RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
TNC-203ENST00000423613 WASHC2AQ641Q2 1341 aa13.28□□□□□ -0.28
TNC-203ENST00000423613 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
TNC-203ENST00000423613 CCDC112Q8NEF3 446 aa13.28□□□□□ -0.28
TNC-203ENST00000423613 CCDC102AQ96A19 550 aa13.28□□□□□ -0.28
TNC-203ENST00000423613 EIF3JO75822 258 aaKnown RBP13.28□□□□□ -0.28
TNC-203ENST00000423613 DDX58O95786 925 aaKnown RBP13.28□□□□□ -0.28
TNC-203ENST00000423613 RUSC2Q8N2Y8 1516 aa13.28□□□□□ -0.28
TNC-203ENST00000423613 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
TNC-203ENST00000423613 NLRP2Q9NX02 1062 aa13.28□□□□□ -0.28
TNC-203ENST00000423613 KDM4AO75164 1064 aa13.27□□□□□ -0.28
TNC-203ENST00000423613 GTF2A1P52655 376 aaPredicted RBP13.27□□□□□ -0.28
TNC-203ENST00000423613 OLFM4Q6UX06 510 aa13.27□□□□□ -0.28
TNC-203ENST00000423613 SEPT7Q16181 437 aaKnown RBP13.27□□□□□ -0.29
TNC-203ENST00000423613 PIP4K2BP78356 416 aa13.27□□□□□ -0.29
TNC-203ENST00000423613 NAT10Q9H0A0 1025 aaKnown RBP13.27□□□□□ -0.29
TNC-203ENST00000423613 FAM69CQ0P6D2 419 aa13.27□□□□□ -0.29
TNC-203ENST00000423613 AIMP1Q12904 312 aaKnown RBP13.27□□□□□ -0.29
TNC-203ENST00000423613 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
TNC-203ENST00000423613 RUNDC1Q96C34 613 aa13.26□□□□□ -0.29
TNC-203ENST00000423613 CCP110O43303 1012 aa13.26□□□□□ -0.29
TNC-203ENST00000423613 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
TNC-203ENST00000423613 NUCB2P80303 420 aa13.26□□□□□ -0.29
TNC-203ENST00000423613 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
TNC-203ENST00000423613 GOLGA6L10A0A0M3HER8 536 aa13.26□□□□□ -0.29
TNC-203ENST00000423613 CCDC73Q6ZRK6 1079 aa13.26□□□□□ -0.29
TNC-203ENST00000423613 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
TNC-203ENST00000423613 G3BP1Q13283 466 aaKnown RBP eCLIP13.25□□□□□ -0.29
TNC-203ENST00000423613 LRRCC1Q9C099 1032 aa13.25□□□□□ -0.29
TNC-203ENST00000423613 LNPKQ9C0E8 428 aa13.25□□□□□ -0.29
TNC-203ENST00000423613 SMC3Q9UQE7 1217 aa13.25□□□□□ -0.29
TNC-203ENST00000423613 NEUROD6Q96NK8 337 aa13.25□□□□□ -0.29
TNC-203ENST00000423613 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
TNC-203ENST00000423613 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
TNC-203ENST00000423613 ZFP91Q96JP5 570 aaPredicted RBP13.24□□□□□ -0.29
TNC-203ENST00000423613 EPS15P42566 896 aa13.24□□□□□ -0.29
TNC-203ENST00000423613 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
TNC-203ENST00000423613 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
TNC-203ENST00000423613 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
TNC-203ENST00000423613 CALCOCO1Q9P1Z2 691 aa13.24□□□□□ -0.29
TNC-203ENST00000423613 ERLIN2O94905 339 aa13.24□□□□□ -0.29
TNC-203ENST00000423613 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
TNC-203ENST00000423613 ERLIN1O75477 346 aa13.23□□□□□ -0.29
TNC-203ENST00000423613 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
TNC-203ENST00000423613 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
TNC-203ENST00000423613 OFD1O75665 1012 aa13.23□□□□□ -0.29
TNC-203ENST00000423613 PTPRGP23470 1445 aa13.23□□□□□ -0.29
TNC-203ENST00000423613 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
TNC-203ENST00000423613 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
TNC-203ENST00000423613 C22orf23Q9BZE7 217 aa13.22□□□□□ -0.29
TNC-203ENST00000423613 PANK1Q8TE04 598 aa13.22□□□□□ -0.29
TNC-203ENST00000423613 HMOX1P09601 288 aa13.22□□□□□ -0.29
TNC-203ENST00000423613 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
TNC-203ENST00000423613 SHTN1A0MZ66 631 aa13.21□□□□□ -0.29
TNC-203ENST00000423613 GNAI1P63096 354 aa13.21□□□□□ -0.29
TNC-203ENST00000423613 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
TNC-203ENST00000423613 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.29
TNC-203ENST00000423613 SMARCE1Q969G3 411 aa13.21□□□□□ -0.29
TNC-203ENST00000423613 CFAP45Q9UL16 551 aa13.21□□□□□ -0.29
TNC-203ENST00000423613 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.3
TNC-203ENST00000423613 GRPEL1Q9HAV7 217 aa13.21□□□□□ -0.3
TNC-203ENST00000423613 PRPF40AO75400 957 aaKnown RBP13.21□□□□□ -0.3
TNC-203ENST00000423613 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.3
TNC-203ENST00000423613 RNF187Q5TA31 235 aaPredicted RBP13.2□□□□□ -0.3
TNC-203ENST00000423613 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
TNC-203ENST00000423613 GTF2F1P35269 517 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNC-203ENST00000423613 CEP63Q96MT8 703 aa13.2□□□□□ -0.3
TNC-203ENST00000423613 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNC-203ENST00000423613 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
TNC-203ENST00000423613 POLR3GO15318 223 aaPredicted RBP13.2□□□□□ -0.3
TNC-203ENST00000423613 CNTLNQ9NXG0 1405 aa13.19□□□□□ -0.3
TNC-203ENST00000423613 TMCO3Q6UWJ1 677 aa13.19□□□□□ -0.3
TNC-203ENST00000423613 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
TNC-203ENST00000423613 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
TNC-203ENST00000423613 ERC2O15083 957 aa13.18□□□□□ -0.3
TNC-203ENST00000423613 KIF6Q6ZMV9 814 aa13.18□□□□□ -0.3
TNC-203ENST00000423613 GGNBP2Q9H3C7 697 aa13.18□□□□□ -0.3
TNC-203ENST00000423613 MAP2K1Q02750 393 aaPredicted RBP13.18□□□□□ -0.3
TNC-203ENST00000423613 HSP90AB4PQ58FF6 505 aa13.18□□□□□ -0.3
TNC-203ENST00000423613 MYOM3Q5VTT5 1437 aa13.18□□□□□ -0.3
TNC-203ENST00000423613 SAFBQ15424 915 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNC-203ENST00000423613 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
TNC-203ENST00000423613 CDC45O75419 566 aa13.17□□□□□ -0.3
TNC-203ENST00000423613 EZRP15311 586 aaKnown RBP13.17□□□□□ -0.3
TNC-203ENST00000423613 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
TNC-203ENST00000423613 RABEP1Q15276 862 aa13.17□□□□□ -0.3
TNC-203ENST00000423613 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
TNC-203ENST00000423613 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
TNC-203ENST00000423613 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
TNC-203ENST00000423613 PPM1FP49593 454 aaPredicted RBP13.16□□□□□ -0.3
TNC-203ENST00000423613 PDCL3Q9H2J4 239 aa13.16□□□□□ -0.3
TNC-203ENST00000423613 ESPNB1AK53 854 aa13.16□□□□□ -0.3
TNC-203ENST00000423613 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
TNC-203ENST00000423613 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
TNC-203ENST00000423613 RALYLQ86SE5 291 aaKnown RBP13.15□□□□□ -0.3
TNC-203ENST00000423613 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
TNC-203ENST00000423613 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.3
TNC-203ENST00000423613 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
TNC-203ENST00000423613 FGD6Q6ZV73 1430 aa13.15□□□□□ -0.3
TNC-203ENST00000423613 DNAJC2Q99543 621 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms