RNA–Protein interactions for RNA: ENST00000420369.5

NR1H3-207, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-207ENST00000420369 SSH2Q76I76 1423 aa25.79■■□□□ 1.72
NR1H3-207ENST00000420369 MARF1Q9Y4F3 1742 aaKnown RBP25.77■■□□□ 1.72
NR1H3-207ENST00000420369 RALBP1Q15311 655 aa25.77■■□□□ 1.72
NR1H3-207ENST00000420369 MIER1Q8N108 512 aa25.77■■□□□ 1.72
NR1H3-207ENST00000420369 SLAIN2Q9P270 581 aa25.77■■□□□ 1.72
NR1H3-207ENST00000420369 TTC21AQ8NDW8 1320 aa25.77■■□□□ 1.72
NR1H3-207ENST00000420369 ALS2Q96Q42 1657 aa25.77■■□□□ 1.72
NR1H3-207ENST00000420369 TTC21BQ7Z4L5 1316 aa25.75■■□□□ 1.71
NR1H3-207ENST00000420369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.75■■□□□ 1.71
NR1H3-207ENST00000420369 NPHP3Q7Z494 1330 aa25.73■■□□□ 1.71
NR1H3-207ENST00000420369 BRINP3Q76B58 766 aa25.73■■□□□ 1.71
NR1H3-207ENST00000420369 MAP2P11137 1827 aaKnown RBP25.72■■□□□ 1.71
NR1H3-207ENST00000420369 PSME1Q06323 249 aa25.72■■□□□ 1.71
NR1H3-207ENST00000420369 PXDNQ92626 1479 aa25.72■■□□□ 1.71
NR1H3-207ENST00000420369 FOXO3O43524 673 aa25.71■■□□□ 1.71
NR1H3-207ENST00000420369 AHDC1Q5TGY3 1603 aaPredicted RBP25.7■■□□□ 1.71
NR1H3-207ENST00000420369 MYBBP1AQ9BQG0 1328 aaKnown RBP25.7■■□□□ 1.71
NR1H3-207ENST00000420369 FYB1O15117 783 aa25.7■■□□□ 1.7
NR1H3-207ENST00000420369 OVOS2A0A0J9YW53 1432 aa25.7■■□□□ 1.7
NR1H3-207ENST00000420369 OVOS2Q6IE36 1432 aa25.7■■□□□ 1.7
NR1H3-207ENST00000420369 MORC1Q86VD1 984 aa25.69■■□□□ 1.7
NR1H3-207ENST00000420369 GGNBP2Q9H3C7 697 aa25.69■■□□□ 1.7
NR1H3-207ENST00000420369 NME9Q86XW9 330 aa25.68■■□□□ 1.7
NR1H3-207ENST00000420369 PHLPP1O60346 1717 aa25.67■■□□□ 1.7
NR1H3-207ENST00000420369 CCER2I3L3R5 266 aa25.66■■□□□ 1.7
NR1H3-207ENST00000420369 TOM1O60784 492 aa25.66■■□□□ 1.7
NR1H3-207ENST00000420369 PAK3O75914 559 aaPredicted RBP25.66■■□□□ 1.7
NR1H3-207ENST00000420369 KRT28Q7Z3Y7 464 aa25.66■■□□□ 1.7
NR1H3-207ENST00000420369 SBNO1A3KN83 1393 aa25.66■■□□□ 1.7
NR1H3-207ENST00000420369 USP31Q70CQ4 1352 aa25.66■■□□□ 1.7
NR1H3-207ENST00000420369 TNS3Q68CZ2 1445 aa25.65■■□□□ 1.7
NR1H3-207ENST00000420369 CERKQ8TCT0 537 aa25.65■■□□□ 1.7
NR1H3-207ENST00000420369 COG3Q96JB2 828 aa25.65■■□□□ 1.7
NR1H3-207ENST00000420369 PHRF1Q9P1Y6 1649 aaKnown RBP25.64■■□□□ 1.7
NR1H3-207ENST00000420369 CRYBG1Q9Y4K1 1723 aa25.64■■□□□ 1.7
NR1H3-207ENST00000420369 XPCQ01831 940 aaPredicted RBP25.63■■□□□ 1.69
NR1H3-207ENST00000420369 LTN1O94822 1766 aa25.63■■□□□ 1.69
NR1H3-207ENST00000420369 MED1Q15648 1581 aaPredicted RBP25.62■■□□□ 1.69
NR1H3-207ENST00000420369 NLRP13Q86W25 1043 aa25.62■■□□□ 1.69
NR1H3-207ENST00000420369 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
NR1H3-207ENST00000420369 ABCA3Q99758 1704 aa25.61■■□□□ 1.69
NR1H3-207ENST00000420369 ABTB2Q8N961 1025 aa25.6■■□□□ 1.69
NR1H3-207ENST00000420369 SLIT3O75094 1523 aa25.59■■□□□ 1.69
NR1H3-207ENST00000420369 UBAP1LF5GYI3 381 aa25.59■■□□□ 1.69
NR1H3-207ENST00000420369 PPP2R1AP30153 589 aa25.59■■□□□ 1.69
NR1H3-207ENST00000420369 DDX17Q92841 729 aaKnown RBP25.59■■□□□ 1.69
NR1H3-207ENST00000420369 SOS2Q07890 1332 aaPredicted RBP25.59■■□□□ 1.69
NR1H3-207ENST00000420369 ARHGEF10O15013 1369 aa25.58■■□□□ 1.69
NR1H3-207ENST00000420369 ZRANB1Q9UGI0 708 aa25.58■■□□□ 1.69
NR1H3-207ENST00000420369 COL16A1Q07092 1604 aaPredicted RBP25.58■■□□□ 1.69
NR1H3-207ENST00000420369 TNNT2P45379 298 aaPredicted RBP25.57■■□□□ 1.68
NR1H3-207ENST00000420369 NLRP6P59044 892 aa25.57■■□□□ 1.68
NR1H3-207ENST00000420369 AATKQ6ZMQ8 1374 aa25.56■■□□□ 1.68
NR1H3-207ENST00000420369 SMG6Q86US8 1419 aaKnown RBP25.54■■□□□ 1.68
NR1H3-207ENST00000420369 NFAT5O94916 1531 aa25.54■■□□□ 1.68
NR1H3-207ENST00000420369 LMOD2Q6P5Q4 547 aa25.54■■□□□ 1.68
NR1H3-207ENST00000420369 MRS2Q9HD23 443 aa25.54■■□□□ 1.68
NR1H3-207ENST00000420369 SPATA31A3Q5VYP0 1347 aa25.54■■□□□ 1.68
NR1H3-207ENST00000420369 COL22A1Q8NFW1 1626 aaPredicted RBP25.52■■□□□ 1.68
NR1H3-207ENST00000420369 NUTM2GQ5VZR2 741 aa25.52■■□□□ 1.68
NR1H3-207ENST00000420369 CDK12Q9NYV4 1490 aaPredicted RBP25.52■■□□□ 1.68
NR1H3-207ENST00000420369 SHPRHQ149N8 1683 aa25.52■■□□□ 1.68
NR1H3-207ENST00000420369 PIP4K2BP78356 416 aa25.51■■□□□ 1.67
NR1H3-207ENST00000420369 USP19O94966 1318 aa25.51■■□□□ 1.67
NR1H3-207ENST00000420369 PEAK1Q9H792 1746 aa25.51■■□□□ 1.67
NR1H3-207ENST00000420369 KCNH5Q8NCM2 988 aa25.47■■□□□ 1.67
NR1H3-207ENST00000420369 CFAP53Q96M91 514 aa25.47■■□□□ 1.67
NR1H3-207ENST00000420369 CCDC184Q52MB2 194 aa25.46■■□□□ 1.67
NR1H3-207ENST00000420369 SOX12O15370 315 aa25.45■■□□□ 1.66
NR1H3-207ENST00000420369 MTHFSP49914 203 aa25.45■■□□□ 1.66
NR1H3-207ENST00000420369 COL3A1P02461 1466 aaPredicted RBP25.45■■□□□ 1.66
NR1H3-207ENST00000420369 POLKQ9UBT6 870 aa25.43■■□□□ 1.66
NR1H3-207ENST00000420369 RGPD5Q99666 1765 aa25.43■■□□□ 1.66
NR1H3-207ENST00000420369 RTL1A6NKG5 1358 aa25.43■■□□□ 1.66
NR1H3-207ENST00000420369 KIF24Q5T7B8 1368 aa25.43■■□□□ 1.66
NR1H3-207ENST00000420369 LRRC59Q96AG4 307 aaKnown RBP25.42■■□□□ 1.66
NR1H3-207ENST00000420369 ABCC6O95255 1503 aa25.42■■□□□ 1.66
NR1H3-207ENST00000420369 RRS1Q15050 365 aaKnown RBP25.41■■□□□ 1.66
NR1H3-207ENST00000420369 EMILIN1Q9Y6C2 1016 aa25.41■■□□□ 1.66
NR1H3-207ENST00000420369 FLT4P35916 1363 aa25.41■■□□□ 1.66
NR1H3-207ENST00000420369 MAP3K19Q56UN5 1328 aa25.39■■□□□ 1.66
NR1H3-207ENST00000420369 FBLN1P23142 703 aa25.39■■□□□ 1.66
NR1H3-207ENST00000420369 INSRP06213 1382 aa25.39■■□□□ 1.65
NR1H3-207ENST00000420369 PNPLA6Q8IY17 1366 aa25.39■■□□□ 1.65
NR1H3-207ENST00000420369 PPM1GO15355 546 aaPredicted RBP25.38■■□□□ 1.65
NR1H3-207ENST00000420369 GCP02774 474 aa25.38■■□□□ 1.65
NR1H3-207ENST00000420369 COL18A1P39060 1754 aa25.37■■□□□ 1.65
NR1H3-207ENST00000420369 PLEKHG5O94827 1062 aa25.37■■□□□ 1.65
NR1H3-207ENST00000420369 FAM208AQ9UK61 1670 aaKnown RBP25.36■■□□□ 1.65
NR1H3-207ENST00000420369 AMPHP49418 695 aa25.35■■□□□ 1.65
NR1H3-207ENST00000420369 WDR43Q15061 677 aaKnown RBP eCLIP25.35■■□□□ 1.65
NR1H3-207ENST00000420369 RGPD1P0DJD0 1748 aa25.34■■□□□ 1.65
NR1H3-207ENST00000420369 HAP1P54257 671 aaPredicted RBP25.34■■□□□ 1.65
NR1H3-207ENST00000420369 PNISRQ8TF01 805 aaKnown RBP25.34■■□□□ 1.65
NR1H3-207ENST00000420369 FAM9BQ8IZU0 186 aa25.33■■□□□ 1.65
NR1H3-207ENST00000420369 CPDO75976 1380 aa25.32■■□□□ 1.64
NR1H3-207ENST00000420369 CABLES1Q8TDN4 633 aa25.32■■□□□ 1.64
NR1H3-207ENST00000420369 RGPD2P0DJD1 1756 aa25.31■■□□□ 1.64
NR1H3-207ENST00000420369 COL14A1Q05707 1796 aaKnown RBP25.31■■□□□ 1.64
NR1H3-207ENST00000420369 BLMP54132 1417 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms