15370 315 aa25.02■■□□□ 1.6
SBDSP1-202ENST00000423945 KCNH5Q8NCM2 988 aa25.02■■□□□ 1.6
SBDSP1-202ENST00000423945 A0A0G2JS52 829 aa25.01■■□□□ 1.59
SBDSP1-202ENST00000423945 MYT1Q01538 1121 aa25.01■■□□□ 1.59
SBDSP1-202ENST00000423945 OVOS2A0A0J9YW53 1432 aa25.01■■□□□ 1.59
SBDSP1-202ENST00000423945 OVOS2Q6IE36 1432 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms