RNA–Protein interactions for RNA: ENST00000422324.1

PPP1R9A-204, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 2

Gene PPP1R9A, Length 512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-204ENST00000422324 BCL9LQ86UU0 1499 aa38.32■■■■□ 3.72
PPP1R9A-204ENST00000422324 PAK3O75914 559 aaPredicted RBP38.31■■■■□ 3.72
PPP1R9A-204ENST00000422324 CRYBG1Q9Y4K1 1723 aa38.3■■■■□ 3.72
PPP1R9A-204ENST00000422324 SLIT2O94813 1529 aa38.29■■■■□ 3.72
PPP1R9A-204ENST00000422324 PLEKHG5O94827 1062 aa38.29■■■■□ 3.72
PPP1R9A-204ENST00000422324 ATRNO75882 1429 aa38.29■■■■□ 3.72
PPP1R9A-204ENST00000422324 RBM6P78332 1123 aaKnown RBP38.28■■■■□ 3.72
PPP1R9A-204ENST00000422324 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.27■■■■□ 3.72
PPP1R9A-204ENST00000422324 TRPC5Q9UL62 973 aaPredicted RBP38.27■■■■□ 3.72
PPP1R9A-204ENST00000422324 CABP1Q9NZU7 370 aa38.23■■■■□ 3.71
PPP1R9A-204ENST00000422324 TIMELESSQ9UNS1 1208 aa38.22■■■■□ 3.71
PPP1R9A-204ENST00000422324 PLCH1Q4KWH8 1693 aa38.22■■■■□ 3.71
PPP1R9A-204ENST00000422324 RGS12O14924 1447 aa38.21■■■■□ 3.71
PPP1R9A-204ENST00000422324 NWD2Q9ULI1 1742 aa38.19■■■■□ 3.7
PPP1R9A-204ENST00000422324 BRD4O60885 1362 aaPredicted RBP38.19■■■■□ 3.7
PPP1R9A-204ENST00000422324 ATAD2Q6PL18 1390 aa38.19■■■■□ 3.7
PPP1R9A-204ENST00000422324 UNC5CLQ8IV45 518 aa38.18■■■■□ 3.7
PPP1R9A-204ENST00000422324 PHRF1Q9P1Y6 1649 aaKnown RBP38.18■■■■□ 3.7
PPP1R9A-204ENST00000422324 USP6P35125 1406 aa38.17■■■■□ 3.7
PPP1R9A-204ENST00000422324 FAM83GA6ND36 823 aa38.13■■■■□ 3.69
PPP1R9A-204ENST00000422324 COL14A1Q05707 1796 aaKnown RBP38.13■■■■□ 3.69
PPP1R9A-204ENST00000422324 NUTM2GQ5VZR2 741 aa38.11■■■■□ 3.69
PPP1R9A-204ENST00000422324 ABTB2Q8N961 1025 aa38.11■■■■□ 3.69
PPP1R9A-204ENST00000422324 GJD4Q96KN9 370 aaPredicted RBP38.1■■■■□ 3.69
PPP1R9A-204ENST00000422324 AKAP12Q02952 1782 aa38.1■■■■□ 3.69
PPP1R9A-204ENST00000422324 SSH2Q76I76 1423 aa38.1■■■■□ 3.69
PPP1R9A-204ENST00000422324 NRAPQ86VF7 1730 aa38.09■■■■□ 3.69
PPP1R9A-204ENST00000422324 CCER1Q8TC90 406 aaPredicted RBP38.08■■■■□ 3.69
PPP1R9A-204ENST00000422324 GLI3P10071 1580 aa38.07■■■■□ 3.69
PPP1R9A-204ENST00000422324 NRKQ7Z2Y5 1582 aa38.07■■■■□ 3.69
PPP1R9A-204ENST00000422324 ST20-MTHFSA0A0A6YYL1 179 aa38.07■■■■□ 3.68
PPP1R9A-204ENST00000422324 TESK2Q96S53 571 aa38.06■■■■□ 3.68
PPP1R9A-204ENST00000422324 USP19O94966 1318 aa38.06■■■■□ 3.68
PPP1R9A-204ENST00000422324 CPSF1Q10570 1443 aaKnown RBP38.05■■■■□ 3.68
PPP1R9A-204ENST00000422324 ZNF692Q9BU19 519 aaPredicted RBP38.04■■■■□ 3.68
PPP1R9A-204ENST00000422324 VPS72Q15906 364 aa38.03■■■■□ 3.68
PPP1R9A-204ENST00000422324 KIAA0232Q92628 1395 aa38.03■■■■□ 3.68
PPP1R9A-204ENST00000422324 USP47Q96K76 1375 aa38.03■■■■□ 3.68
PPP1R9A-204ENST00000422324 NLRP13Q86W25 1043 aa38.02■■■■□ 3.68
PPP1R9A-204ENST00000422324 PRDM11Q9NQV5 511 aa38.02■■■■□ 3.68
PPP1R9A-204ENST00000422324 PIK3C2AO00443 1686 aa38.01■■■■□ 3.68
PPP1R9A-204ENST00000422324 PUS7Q96PZ0 661 aaKnown RBP38.01■■■■□ 3.68
PPP1R9A-204ENST00000422324 BTG4Q9NY30 223 aa38.01■■■■□ 3.68
PPP1R9A-204ENST00000422324 MON2Q7Z3U7 1717 aa38■■■■□ 3.67
PPP1R9A-204ENST00000422324 CD163L1Q9NR16 1453 aa37.97■■■■□ 3.67
PPP1R9A-204ENST00000422324 SLC24A1O60721 1099 aa37.97■■■■□ 3.67
PPP1R9A-204ENST00000422324 KTN1Q86UP2 1357 aaKnown RBP37.96■■■■□ 3.67
PPP1R9A-204ENST00000422324 TTC21BQ7Z4L5 1316 aa37.96■■■■□ 3.67
PPP1R9A-204ENST00000422324 SLIT3O75094 1523 aa37.96■■■■□ 3.67
PPP1R9A-204ENST00000422324 CPDO75976 1380 aa37.95■■■■□ 3.67
PPP1R9A-204ENST00000422324 ZC3H6P61129 1189 aaKnown RBP37.95■■■■□ 3.67
PPP1R9A-204ENST00000422324 NLRP6P59044 892 aa37.94■■■■□ 3.66
PPP1R9A-204ENST00000422324 TTC21AQ8NDW8 1320 aa37.93■■■■□ 3.66
PPP1R9A-204ENST00000422324 UPF1Q92900 1129 aaKnown RBP eCLIP37.93■■■■□ 3.66
PPP1R9A-204ENST00000422324 GCP02774 474 aa37.92■■■■□ 3.66
PPP1R9A-204ENST00000422324 CHRNA2Q15822 529 aa37.92■■■■□ 3.66
PPP1R9A-204ENST00000422324 TMC1Q8TDI8 760 aa37.92■■■■□ 3.66
PPP1R9A-204ENST00000422324 CCDC9Q9Y3X0 531 aaKnown RBP37.92■■■■□ 3.66
PPP1R9A-204ENST00000422324 SLC12A5Q9H2X9 1139 aa37.9■■■■□ 3.66
PPP1R9A-204ENST00000422324 LMO7Q8WWI1 1683 aa37.88■■■■□ 3.66
PPP1R9A-204ENST00000422324 NINLQ9Y2I6 1382 aa37.88■■■■□ 3.65
PPP1R9A-204ENST00000422324 HDGFL2Q7Z4V5 671 aaPredicted RBP37.85■■■■□ 3.65
PPP1R9A-204ENST00000422324 A0A1W2PP64 1363 aa37.84■■■■□ 3.65
PPP1R9A-204ENST00000422324 ONECUT3O60422 494 aaPredicted RBP37.84■■■■□ 3.65
PPP1R9A-204ENST00000422324 TMF1P82094 1093 aa37.84■■■■□ 3.65
PPP1R9A-204ENST00000422324 CAMTA1Q9Y6Y1 1673 aa37.83■■■■□ 3.65
PPP1R9A-204ENST00000422324 SPATA31A5Q5VU36 1347 aa37.83■■■■□ 3.65
PPP1R9A-204ENST00000422324 SPATA31A7Q8IWB4 1347 aa37.83■■■■□ 3.65
PPP1R9A-204ENST00000422324 TERF2IPQ9NYB0 399 aa37.82■■■■□ 3.64
PPP1R9A-204ENST00000422324 EDC4Q6P2E9 1401 aaKnown RBP37.81■■■■□ 3.64
PPP1R9A-204ENST00000422324 USP54Q70EL1 1684 aa37.81■■■■□ 3.64
PPP1R9A-204ENST00000422324 SEPT12Q8IYM1 358 aa37.8■■■■□ 3.64
PPP1R9A-204ENST00000422324 BRWD3Q6RI45 1802 aa37.79■■■■□ 3.64
PPP1R9A-204ENST00000422324 STRN4Q9NRL3 753 aa37.78■■■■□ 3.64
PPP1R9A-204ENST00000422324 USP31Q70CQ4 1352 aa37.78■■■■□ 3.64
PPP1R9A-204ENST00000422324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.77■■■■□ 3.64
PPP1R9A-204ENST00000422324 KCNH5Q8NCM2 988 aa37.76■■■■□ 3.64
PPP1R9A-204ENST00000422324 FAM98CQ17RN3 349 aaKnown RBP37.75■■■■□ 3.63
PPP1R9A-204ENST00000422324 AATKQ6ZMQ8 1374 aa37.75■■■■□ 3.63
PPP1R9A-204ENST00000422324 NFAT5O94916 1531 aa37.75■■■■□ 3.63
PPP1R9A-204ENST00000422324 SPATA31A1Q5TZJ5 1347 aa37.74■■■■□ 3.63
PPP1R9A-204ENST00000422324 COL5A2P05997 1499 aaPredicted RBP37.73■■■■□ 3.63
PPP1R9A-204ENST00000422324 NME9Q86XW9 330 aa37.73■■■■□ 3.63
PPP1R9A-204ENST00000422324 THSD7AQ9UPZ6 1657 aa37.72■■■■□ 3.63
PPP1R9A-204ENST00000422324 EVA1CP58658 441 aa37.72■■■■□ 3.63
PPP1R9A-204ENST00000422324 COL18A1P39060 1754 aa37.72■■■■□ 3.63
PPP1R9A-204ENST00000422324 CDCA8Q53HL2 280 aa37.71■■■■□ 3.63
PPP1R9A-204ENST00000422324 ZRANB1Q9UGI0 708 aa37.71■■■■□ 3.63
PPP1R9A-204ENST00000422324 ANKRD36BQ8N2N9 1353 aa37.7■■■■□ 3.63
PPP1R9A-204ENST00000422324 ZBTB7CA1YPR0 619 aa37.69■■■■□ 3.62
PPP1R9A-204ENST00000422324 A0A0G2JS52 829 aa37.68■■■■□ 3.62
PPP1R9A-204ENST00000422324 MYT1Q01538 1121 aa37.68■■■■□ 3.62
PPP1R9A-204ENST00000422324 ARHGEF25Q86VW2 580 aa37.68■■■■□ 3.62
PPP1R9A-204ENST00000422324 LARP1Q6PKG0 1096 aaKnown RBP37.67■■■■□ 3.62
PPP1R9A-204ENST00000422324 SOX12O15370 315 aa37.66■■■■□ 3.62
PPP1R9A-204ENST00000422324 OVOS2A0A0J9YW53 1432 aa37.65■■■■□ 3.62
PPP1R9A-204ENST00000422324 OVOS2Q6IE36 1432 aa37.65■■■■□ 3.62
PPP1R9A-204ENST00000422324 KRT27Q7Z3Y8 459 aa37.65■■■■□ 3.62
PPP1R9A-204ENST00000422324 EP400Q96L91 3159 aa37.64■■■■□ 3.62
PPP1R9A-204ENST00000422324 ABCC6O95255 1503 aa37.63■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms