RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 PCGF6Q9BYE7 350 aa9.72□□□□□ -0.85
LINC02539-202ENST00000419220 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
LINC02539-202ENST00000419220 SLIT1O75093 1534 aa9.72□□□□□ -0.85
LINC02539-202ENST00000419220 SYNMO15061 1565 aa9.71□□□□□ -0.85
LINC02539-202ENST00000419220 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.86
LINC02539-202ENST00000419220 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
LINC02539-202ENST00000419220 RIMS2Q9UQ26 1411 aa9.7□□□□□ -0.86
LINC02539-202ENST00000419220 TMEM131LA2VDJ0 1609 aa9.69□□□□□ -0.86
LINC02539-202ENST00000419220 MED14O60244 1454 aa9.69□□□□□ -0.86
LINC02539-202ENST00000419220 RGL3Q3MIN7 710 aa9.69□□□□□ -0.86
LINC02539-202ENST00000419220 TMEM92Q6UXU6 159 aa9.69□□□□□ -0.86
LINC02539-202ENST00000419220 ANKRD30BQ9BXX2 1392 aa9.69□□□□□ -0.86
LINC02539-202ENST00000419220 STRCQ7RTU9 1775 aa9.68□□□□□ -0.86
LINC02539-202ENST00000419220 ARHGAP23Q9P227 1491 aa9.68□□□□□ -0.86
LINC02539-202ENST00000419220 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
LINC02539-202ENST00000419220 NEURL4Q96JN8 1562 aa9.67□□□□□ -0.86
LINC02539-202ENST00000419220 PLEKHG1Q9ULL1 1385 aa9.67□□□□□ -0.86
LINC02539-202ENST00000419220 LTKP29376 864 aa9.67□□□□□ -0.86
LINC02539-202ENST00000419220 TBX22Q9Y458 520 aa9.67□□□□□ -0.86
LINC02539-202ENST00000419220 CLTCL1P53675 1640 aa9.67□□□□□ -0.86
LINC02539-202ENST00000419220 MYO5BQ9ULV0 1848 aa9.66□□□□□ -0.86
LINC02539-202ENST00000419220 PIK3R4Q99570 1358 aa9.65□□□□□ -0.86
LINC02539-202ENST00000419220 CLSPNQ9HAW4 1339 aa9.65□□□□□ -0.86
LINC02539-202ENST00000419220 EFCAB3Q8N7B9 438 aa9.65□□□□□ -0.86
LINC02539-202ENST00000419220 ZFYVE9O95405 1425 aa9.65□□□□□ -0.87
LINC02539-202ENST00000419220 DIP2AQ14689 1571 aa9.64□□□□□ -0.87
LINC02539-202ENST00000419220 KCNA6P17658 529 aa9.64□□□□□ -0.87
LINC02539-202ENST00000419220 CPS1P31327 1500 aa9.63□□□□□ -0.87
LINC02539-202ENST00000419220 NUTM2DQ5VT03 806 aaPredicted RBP9.63□□□□□ -0.87
LINC02539-202ENST00000419220 DCAF11Q8TEB1 546 aa9.63□□□□□ -0.87
LINC02539-202ENST00000419220 SLC26A8Q96RN1 970 aa9.63□□□□□ -0.87
LINC02539-202ENST00000419220 NEUROD1Q13562 356 aa9.62□□□□□ -0.87
LINC02539-202ENST00000419220 CCER1Q8TC90 406 aaPredicted RBP9.62□□□□□ -0.87
LINC02539-202ENST00000419220 CERKQ8TCT0 537 aa9.62□□□□□ -0.87
LINC02539-202ENST00000419220 RYDENQ9NUL5 291 aaKnown RBP9.62□□□□□ -0.87
LINC02539-202ENST00000419220 TIMELESSQ9UNS1 1208 aa9.62□□□□□ -0.87
LINC02539-202ENST00000419220 IQSEC2Q5JU85 1478 aa9.61□□□□□ -0.87
LINC02539-202ENST00000419220 TOM1O60784 492 aa9.61□□□□□ -0.87
LINC02539-202ENST00000419220 RGS20O76081 388 aa9.61□□□□□ -0.87
LINC02539-202ENST00000419220 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
LINC02539-202ENST00000419220 PROSER2Q86WR7 435 aaPredicted RBP9.61□□□□□ -0.87
LINC02539-202ENST00000419220 TONSLQ96HA7 1378 aa9.61□□□□□ -0.87
LINC02539-202ENST00000419220 PPLO60437 1756 aa9.6□□□□□ -0.87
LINC02539-202ENST00000419220 SPATA31E1Q6ZUB1 1445 aa9.6□□□□□ -0.87
LINC02539-202ENST00000419220 SOX12O15370 315 aa9.6□□□□□ -0.87
LINC02539-202ENST00000419220 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
LINC02539-202ENST00000419220 NEXMIFQ5QGS0 1516 aa9.6□□□□□ -0.87
LINC02539-202ENST00000419220 DHX57Q6P158 1386 aaKnown RBP9.6□□□□□ -0.87
LINC02539-202ENST00000419220 ZNF335Q9H4Z2 1342 aaPredicted RBP9.59□□□□□ -0.87
LINC02539-202ENST00000419220 SETBP1Q9Y6X0 1596 aa9.58□□□□□ -0.88
LINC02539-202ENST00000419220 NCOA3Q9Y6Q9 1424 aa9.58□□□□□ -0.88
LINC02539-202ENST00000419220 AMOTL2Q9Y2J4 779 aa9.58□□□□□ -0.88
LINC02539-202ENST00000419220 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.88
LINC02539-202ENST00000419220 NKTRP30414 1462 aaKnown RBP9.57□□□□□ -0.88
LINC02539-202ENST00000419220 MYOM2P54296 1465 aa9.57□□□□□ -0.88
LINC02539-202ENST00000419220 LAMC1P11047 1609 aa9.56□□□□□ -0.88
LINC02539-202ENST00000419220 CHD2O14647 1828 aaKnown RBP9.56□□□□□ -0.88
LINC02539-202ENST00000419220 MSH6P52701 1360 aa9.56□□□□□ -0.88
LINC02539-202ENST00000419220 ATF3P18847 181 aa9.56□□□□□ -0.88
LINC02539-202ENST00000419220 C14orf93Q9H972 538 aaKnown RBP9.56□□□□□ -0.88
LINC02539-202ENST00000419220 PHF8Q9UPP1 1060 aa9.56□□□□□ -0.88
LINC02539-202ENST00000419220 ADGRD1Q6QNK2 874 aa9.55□□□□□ -0.88
LINC02539-202ENST00000419220 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
LINC02539-202ENST00000419220 FBXO41Q8TF61 875 aa9.55□□□□□ -0.88
LINC02539-202ENST00000419220 SIRT1Q96EB6 747 aa9.55□□□□□ -0.88
LINC02539-202ENST00000419220 SIN3AQ96ST3 1273 aa9.55□□□□□ -0.88
LINC02539-202ENST00000419220 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
LINC02539-202ENST00000419220 C19orf44Q9H6X5 657 aa9.55□□□□□ -0.88
LINC02539-202ENST00000419220 ADGRF5Q8IZF2 1346 aa9.55□□□□□ -0.88
LINC02539-202ENST00000419220 IFT172Q9UG01 1749 aa9.54□□□□□ -0.88
LINC02539-202ENST00000419220 ALKQ9UM73 1620 aa9.54□□□□□ -0.88
LINC02539-202ENST00000419220 UBAP1LF5GYI3 381 aa9.54□□□□□ -0.88
LINC02539-202ENST00000419220 L3MBTL2Q969R5 705 aa9.54□□□□□ -0.88
LINC02539-202ENST00000419220 POGKQ9P215 609 aa9.54□□□□□ -0.88
LINC02539-202ENST00000419220 ADAMTS13Q76LX8 1427 aa9.54□□□□□ -0.88
LINC02539-202ENST00000419220 PPP1R37O75864 691 aa9.53□□□□□ -0.88
LINC02539-202ENST00000419220 PIK3C2GO75747 1445 aa9.53□□□□□ -0.88
LINC02539-202ENST00000419220 LTBP4Q8N2S1 1624 aa9.53□□□□□ -0.88
LINC02539-202ENST00000419220 PRKCSHP14314 528 aaPredicted RBP9.52□□□□□ -0.89
LINC02539-202ENST00000419220 CFAP70Q5T0N1 1121 aa9.52□□□□□ -0.89
LINC02539-202ENST00000419220 STK26Q9P289 416 aa9.52□□□□□ -0.89
LINC02539-202ENST00000419220 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
LINC02539-202ENST00000419220 TMEM94Q12767 1356 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 EIF3AQ14152 1382 aaKnown RBP9.51□□□□□ -0.89
LINC02539-202ENST00000419220 ABCC11Q96J66 1382 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 NWD1Q149M9 1564 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 PSDA5PKW4 1024 aaPredicted RBP9.51□□□□□ -0.89
LINC02539-202ENST00000419220 NUDT7P0C024 238 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 NLRP6P59044 892 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 FBXO22Q8NEZ5 403 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 NRXN1Q9ULB1 1477 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 LRRC7Q96NW7 1537 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 KIAA1210Q9ULL0 1709 aa9.51□□□□□ -0.89
LINC02539-202ENST00000419220 METP08581 1390 aa9.5□□□□□ -0.89
LINC02539-202ENST00000419220 LRPPRCP42704 1394 aaKnown RBP9.5□□□□□ -0.89
LINC02539-202ENST00000419220 TK2O00142 265 aa9.5□□□□□ -0.89
LINC02539-202ENST00000419220 ARHGAP33O14559 1287 aa9.5□□□□□ -0.89
LINC02539-202ENST00000419220 POTEEQ6S8J3 1075 aa9.5□□□□□ -0.89
LINC02539-202ENST00000419220 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
LINC02539-202ENST00000419220 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms