RNA–Protein interactions for RNA: ENST00000422221.1

CLIC4P3-201, Transcript of chloride intracellular channel 4 pseudogene 3, humanhuman

BASIC

Gene CLIC4P3, Length 752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4P3-201ENST00000422221 TRIM52Q96A61 297 aa11.58□□□□□ -0.56
CLIC4P3-201ENST00000422221 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
CLIC4P3-201ENST00000422221 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
CLIC4P3-201ENST00000422221 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
CLIC4P3-201ENST00000422221 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
CLIC4P3-201ENST00000422221 RXRBP28702 533 aa11.55□□□□□ -0.56
CLIC4P3-201ENST00000422221 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
CLIC4P3-201ENST00000422221 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
CLIC4P3-201ENST00000422221 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
CLIC4P3-201ENST00000422221 E9PCH4 1651 aa11.55□□□□□ -0.56
CLIC4P3-201ENST00000422221 UNC13BO14795 1591 aa11.54□□□□□ -0.56
CLIC4P3-201ENST00000422221 DIP2AQ14689 1571 aa11.54□□□□□ -0.56
CLIC4P3-201ENST00000422221 SHPRHQ149N8 1683 aa11.53□□□□□ -0.56
CLIC4P3-201ENST00000422221 DDX17Q92841 729 aaKnown RBP11.53□□□□□ -0.56
CLIC4P3-201ENST00000422221 NUP155O75694 1391 aa11.53□□□□□ -0.56
CLIC4P3-201ENST00000422221 ROCK1Q13464 1354 aa11.53□□□□□ -0.56
CLIC4P3-201ENST00000422221 AFF2P51816 1311 aa11.52□□□□□ -0.57
CLIC4P3-201ENST00000422221 METP08581 1390 aa11.52□□□□□ -0.57
CLIC4P3-201ENST00000422221 SETD5Q9C0A6 1442 aa11.52□□□□□ -0.57
CLIC4P3-201ENST00000422221 TRPM2O94759 1503 aa11.51□□□□□ -0.57
CLIC4P3-201ENST00000422221 MST1RQ04912 1400 aa11.51□□□□□ -0.57
CLIC4P3-201ENST00000422221 IQGAP3Q86VI3 1631 aa11.5□□□□□ -0.57
CLIC4P3-201ENST00000422221 G3V3G9 751 aa11.5□□□□□ -0.57
CLIC4P3-201ENST00000422221 LRRC59Q96AG4 307 aaKnown RBP11.5□□□□□ -0.57
CLIC4P3-201ENST00000422221 DCCP43146 1447 aa11.5□□□□□ -0.57
CLIC4P3-201ENST00000422221 ASXL1Q8IXJ9 1541 aa11.5□□□□□ -0.57
CLIC4P3-201ENST00000422221 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
CLIC4P3-201ENST00000422221 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
CLIC4P3-201ENST00000422221 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
CLIC4P3-201ENST00000422221 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
CLIC4P3-201ENST00000422221 CDK12Q9NYV4 1490 aaPredicted RBP11.49□□□□□ -0.57
CLIC4P3-201ENST00000422221 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
CLIC4P3-201ENST00000422221 ERBB3P21860 1342 aa11.48□□□□□ -0.57
CLIC4P3-201ENST00000422221 XRN1Q8IZH2 1706 aaKnown RBP11.47□□□□□ -0.57
CLIC4P3-201ENST00000422221 SETBP1Q9Y6X0 1596 aa11.47□□□□□ -0.57
CLIC4P3-201ENST00000422221 PNPLA6Q8IY17 1366 aa11.47□□□□□ -0.57
CLIC4P3-201ENST00000422221 ITGAEP38570 1179 aa11.47□□□□□ -0.57
CLIC4P3-201ENST00000422221 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
CLIC4P3-201ENST00000422221 MS4A4AQ96JQ5 239 aa11.47□□□□□ -0.57
CLIC4P3-201ENST00000422221 C8orf37Q96NL8 207 aa11.47□□□□□ -0.57
CLIC4P3-201ENST00000422221 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.57
CLIC4P3-201ENST00000422221 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.58
CLIC4P3-201ENST00000422221 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
CLIC4P3-201ENST00000422221 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
CLIC4P3-201ENST00000422221 EP400Q96L91 3159 aa11.45□□□□□ -0.58
CLIC4P3-201ENST00000422221 RGS12O14924 1447 aa11.44□□□□□ -0.58
CLIC4P3-201ENST00000422221 ADGRL3Q9HAR2 1447 aa11.44□□□□□ -0.58
CLIC4P3-201ENST00000422221 ADAMTS2O95450 1211 aa11.44□□□□□ -0.58
CLIC4P3-201ENST00000422221 ORAI2Q96SN7 254 aa11.44□□□□□ -0.58
CLIC4P3-201ENST00000422221 PPARGC1BQ86YN6 1023 aaKnown RBP11.43□□□□□ -0.58
CLIC4P3-201ENST00000422221 NGLY1Q96IV0 654 aa11.43□□□□□ -0.58
CLIC4P3-201ENST00000422221 C1orf167Q5SNV9 1468 aa11.43□□□□□ -0.58
CLIC4P3-201ENST00000422221 SOS2Q07890 1332 aaPredicted RBP11.42□□□□□ -0.58
CLIC4P3-201ENST00000422221 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
CLIC4P3-201ENST00000422221 NEXMIFQ5QGS0 1516 aa11.41□□□□□ -0.58
CLIC4P3-201ENST00000422221 FNBP4Q8N3X1 1017 aaPredicted RBP11.41□□□□□ -0.58
CLIC4P3-201ENST00000422221 ROBO2Q9HCK4 1378 aa11.41□□□□□ -0.58
CLIC4P3-201ENST00000422221 SPHKAPQ2M3C7 1700 aa11.4□□□□□ -0.58
CLIC4P3-201ENST00000422221 USP21Q9UK80 565 aa11.4□□□□□ -0.58
CLIC4P3-201ENST00000422221 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
CLIC4P3-201ENST00000422221 CLTCL1P53675 1640 aa11.39□□□□□ -0.59
CLIC4P3-201ENST00000422221 RNF166Q96A37 237 aaPredicted RBP11.39□□□□□ -0.59
CLIC4P3-201ENST00000422221 LAMC1P11047 1609 aa11.38□□□□□ -0.59
CLIC4P3-201ENST00000422221 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
CLIC4P3-201ENST00000422221 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
CLIC4P3-201ENST00000422221 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
CLIC4P3-201ENST00000422221 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
CLIC4P3-201ENST00000422221 TRPC5Q9UL62 973 aaPredicted RBP11.37□□□□□ -0.59
CLIC4P3-201ENST00000422221 PTCH1Q13635 1447 aa11.36□□□□□ -0.59
CLIC4P3-201ENST00000422221 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.36□□□□□ -0.59
CLIC4P3-201ENST00000422221 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
CLIC4P3-201ENST00000422221 ZFP91Q96JP5 570 aaPredicted RBP11.36□□□□□ -0.59
CLIC4P3-201ENST00000422221 ATRNO75882 1429 aa11.35□□□□□ -0.59
CLIC4P3-201ENST00000422221 SOX12O15370 315 aa11.35□□□□□ -0.59
CLIC4P3-201ENST00000422221 ATAD2Q6PL18 1390 aa11.35□□□□□ -0.59
CLIC4P3-201ENST00000422221 NAIPQ13075 1403 aa11.35□□□□□ -0.59
CLIC4P3-201ENST00000422221 PRAG1Q86YV5 1406 aa11.35□□□□□ -0.59
CLIC4P3-201ENST00000422221 RPGRIP1LQ68CZ1 1315 aa11.35□□□□□ -0.59
CLIC4P3-201ENST00000422221 BCL9LQ86UU0 1499 aa11.34□□□□□ -0.59
CLIC4P3-201ENST00000422221 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
CLIC4P3-201ENST00000422221 ESCO1Q5FWF5 840 aa11.34□□□□□ -0.59
CLIC4P3-201ENST00000422221 FOXO3O43524 673 aa11.33□□□□□ -0.6
CLIC4P3-201ENST00000422221 XPCQ01831 940 aaPredicted RBP11.33□□□□□ -0.6
CLIC4P3-201ENST00000422221 HFM1A2PYH4 1435 aa11.33□□□□□ -0.6
CLIC4P3-201ENST00000422221 KIF1BO60333 1816 aa11.32□□□□□ -0.6
CLIC4P3-201ENST00000422221 MYOM2P54296 1465 aa11.32□□□□□ -0.6
CLIC4P3-201ENST00000422221 WAPLQ7Z5K2 1190 aa11.32□□□□□ -0.6
CLIC4P3-201ENST00000422221 COL22A1Q8NFW1 1626 aaPredicted RBP11.31□□□□□ -0.6
CLIC4P3-201ENST00000422221 KHSRPQ92945 711 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLIC4P3-201ENST00000422221 GJD4Q96KN9 370 aaPredicted RBP11.31□□□□□ -0.6
CLIC4P3-201ENST00000422221 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
CLIC4P3-201ENST00000422221 ADGRF5Q8IZF2 1346 aa11.31□□□□□ -0.6
CLIC4P3-201ENST00000422221 PXDNQ92626 1479 aa11.31□□□□□ -0.6
CLIC4P3-201ENST00000422221 NUTM2FA1L443 756 aa11.3□□□□□ -0.6
CLIC4P3-201ENST00000422221 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
CLIC4P3-201ENST00000422221 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
CLIC4P3-201ENST00000422221 RRBP1Q9P2E9 1410 aaKnown RBP11.29□□□□□ -0.6
CLIC4P3-201ENST00000422221 STK26Q9P289 416 aa11.29□□□□□ -0.6
CLIC4P3-201ENST00000422221 TMEM132EQ6IEE7 984 aa11.28□□□□□ -0.6
CLIC4P3-201ENST00000422221 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms