RNA–Protein interactions for RNA: ENST00000421832.2

CTU1-201, Transcript of cytosolic thiouridylase subunit 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTU1, Length 2,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU1-201ENST00000421832 ANKRD26Q9UPS8 1709 aa32.82■■■□□ 2.84
CTU1-201ENST00000421832 PPP2R1AP30153 589 aa32.81■■■□□ 2.84
CTU1-201ENST00000421832 USP6P35125 1406 aa32.81■■■□□ 2.84
CTU1-201ENST00000421832 NGDNQ8NEJ9 315 aaKnown RBP32.81■■■□□ 2.84
CTU1-201ENST00000421832 NSD2O96028 1365 aa32.8■■■□□ 2.84
CTU1-201ENST00000421832 MORC1Q86VD1 984 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 NLRP13Q86W25 1043 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 DCCP43146 1447 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 ESCO1Q5FWF5 840 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 PHF8Q9UPP1 1060 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 ORAI2Q96SN7 254 aa32.78■■■□□ 2.84
CTU1-201ENST00000421832 TNNT2P45379 298 aaPredicted RBP32.78■■■□□ 2.84
CTU1-201ENST00000421832 C1orf167Q5SNV9 1468 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 ATF3P18847 181 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 NME9Q86XW9 330 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 BRD4O60885 1362 aaPredicted RBP32.77■■■□□ 2.84
CTU1-201ENST00000421832 MSH6P52701 1360 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 MST1RQ04912 1400 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 SSH2Q76I76 1423 aa32.76■■■□□ 2.83
CTU1-201ENST00000421832 ZRANB1Q9UGI0 708 aa32.75■■■□□ 2.83
CTU1-201ENST00000421832 TTC21BQ7Z4L5 1316 aa32.74■■■□□ 2.83
CTU1-201ENST00000421832 AEBP2Q6ZN18 517 aaPredicted RBP32.73■■■□□ 2.83
CTU1-201ENST00000421832 CADPS2Q86UW7 1296 aa32.71■■■□□ 2.83
CTU1-201ENST00000421832 LTBP4Q8N2S1 1624 aa32.68■■■□□ 2.82
CTU1-201ENST00000421832 MSH5O43196 834 aa32.68■■■□□ 2.82
CTU1-201ENST00000421832 FAM9BQ8IZU0 186 aa32.68■■■□□ 2.82
CTU1-201ENST00000421832 PNISRQ8TF01 805 aaKnown RBP32.65■■■□□ 2.82
CTU1-201ENST00000421832 PIK3C2AO00443 1686 aa32.65■■■□□ 2.82
CTU1-201ENST00000421832 KIF1AQ12756 1690 aa32.64■■■□□ 2.82
CTU1-201ENST00000421832 FOXO3O43524 673 aa32.64■■■□□ 2.82
CTU1-201ENST00000421832 FBLN1P23142 703 aa32.63■■■□□ 2.81
CTU1-201ENST00000421832 TTC21AQ8NDW8 1320 aa32.61■■■□□ 2.81
CTU1-201ENST00000421832 XPCQ01831 940 aaPredicted RBP32.61■■■□□ 2.81
CTU1-201ENST00000421832 PSME1Q06323 249 aa32.6■■■□□ 2.81
CTU1-201ENST00000421832 COG3Q96JB2 828 aa32.6■■■□□ 2.81
CTU1-201ENST00000421832 OVOS2A0A0J9YW53 1432 aa32.6■■■□□ 2.81
CTU1-201ENST00000421832 OVOS2Q6IE36 1432 aa32.6■■■□□ 2.81
CTU1-201ENST00000421832 MTHFSP49914 203 aa32.58■■■□□ 2.81
CTU1-201ENST00000421832 MAP2P11137 1827 aaKnown RBP32.57■■■□□ 2.81
CTU1-201ENST00000421832 PAK3O75914 559 aaPredicted RBP32.57■■■□□ 2.8
CTU1-201ENST00000421832 DDX17Q92841 729 aaKnown RBP32.57■■■□□ 2.8
CTU1-201ENST00000421832 MARF1Q9Y4F3 1742 aaKnown RBP32.57■■■□□ 2.8
CTU1-201ENST00000421832 SLAIN2Q9P270 581 aa32.55■■■□□ 2.8
CTU1-201ENST00000421832 TRPM3Q9HCF6 1732 aaPredicted RBP32.55■■■□□ 2.8
CTU1-201ENST00000421832 NUTM2GQ5VZR2 741 aa32.54■■■□□ 2.8
CTU1-201ENST00000421832 BRINP3Q76B58 766 aa32.52■■■□□ 2.8
CTU1-201ENST00000421832 USP31Q70CQ4 1352 aa32.51■■■□□ 2.8
CTU1-201ENST00000421832 ABTB2Q8N961 1025 aa32.51■■■□□ 2.8
CTU1-201ENST00000421832 ERICH6BQ5W0A0 696 aa32.5■■■□□ 2.79
CTU1-201ENST00000421832 KRT28Q7Z3Y7 464 aa32.5■■■□□ 2.79
CTU1-201ENST00000421832 USP54Q70EL1 1684 aa32.49■■■□□ 2.79
CTU1-201ENST00000421832 NLRP6P59044 892 aa32.49■■■□□ 2.79
CTU1-201ENST00000421832 POLKQ9UBT6 870 aa32.49■■■□□ 2.79
CTU1-201ENST00000421832 ERICH6Q7L0X2 663 aa32.49■■■□□ 2.79
CTU1-201ENST00000421832 SHPRHQ149N8 1683 aa32.48■■■□□ 2.79
CTU1-201ENST00000421832 EMILIN1Q9Y6C2 1016 aa32.47■■■□□ 2.79
CTU1-201ENST00000421832 AATKQ6ZMQ8 1374 aa32.47■■■□□ 2.79
CTU1-201ENST00000421832 RRS1Q15050 365 aaKnown RBP32.46■■■□□ 2.79
CTU1-201ENST00000421832 SOX12O15370 315 aa32.46■■■□□ 2.79
CTU1-201ENST00000421832 COL3A1P02461 1466 aaPredicted RBP32.43■■■□□ 2.78
CTU1-201ENST00000421832 PXDNQ92626 1479 aa32.43■■■□□ 2.78
CTU1-201ENST00000421832 NPHP3Q7Z494 1330 aa32.43■■■□□ 2.78
CTU1-201ENST00000421832 PPM1GO15355 546 aaPredicted RBP32.42■■■□□ 2.78
CTU1-201ENST00000421832 HNRNPUQ00839 825 aaKnown RBP eCLIP32.42■■■□□ 2.78
CTU1-201ENST00000421832 ADAMTS8Q9UP79 889 aa32.42■■■□□ 2.78
CTU1-201ENST00000421832 ALS2Q96Q42 1657 aa32.42■■■□□ 2.78
CTU1-201ENST00000421832 SMG6Q86US8 1419 aaKnown RBP32.41■■■□□ 2.78
CTU1-201ENST00000421832 SENP3-EIF4A1A0A087X0R7 540 aa32.4■■■□□ 2.78
CTU1-201ENST00000421832 CFAP53Q96M91 514 aa32.4■■■□□ 2.78
CTU1-201ENST00000421832 LMOD2Q6P5Q4 547 aa32.39■■■□□ 2.78
CTU1-201ENST00000421832 PNPLA6Q8IY17 1366 aa32.39■■■□□ 2.78
CTU1-201ENST00000421832 WDR43Q15061 677 aaKnown RBP eCLIP32.39■■■□□ 2.78
CTU1-201ENST00000421832 PEAK1Q9H792 1746 aa32.38■■■□□ 2.77
CTU1-201ENST00000421832 PLEKHG5O94827 1062 aa32.35■■■□□ 2.77
CTU1-201ENST00000421832 CDK12Q9NYV4 1490 aaPredicted RBP32.35■■■□□ 2.77
CTU1-201ENST00000421832 SBNO1A3KN83 1393 aa32.34■■■□□ 2.77
CTU1-201ENST00000421832 NHSL1Q5SYE7 1610 aa32.34■■■□□ 2.77
CTU1-201ENST00000421832 ROBO1Q9Y6N7 1651 aa32.33■■■□□ 2.77
CTU1-201ENST00000421832 INSRP06213 1382 aa32.33■■■□□ 2.77
CTU1-201ENST00000421832 BLMP54132 1417 aaPredicted RBP32.33■■■□□ 2.77
CTU1-201ENST00000421832 MAP3K19Q56UN5 1328 aa32.32■■■□□ 2.77
CTU1-201ENST00000421832 TNS3Q68CZ2 1445 aa32.32■■■□□ 2.76
CTU1-201ENST00000421832 NFAT5O94916 1531 aa32.31■■■□□ 2.76
CTU1-201ENST00000421832 SOS2Q07890 1332 aaPredicted RBP32.3■■■□□ 2.76
CTU1-201ENST00000421832 SPATA31A3Q5VYP0 1347 aa32.29■■■□□ 2.76
CTU1-201ENST00000421832 SLIT3O75094 1523 aa32.29■■■□□ 2.76
CTU1-201ENST00000421832 LTN1O94822 1766 aa32.29■■■□□ 2.76
CTU1-201ENST00000421832 MED1Q15648 1581 aaPredicted RBP32.28■■■□□ 2.76
CTU1-201ENST00000421832 DIAPH1O60610 1272 aaKnown RBP32.28■■■□□ 2.76
CTU1-201ENST00000421832 USP19O94966 1318 aa32.28■■■□□ 2.76
CTU1-201ENST00000421832 CCDC146Q8IYE0 955 aa32.26■■■□□ 2.75
CTU1-201ENST00000421832 HSP90AB2PQ58FF8 381 aa32.25■■■□□ 2.75
CTU1-201ENST00000421832 U2SURPO15042 1029 aaKnown RBP32.24■■■□□ 2.75
CTU1-201ENST00000421832 GCP02774 474 aa32.23■■■□□ 2.75
CTU1-201ENST00000421832 U2AF1L5P0DN76 240 aaPredicted RBP32.23■■■□□ 2.75
CTU1-201ENST00000421832 U2AF1Q01081 240 aaKnown RBP eCLIP32.23■■■□□ 2.75
CTU1-201ENST00000421832 CRYBG1Q9Y4K1 1723 aa32.22■■■□□ 2.75
CTU1-201ENST00000421832 IL13P35225 146 aa32.22■■■□□ 2.75
CTU1-201ENST00000421832 PHRF1Q9P1Y6 1649 aaKnown RBP32.21■■■□□ 2.75
CTU1-201ENST00000421832 KCNH5Q8NCM2 988 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms