RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 RPGRQ92834 1020 aaKnown RBP4.55□□□□□ -1.68
TOP2A-201ENST00000423485 UTP14AQ9BVJ6 771 aaKnown RBP4.55□□□□□ -1.68
TOP2A-201ENST00000423485 ATF5Q9Y2D1 282 aaPredicted RBP4.55□□□□□ -1.68
TOP2A-201ENST00000423485 SPATA31A6Q5VVP1 1343 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 RAD21O60216 631 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 OS9Q13438 667 aaPredicted RBP4.55□□□□□ -1.68
TOP2A-201ENST00000423485 IQCA1LA6NCM1 817 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 HSP90AB1P08238 724 aaKnown RBP4.55□□□□□ -1.68
TOP2A-201ENST00000423485 PDE6BP35913 854 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 R3HDM1Q15032 1099 aaKnown RBP4.55□□□□□ -1.68
TOP2A-201ENST00000423485 KIF6Q6ZMV9 814 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 DPF3Q92784 378 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 SIN3AQ96ST3 1273 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 MPHOSPH6Q99547 160 aaKnown RBP4.55□□□□□ -1.68
TOP2A-201ENST00000423485 RRP7BPQ9NSQ0 103 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 IFT172Q9UG01 1749 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 NBPF20Q3BBV1 942 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 DAXXQ9UER7 740 aaPredicted RBP4.55□□□□□ -1.68
TOP2A-201ENST00000423485 ZNF644Q9H582 1327 aaPredicted RBP4.54□□□□□ -1.68
TOP2A-201ENST00000423485 UIMC1Q96RL1 719 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 CHMP3Q9Y3E7 222 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 GJA3Q9Y6H8 435 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 MYOM3Q5VTT5 1437 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 UACAQ9BZF9 1416 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 ZZEF1O43149 2961 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 DNMBPQ6XZF7 1577 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 STK25O00506 426 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 MLLT1Q03111 559 aaPredicted RBP4.54□□□□□ -1.68
TOP2A-201ENST00000423485 WDR78Q5VTH9 848 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 ABTB2Q8N961 1025 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 EFCAB5A4FU69 1503 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 AFF2P51816 1311 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 FHOD3Q2V2M9 1422 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 PHF14O94880 888 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 VPS53Q5VIR6 699 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 SPG7Q9UQ90 795 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 HCN4Q9Y3Q4 1203 aa4.54□□□□□ -1.68
TOP2A-201ENST00000423485 MARF1Q9Y4F3 1742 aaKnown RBP4.53□□□□□ -1.68
TOP2A-201ENST00000423485 WWC1Q8IX03 1113 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 SMC1BQ8NDV3 1235 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 JCADQ9P266 1359 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 SHROOM2Q13796 1616 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 SECISBP2LQ93073 1101 aaKnown RBP4.53□□□□□ -1.68
TOP2A-201ENST00000423485 SLC26A8Q96RN1 970 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 C19orf44Q9H6X5 657 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 STK24Q9Y6E0 443 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 TCOF1Q13428 1488 aaKnown RBP4.53□□□□□ -1.68
TOP2A-201ENST00000423485 SETD1AO15047 1707 aaKnown RBP4.53□□□□□ -1.68
TOP2A-201ENST00000423485 AFAP1Q8N556 730 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 HOOK2Q96ED9 719 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 SETD5Q9C0A6 1442 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 ANKRD30BQ9BXX2 1392 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 CHAMP1Q96JM3 812 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 TNRQ92752 1358 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 KCNG4Q8TDN1 519 aa4.53□□□□□ -1.68
TOP2A-201ENST00000423485 TEFQ10587 303 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 PLCD3Q8N3E9 789 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 C2orf69Q8N8R5 385 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 CCER1Q8TC90 406 aaPredicted RBP4.52□□□□□ -1.69
TOP2A-201ENST00000423485 KDM5CP41229 1560 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 MPHOSPH10O00566 681 aaKnown RBP4.52□□□□□ -1.69
TOP2A-201ENST00000423485 SAMD1Q6SPF0 538 aaPredicted RBP4.52□□□□□ -1.69
TOP2A-201ENST00000423485 ANP32EQ9BTT0 268 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 SHPRHQ149N8 1683 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 ADAMTS12P58397 1594 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 MYO5BQ9ULV0 1848 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 HECW1Q76N89 1606 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 H7C1D1 291 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 CTCFP49711 727 aaPredicted RBP4.52□□□□□ -1.69
TOP2A-201ENST00000423485 SART3Q15020 963 aaKnown RBP4.52□□□□□ -1.69
TOP2A-201ENST00000423485 CCDC152Q4G0S7 254 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 ELMSAN1Q6PJG2 1045 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 DCPSQ96C86 337 aaKnown RBP4.52□□□□□ -1.69
TOP2A-201ENST00000423485 COG3Q96JB2 828 aa4.52□□□□□ -1.69
TOP2A-201ENST00000423485 UBXN2AP68543 259 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 OGFOD1Q8N543 542 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 SUPT20HQ8NEM7 779 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 HTATIP2Q9BUP3 242 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 SLAIN2Q9P270 581 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 WDR43Q15061 677 aaKnown RBP eCLIP4.51□□□□□ -1.69
TOP2A-201ENST00000423485 CCDC129Q6ZRS4 1044 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 SKAP1Q86WV1 359 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 NOL8Q76FK4 1167 aaKnown RBP4.51□□□□□ -1.69
TOP2A-201ENST00000423485 SLC52A1Q9NWF4 448 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 PRRC2CQ9Y520 2896 aaKnown RBP4.51□□□□□ -1.69
TOP2A-201ENST00000423485 FAM50BQ9Y247 325 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 R3HCC1Q9Y3T6 440 aaKnown RBP4.51□□□□□ -1.69
TOP2A-201ENST00000423485 RNF123Q5XPI4 1314 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 KDM5DQ9BY66 1539 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 H0YIN7 160 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 NLRP6P59044 892 aa4.51□□□□□ -1.69
TOP2A-201ENST00000423485 MAP2K1Q02750 393 aaPredicted RBP4.5□□□□□ -1.69
TOP2A-201ENST00000423485 TPRNQ4KMQ1 711 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 AKAP4Q5JQC9 854 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 KRT28Q7Z3Y7 464 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 PPP2R3CQ969Q6 453 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 ARID3AQ99856 593 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 MYO5CQ9NQX4 1742 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 KIAA0586Q9BVV6 1533 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 CAMSAP2Q08AD1 1489 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms