RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 C11orf95C9JLR9 678 aaPredicted RBP13.89□□□□□ -0.19
TRIM39-206ENST00000420746 RGPD3A6NKT7 1758 aaPredicted RBP13.88□□□□□ -0.19
TRIM39-206ENST00000420746 RGPD4Q7Z3J3 1758 aa13.88□□□□□ -0.19
TRIM39-206ENST00000420746 PLEKHH1Q9ULM0 1364 aa13.88□□□□□ -0.19
TRIM39-206ENST00000420746 PPLO60437 1756 aa13.87□□□□□ -0.19
TRIM39-206ENST00000420746 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
TRIM39-206ENST00000420746 PTGER2P43116 358 aa13.87□□□□□ -0.19
TRIM39-206ENST00000420746 BARGINQ6ZT62 677 aa13.87□□□□□ -0.19
TRIM39-206ENST00000420746 SIRT1Q96EB6 747 aa13.87□□□□□ -0.19
TRIM39-206ENST00000420746 SYT17Q9BSW7 474 aa13.87□□□□□ -0.19
TRIM39-206ENST00000420746 MYOM1P52179 1685 aa13.86□□□□□ -0.19
TRIM39-206ENST00000420746 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
TRIM39-206ENST00000420746 PLSCR1O15162 318 aa13.85□□□□□ -0.19
TRIM39-206ENST00000420746 ALS2Q96Q42 1657 aa13.85□□□□□ -0.19
TRIM39-206ENST00000420746 DLC1Q96QB1 1528 aa13.85□□□□□ -0.19
TRIM39-206ENST00000420746 TRPM3Q9HCF6 1732 aaPredicted RBP13.84□□□□□ -0.19
TRIM39-206ENST00000420746 ANKARQ7Z5J8 1434 aa13.84□□□□□ -0.19
TRIM39-206ENST00000420746 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
TRIM39-206ENST00000420746 PRDM11Q9NQV5 511 aa13.84□□□□□ -0.19
TRIM39-206ENST00000420746 STK26Q9P289 416 aa13.84□□□□□ -0.19
TRIM39-206ENST00000420746 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
TRIM39-206ENST00000420746 MAP3K5Q99683 1374 aa13.83□□□□□ -0.19
TRIM39-206ENST00000420746 ANO8Q9HCE9 1232 aaPredicted RBP13.83□□□□□ -0.2
TRIM39-206ENST00000420746 CRYBG1Q9Y4K1 1723 aa13.82□□□□□ -0.2
TRIM39-206ENST00000420746 ZBTB7AO95365 584 aa13.81□□□□□ -0.2
TRIM39-206ENST00000420746 GPRASP1Q5JY77 1395 aa13.81□□□□□ -0.2
TRIM39-206ENST00000420746 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-206ENST00000420746 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
TRIM39-206ENST00000420746 SGIP1Q9BQI5 828 aa13.79□□□□□ -0.2
TRIM39-206ENST00000420746 ADGRF5Q8IZF2 1346 aa13.79□□□□□ -0.2
TRIM39-206ENST00000420746 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-206ENST00000420746 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
TRIM39-206ENST00000420746 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
TRIM39-206ENST00000420746 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
TRIM39-206ENST00000420746 ANKRD30BQ9BXX2 1392 aa13.78□□□□□ -0.2
TRIM39-206ENST00000420746 OVOS2A0A0G2JMS6 1433 aa13.78□□□□□ -0.2
TRIM39-206ENST00000420746 OVOS2A0A0J9YW53 1432 aa13.78□□□□□ -0.2
TRIM39-206ENST00000420746 OVOS2Q6IE36 1432 aa13.78□□□□□ -0.2
TRIM39-206ENST00000420746 SSH2Q76I76 1423 aa13.78□□□□□ -0.2
TRIM39-206ENST00000420746 PIK3C2GO75747 1445 aa13.77□□□□□ -0.21
TRIM39-206ENST00000420746 TCP11L2Q8N4U5 519 aa13.77□□□□□ -0.21
TRIM39-206ENST00000420746 PMFBP1Q8TBY8 1022 aa13.77□□□□□ -0.21
TRIM39-206ENST00000420746 STRN4Q9NRL3 753 aa13.77□□□□□ -0.21
TRIM39-206ENST00000420746 ACIN1Q9UKV3 1341 aaKnown RBP13.77□□□□□ -0.21
TRIM39-206ENST00000420746 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
TRIM39-206ENST00000420746 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
TRIM39-206ENST00000420746 SHANK3Q9BYB0 1731 aa13.76□□□□□ -0.21
TRIM39-206ENST00000420746 PARP4Q9UKK3 1724 aaKnown RBP13.76□□□□□ -0.21
TRIM39-206ENST00000420746 DHX57Q6P158 1386 aaKnown RBP13.75□□□□□ -0.21
TRIM39-206ENST00000420746 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
TRIM39-206ENST00000420746 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
TRIM39-206ENST00000420746 PEAK1Q9H792 1746 aa13.75□□□□□ -0.21
TRIM39-206ENST00000420746 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
TRIM39-206ENST00000420746 ARXQ96QS3 562 aa13.74□□□□□ -0.21
TRIM39-206ENST00000420746 HSPA6P17066 643 aa13.73□□□□□ -0.21
TRIM39-206ENST00000420746 CHRNA2Q15822 529 aa13.73□□□□□ -0.21
TRIM39-206ENST00000420746 GPR162Q16538 588 aa13.73□□□□□ -0.21
TRIM39-206ENST00000420746 STK32BQ9NY57 414 aa13.73□□□□□ -0.21
TRIM39-206ENST00000420746 BCL9O00512 1426 aa13.73□□□□□ -0.21
TRIM39-206ENST00000420746 EVA1CP58658 441 aa13.72□□□□□ -0.21
TRIM39-206ENST00000420746 SLC15A2Q16348 729 aa13.72□□□□□ -0.21
TRIM39-206ENST00000420746 PROM2Q8N271 834 aa13.72□□□□□ -0.21
TRIM39-206ENST00000420746 ATP7BP35670 1465 aa13.72□□□□□ -0.21
TRIM39-206ENST00000420746 GOLGB1Q14789 3259 aaKnown RBP13.72□□□□□ -0.21
TRIM39-206ENST00000420746 AATKQ6ZMQ8 1374 aa13.71□□□□□ -0.21
TRIM39-206ENST00000420746 LARP1Q6PKG0 1096 aaKnown RBP13.71□□□□□ -0.21
TRIM39-206ENST00000420746 PHRF1Q9P1Y6 1649 aaKnown RBP13.71□□□□□ -0.22
TRIM39-206ENST00000420746 SPATA31E1Q6ZUB1 1445 aa13.7□□□□□ -0.22
TRIM39-206ENST00000420746 CPDO75976 1380 aa13.7□□□□□ -0.22
TRIM39-206ENST00000420746 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
TRIM39-206ENST00000420746 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
TRIM39-206ENST00000420746 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
TRIM39-206ENST00000420746 TXNRD1Q16881 649 aa13.68□□□□□ -0.22
TRIM39-206ENST00000420746 SBF2Q86WG5 1849 aa13.68□□□□□ -0.22
TRIM39-206ENST00000420746 LMO7Q8WWI1 1683 aa13.68□□□□□ -0.22
TRIM39-206ENST00000420746 LOC105371045A0A1W2PR82 267 aa13.67□□□□□ -0.22
TRIM39-206ENST00000420746 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
TRIM39-206ENST00000420746 C14orf93Q9H972 538 aaKnown RBP13.67□□□□□ -0.22
TRIM39-206ENST00000420746 NGDNQ8NEJ9 315 aaKnown RBP13.66□□□□□ -0.22
TRIM39-206ENST00000420746 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
TRIM39-206ENST00000420746 LRRC37A3O60309 1634 aa13.65□□□□□ -0.22
TRIM39-206ENST00000420746 CRB1P82279 1406 aa13.64□□□□□ -0.23
TRIM39-206ENST00000420746 COL5A2P05997 1499 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-206ENST00000420746 GRIN3BO60391 1043 aa13.64□□□□□ -0.23
TRIM39-206ENST00000420746 ITGAEP38570 1179 aa13.64□□□□□ -0.23
TRIM39-206ENST00000420746 SAFB2Q14151 953 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM39-206ENST00000420746 DDB1Q16531 1140 aa13.64□□□□□ -0.23
TRIM39-206ENST00000420746 PTF1AQ7RTS3 328 aa13.64□□□□□ -0.23
TRIM39-206ENST00000420746 POGKQ9P215 609 aa13.64□□□□□ -0.23
TRIM39-206ENST00000420746 ATP10DQ9P241 1426 aa13.64□□□□□ -0.23
TRIM39-206ENST00000420746 RGL3Q3MIN7 710 aa13.63□□□□□ -0.23
TRIM39-206ENST00000420746 SLC4A1APQ9BWU0 796 aaKnown RBP13.62□□□□□ -0.23
TRIM39-206ENST00000420746 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
TRIM39-206ENST00000420746 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
TRIM39-206ENST00000420746 SLC16A10Q8TF71 515 aa13.61□□□□□ -0.23
TRIM39-206ENST00000420746 USP19O94966 1318 aa13.61□□□□□ -0.23
TRIM39-206ENST00000420746 PAPPAQ13219 1627 aa13.61□□□□□ -0.23
TRIM39-206ENST00000420746 CDCA7Q9BWT1 371 aaPredicted RBP13.6□□□□□ -0.23
TRIM39-206ENST00000420746 ADCY9O60503 1353 aa13.59□□□□□ -0.23
TRIM39-206ENST00000420746 POLD1P28340 1107 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms