RNA–Protein interactions for RNA: ENST00000422669.1

LTBP1-208, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 5

Gene LTBP1, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-208ENST00000422669 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
LTBP1-208ENST00000422669 GJD4Q96KN9 370 aaPredicted RBP13.3□□□□□ -0.28
LTBP1-208ENST00000422669 SLIT2O94813 1529 aa13.29□□□□□ -0.28
LTBP1-208ENST00000422669 PLCH1Q4KWH8 1693 aa13.29□□□□□ -0.28
LTBP1-208ENST00000422669 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
LTBP1-208ENST00000422669 KRT28Q7Z3Y7 464 aa13.29□□□□□ -0.28
LTBP1-208ENST00000422669 RALGAPBQ86X10 1494 aa13.29□□□□□ -0.28
LTBP1-208ENST00000422669 SAFB2Q14151 953 aaKnown RBP eCLIP13.28□□□□□ -0.28
LTBP1-208ENST00000422669 CFAP70Q5T0N1 1121 aa13.28□□□□□ -0.28
LTBP1-208ENST00000422669 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
LTBP1-208ENST00000422669 NRXN1Q9ULB1 1477 aa13.28□□□□□ -0.28
LTBP1-208ENST00000422669 UNC5CLQ8IV45 518 aa13.27□□□□□ -0.29
LTBP1-208ENST00000422669 CABLES1Q8TDN4 633 aa13.27□□□□□ -0.29
LTBP1-208ENST00000422669 C14orf93Q9H972 538 aaKnown RBP13.27□□□□□ -0.29
LTBP1-208ENST00000422669 TNS3Q68CZ2 1445 aa13.27□□□□□ -0.29
LTBP1-208ENST00000422669 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
LTBP1-208ENST00000422669 NWD2Q9ULI1 1742 aa13.26□□□□□ -0.29
LTBP1-208ENST00000422669 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
LTBP1-208ENST00000422669 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
LTBP1-208ENST00000422669 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
LTBP1-208ENST00000422669 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
LTBP1-208ENST00000422669 SIRT1Q96EB6 747 aa13.24□□□□□ -0.29
LTBP1-208ENST00000422669 PSME1Q06323 249 aa13.23□□□□□ -0.29
LTBP1-208ENST00000422669 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
LTBP1-208ENST00000422669 ADGRB2O60241 1585 aa13.23□□□□□ -0.29
LTBP1-208ENST00000422669 DLC1Q96QB1 1528 aa13.23□□□□□ -0.29
LTBP1-208ENST00000422669 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
LTBP1-208ENST00000422669 PMFBP1Q8TBY8 1022 aa13.22□□□□□ -0.29
LTBP1-208ENST00000422669 POGKQ9P215 609 aa13.22□□□□□ -0.29
LTBP1-208ENST00000422669 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
LTBP1-208ENST00000422669 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
LTBP1-208ENST00000422669 SBNO1A3KN83 1393 aa13.21□□□□□ -0.29
LTBP1-208ENST00000422669 ADGRB1O14514 1584 aa13.21□□□□□ -0.29
LTBP1-208ENST00000422669 SEPT12Q8IYM1 358 aa13.21□□□□□ -0.29
LTBP1-208ENST00000422669 NRAPQ86VF7 1730 aa13.21□□□□□ -0.3
LTBP1-208ENST00000422669 ALS2Q96Q42 1657 aa13.21□□□□□ -0.3
LTBP1-208ENST00000422669 ANKARQ7Z5J8 1434 aa13.21□□□□□ -0.3
LTBP1-208ENST00000422669 ARHGEF10O15013 1369 aa13.2□□□□□ -0.3
LTBP1-208ENST00000422669 VPS72Q15906 364 aa13.2□□□□□ -0.3
LTBP1-208ENST00000422669 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
LTBP1-208ENST00000422669 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
LTBP1-208ENST00000422669 TRAK1Q9UPV9 953 aa13.19□□□□□ -0.3
LTBP1-208ENST00000422669 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
LTBP1-208ENST00000422669 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
LTBP1-208ENST00000422669 CRYBG1Q9Y4K1 1723 aa13.18□□□□□ -0.3
LTBP1-208ENST00000422669 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
LTBP1-208ENST00000422669 A0A0G2JS52 829 aa13.17□□□□□ -0.3
LTBP1-208ENST00000422669 MYT1Q01538 1121 aa13.17□□□□□ -0.3
LTBP1-208ENST00000422669 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
LTBP1-208ENST00000422669 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
LTBP1-208ENST00000422669 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
LTBP1-208ENST00000422669 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
LTBP1-208ENST00000422669 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
LTBP1-208ENST00000422669 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
LTBP1-208ENST00000422669 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
LTBP1-208ENST00000422669 STAC3Q96MF2 364 aa13.15□□□□□ -0.3
LTBP1-208ENST00000422669 ITSN1Q15811 1721 aa13.15□□□□□ -0.3
LTBP1-208ENST00000422669 GPRASP1Q5JY77 1395 aa13.15□□□□□ -0.3
LTBP1-208ENST00000422669 FAM98CQ17RN3 349 aaKnown RBP13.14□□□□□ -0.31
LTBP1-208ENST00000422669 DCAF11Q8TEB1 546 aa13.14□□□□□ -0.31
LTBP1-208ENST00000422669 BTG4Q9NY30 223 aa13.14□□□□□ -0.31
LTBP1-208ENST00000422669 EIF3AQ14152 1382 aaKnown RBP13.14□□□□□ -0.31
LTBP1-208ENST00000422669 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
LTBP1-208ENST00000422669 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
LTBP1-208ENST00000422669 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
LTBP1-208ENST00000422669 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
LTBP1-208ENST00000422669 PHRF1Q9P1Y6 1649 aaKnown RBP13.12□□□□□ -0.31
LTBP1-208ENST00000422669 FAM182BQ5T319 152 aa13.11□□□□□ -0.31
LTBP1-208ENST00000422669 SIN3AQ96ST3 1273 aa13.11□□□□□ -0.31
LTBP1-208ENST00000422669 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
LTBP1-208ENST00000422669 ATP7BP35670 1465 aa13.1□□□□□ -0.31
LTBP1-208ENST00000422669 LRP5O75197 1615 aa13.1□□□□□ -0.31
LTBP1-208ENST00000422669 THSD7AQ9UPZ6 1657 aa13.1□□□□□ -0.31
LTBP1-208ENST00000422669 TNS1Q9HBL0 1735 aaKnown RBP13.1□□□□□ -0.31
LTBP1-208ENST00000422669 TONSLQ96HA7 1378 aa13.09□□□□□ -0.31
LTBP1-208ENST00000422669 PSDA5PKW4 1024 aaPredicted RBP13.09□□□□□ -0.31
LTBP1-208ENST00000422669 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
LTBP1-208ENST00000422669 SPATA31A5Q5VU36 1347 aa13.09□□□□□ -0.31
LTBP1-208ENST00000422669 SPATA31A7Q8IWB4 1347 aa13.09□□□□□ -0.31
LTBP1-208ENST00000422669 TOPAZ1Q8N9V7 1692 aa13.08□□□□□ -0.31
LTBP1-208ENST00000422669 BAG6P46379 1132 aa13.08□□□□□ -0.32
LTBP1-208ENST00000422669 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
LTBP1-208ENST00000422669 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
LTBP1-208ENST00000422669 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
LTBP1-208ENST00000422669 NUDT16Q96DE0 195 aaKnown RBP13.07□□□□□ -0.32
LTBP1-208ENST00000422669 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
LTBP1-208ENST00000422669 NUTM2GQ5VZR2 741 aa13.06□□□□□ -0.32
LTBP1-208ENST00000422669 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
LTBP1-208ENST00000422669 STRN4Q9NRL3 753 aa13.05□□□□□ -0.32
LTBP1-208ENST00000422669 NRKQ7Z2Y5 1582 aa13.04□□□□□ -0.32
LTBP1-208ENST00000422669 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
LTBP1-208ENST00000422669 CDK19Q9BWU1 502 aa13.04□□□□□ -0.32
LTBP1-208ENST00000422669 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
LTBP1-208ENST00000422669 TRPM1Q7Z4N2 1603 aa13.03□□□□□ -0.32
LTBP1-208ENST00000422669 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
LTBP1-208ENST00000422669 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
LTBP1-208ENST00000422669 ACEP12821 1306 aa13.03□□□□□ -0.32
LTBP1-208ENST00000422669 USP35Q9P2H5 1018 aa13.02□□□□□ -0.33
LTBP1-208ENST00000422669 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
LTBP1-208ENST00000422669 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms