RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
SCN5A-205ENST00000423572 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
SCN5A-205ENST00000423572 ZNF287Q9HBT7 754 aa13.24□□□□□ -0.29
SCN5A-205ENST00000423572 TOM1O60784 492 aa13.24□□□□□ -0.29
SCN5A-205ENST00000423572 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
SCN5A-205ENST00000423572 RIPK4P57078 832 aa13.23□□□□□ -0.29
SCN5A-205ENST00000423572 TTC16Q8NEE8 873 aa13.23□□□□□ -0.29
SCN5A-205ENST00000423572 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
SCN5A-205ENST00000423572 HMOX1P09601 288 aa13.23□□□□□ -0.29
SCN5A-205ENST00000423572 MTHFSP49914 203 aa13.23□□□□□ -0.29
SCN5A-205ENST00000423572 FEZ1Q99689 392 aa13.23□□□□□ -0.29
SCN5A-205ENST00000423572 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.29
SCN5A-205ENST00000423572 USP5P45974 858 aa13.22□□□□□ -0.29
SCN5A-205ENST00000423572 PABPN1LA6NDY0 278 aaKnown RBP13.22□□□□□ -0.29
SCN5A-205ENST00000423572 LMOD1P29536 600 aaPredicted RBP13.22□□□□□ -0.29
SCN5A-205ENST00000423572 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
SCN5A-205ENST00000423572 ARHGAP5Q13017 1502 aa13.21□□□□□ -0.29
SCN5A-205ENST00000423572 DDX11L8A8MPP1 907 aa13.21□□□□□ -0.29
SCN5A-205ENST00000423572 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
SCN5A-205ENST00000423572 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.29
SCN5A-205ENST00000423572 CAGE1Q8TC20 777 aa13.21□□□□□ -0.29
SCN5A-205ENST00000423572 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
SCN5A-205ENST00000423572 ANAPC15P60006 121 aa13.2□□□□□ -0.3
SCN5A-205ENST00000423572 MYL6BP14649 208 aa13.2□□□□□ -0.3
SCN5A-205ENST00000423572 ATP2B1P20020 1258 aa13.2□□□□□ -0.3
SCN5A-205ENST00000423572 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
SCN5A-205ENST00000423572 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
SCN5A-205ENST00000423572 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
SCN5A-205ENST00000423572 VPS8Q8N3P4 1428 aa13.2□□□□□ -0.3
SCN5A-205ENST00000423572 COMMD10Q9Y6G5 202 aa13.2□□□□□ -0.3
SCN5A-205ENST00000423572 CCDC73Q6ZRK6 1079 aa13.19□□□□□ -0.3
SCN5A-205ENST00000423572 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
SCN5A-205ENST00000423572 TMOD3Q9NYL9 352 aa13.19□□□□□ -0.3
SCN5A-205ENST00000423572 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
SCN5A-205ENST00000423572 LRP2BPQ9P2M1 347 aa13.19□□□□□ -0.3
SCN5A-205ENST00000423572 CCDC69A6NI79 296 aa13.19□□□□□ -0.3
SCN5A-205ENST00000423572 CCDC181Q5TID7 509 aa13.19□□□□□ -0.3
SCN5A-205ENST00000423572 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
SCN5A-205ENST00000423572 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
SCN5A-205ENST00000423572 HMGN5P82970 282 aaKnown RBP13.18□□□□□ -0.3
SCN5A-205ENST00000423572 BMP2KQ9NSY1 1161 aaPredicted RBP13.18□□□□□ -0.3
SCN5A-205ENST00000423572 PSMA5P28066 241 aa13.18□□□□□ -0.3
SCN5A-205ENST00000423572 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
SCN5A-205ENST00000423572 SEPT11Q9NVA2 429 aaKnown RBP13.18□□□□□ -0.3
SCN5A-205ENST00000423572 SKOR2Q2VWA4 1001 aaPredicted RBP13.18□□□□□ -0.3
SCN5A-205ENST00000423572 CNTROBQ8N137 903 aa13.18□□□□□ -0.3
SCN5A-205ENST00000423572 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
SCN5A-205ENST00000423572 ST5P78524 1137 aa13.18□□□□□ -0.3
SCN5A-205ENST00000423572 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 XPCQ01831 940 aaPredicted RBP13.17□□□□□ -0.3
SCN5A-205ENST00000423572 STIM1Q13586 685 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 TRIM22Q8IYM9 498 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 PSMD1Q99460 953 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCN5A-205ENST00000423572 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
SCN5A-205ENST00000423572 EZRP15311 586 aaKnown RBP13.17□□□□□ -0.3
SCN5A-205ENST00000423572 TDO2P48775 406 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 ERLIN2O94905 339 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
SCN5A-205ENST00000423572 GNAI1P63096 354 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 CUL5Q93034 780 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 NAT10Q9H0A0 1025 aaKnown RBP13.17□□□□□ -0.3
SCN5A-205ENST00000423572 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
SCN5A-205ENST00000423572 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
SCN5A-205ENST00000423572 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
SCN5A-205ENST00000423572 RFC4P35249 363 aa13.16□□□□□ -0.3
SCN5A-205ENST00000423572 PANK3Q9H999 370 aa13.16□□□□□ -0.3
SCN5A-205ENST00000423572 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
SCN5A-205ENST00000423572 CLASRPQ8N2M8 674 aaKnown RBP13.16□□□□□ -0.3
SCN5A-205ENST00000423572 TANGO6Q9C0B7 1094 aa13.16□□□□□ -0.3
SCN5A-205ENST00000423572 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
SCN5A-205ENST00000423572 KIF15Q9NS87 1388 aa13.16□□□□□ -0.3
SCN5A-205ENST00000423572 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
SCN5A-205ENST00000423572 DZIP1Q86YF9 867 aaKnown RBP13.15□□□□□ -0.3
SCN5A-205ENST00000423572 PDILTQ8N807 584 aa13.15□□□□□ -0.3
SCN5A-205ENST00000423572 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
SCN5A-205ENST00000423572 C6orf229H3BNL8 230 aa13.15□□□□□ -0.31
SCN5A-205ENST00000423572 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.31
SCN5A-205ENST00000423572 CBX1P83916 185 aa13.14□□□□□ -0.31
SCN5A-205ENST00000423572 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
SCN5A-205ENST00000423572 RGS22Q8NE09 1264 aa13.14□□□□□ -0.31
SCN5A-205ENST00000423572 HIP1O00291 1037 aa13.14□□□□□ -0.31
SCN5A-205ENST00000423572 PODXL2Q9NZ53 605 aa13.14□□□□□ -0.31
SCN5A-205ENST00000423572 TAF12Q16514 161 aa13.14□□□□□ -0.31
SCN5A-205ENST00000423572 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
SCN5A-205ENST00000423572 FILIP1LQ4L180 1135 aa13.13□□□□□ -0.31
SCN5A-205ENST00000423572 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
SCN5A-205ENST00000423572 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
SCN5A-205ENST00000423572 UQCRHP07919 91 aa13.13□□□□□ -0.31
SCN5A-205ENST00000423572 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCN5A-205ENST00000423572 FAM161AQ3B820 660 aa13.13□□□□□ -0.31
SCN5A-205ENST00000423572 ABCF2Q9UG63 623 aa13.13□□□□□ -0.31
SCN5A-205ENST00000423572 SMARCE1Q969G3 411 aa13.13□□□□□ -0.31
SCN5A-205ENST00000423572 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
SCN5A-205ENST00000423572 SKIDA1Q1XH10 827 aa13.13□□□□□ -0.31
SCN5A-205ENST00000423572 E9PSI1 815 aa13.12□□□□□ -0.31
SCN5A-205ENST00000423572 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms