RNA–Protein interactions for RNA: ENST00000419193.6

CAPN8-203, Transcript of calpain 8, humanhuman

TSL 5

Gene CAPN8, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-203ENST00000419193 RALBP1Q15311 655 aa18.52■□□□□ 0.55
CAPN8-203ENST00000419193 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.55
CAPN8-203ENST00000419193 TMC1Q8TDI8 760 aa18.52■□□□□ 0.55
CAPN8-203ENST00000419193 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.55
CAPN8-203ENST00000419193 SPATA31A3Q5VYP0 1347 aa18.51■□□□□ 0.55
CAPN8-203ENST00000419193 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
CAPN8-203ENST00000419193 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
CAPN8-203ENST00000419193 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
CAPN8-203ENST00000419193 ANKARQ7Z5J8 1434 aa18.5■□□□□ 0.55
CAPN8-203ENST00000419193 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
CAPN8-203ENST00000419193 PMFBP1Q8TBY8 1022 aa18.5■□□□□ 0.55
CAPN8-203ENST00000419193 WASLO00401 505 aaPredicted RBP18.49■□□□□ 0.55
CAPN8-203ENST00000419193 SRPK2P78362 688 aaKnown RBP18.49■□□□□ 0.55
CAPN8-203ENST00000419193 PUS7Q96PZ0 661 aaKnown RBP18.49■□□□□ 0.55
CAPN8-203ENST00000419193 COL22A1Q8NFW1 1626 aaPredicted RBP18.49■□□□□ 0.55
CAPN8-203ENST00000419193 CDK12Q9NYV4 1490 aaPredicted RBP18.48■□□□□ 0.55
CAPN8-203ENST00000419193 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
CAPN8-203ENST00000419193 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
CAPN8-203ENST00000419193 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
CAPN8-203ENST00000419193 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
CAPN8-203ENST00000419193 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
CAPN8-203ENST00000419193 NGDNQ8NEJ9 315 aaKnown RBP18.45■□□□□ 0.54
CAPN8-203ENST00000419193 SBNO1A3KN83 1393 aa18.45■□□□□ 0.54
CAPN8-203ENST00000419193 TNS3Q68CZ2 1445 aa18.45■□□□□ 0.54
CAPN8-203ENST00000419193 ADGRB2O60241 1585 aa18.45■□□□□ 0.54
CAPN8-203ENST00000419193 ARHGEF10O15013 1369 aa18.44■□□□□ 0.54
CAPN8-203ENST00000419193 AMER1Q5JTC6 1135 aaPredicted RBP18.44■□□□□ 0.54
CAPN8-203ENST00000419193 CDK19Q9BWU1 502 aa18.44■□□□□ 0.54
CAPN8-203ENST00000419193 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
CAPN8-203ENST00000419193 UPF1Q92900 1129 aaKnown RBP eCLIP18.42■□□□□ 0.54
CAPN8-203ENST00000419193 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
CAPN8-203ENST00000419193 RGPD8O14715 1765 aaPredicted RBP18.41■□□□□ 0.54
CAPN8-203ENST00000419193 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
CAPN8-203ENST00000419193 PRR36Q9H6K5 1346 aa18.41■□□□□ 0.54
CAPN8-203ENST00000419193 PAK3O75914 559 aaPredicted RBP18.41■□□□□ 0.54
CAPN8-203ENST00000419193 CABLES1Q8TDN4 633 aa18.41■□□□□ 0.54
CAPN8-203ENST00000419193 NUDT16Q96DE0 195 aaKnown RBP18.41■□□□□ 0.54
CAPN8-203ENST00000419193 RGS12O14924 1447 aa18.4■□□□□ 0.54
CAPN8-203ENST00000419193 NSD3Q9BZ95 1437 aa18.4■□□□□ 0.54
CAPN8-203ENST00000419193 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
CAPN8-203ENST00000419193 UNC5CLQ8IV45 518 aa18.4■□□□□ 0.54
CAPN8-203ENST00000419193 ATRNO75882 1429 aa18.39■□□□□ 0.53
CAPN8-203ENST00000419193 NPC1L1Q9UHC9 1359 aa18.38■□□□□ 0.53
CAPN8-203ENST00000419193 BCL9LQ86UU0 1499 aa18.38■□□□□ 0.53
CAPN8-203ENST00000419193 GJD4Q96KN9 370 aaPredicted RBP18.38■□□□□ 0.53
CAPN8-203ENST00000419193 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
CAPN8-203ENST00000419193 ANKRD36BQ8N2N9 1353 aa18.37■□□□□ 0.53
CAPN8-203ENST00000419193 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
CAPN8-203ENST00000419193 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
CAPN8-203ENST00000419193 CCDC61Q9Y6R9 512 aa18.37■□□□□ 0.53
CAPN8-203ENST00000419193 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
CAPN8-203ENST00000419193 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
CAPN8-203ENST00000419193 PNISRQ8TF01 805 aaKnown RBP18.34■□□□□ 0.53
CAPN8-203ENST00000419193 TERF2IPQ9NYB0 399 aa18.34■□□□□ 0.53
CAPN8-203ENST00000419193 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
CAPN8-203ENST00000419193 MARF1Q9Y4F3 1742 aaKnown RBP18.34■□□□□ 0.53
CAPN8-203ENST00000419193 SLIT2O94813 1529 aa18.33■□□□□ 0.53
CAPN8-203ENST00000419193 HDGFL2Q7Z4V5 671 aaPredicted RBP18.33■□□□□ 0.53
CAPN8-203ENST00000419193 A0A1W2PP64 1363 aa18.32■□□□□ 0.52
CAPN8-203ENST00000419193 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
CAPN8-203ENST00000419193 ATP7BP35670 1465 aa18.32■□□□□ 0.52
CAPN8-203ENST00000419193 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
CAPN8-203ENST00000419193 ACEP12821 1306 aa18.31■□□□□ 0.52
CAPN8-203ENST00000419193 FAM83GA6ND36 823 aa18.3■□□□□ 0.52
CAPN8-203ENST00000419193 VPS72Q15906 364 aa18.3■□□□□ 0.52
CAPN8-203ENST00000419193 PLEKHG3A1L390 1219 aa18.3■□□□□ 0.52
CAPN8-203ENST00000419193 ITSN1Q15811 1721 aa18.29■□□□□ 0.52
CAPN8-203ENST00000419193 PPIP5K1Q6PFW1 1433 aa18.29■□□□□ 0.52
CAPN8-203ENST00000419193 CD163L1Q9NR16 1453 aa18.28■□□□□ 0.52
CAPN8-203ENST00000419193 BTG4Q9NY30 223 aa18.28■□□□□ 0.52
CAPN8-203ENST00000419193 POLR3AO14802 1390 aaPredicted RBP18.27■□□□□ 0.52
CAPN8-203ENST00000419193 PRDM11Q9NQV5 511 aa18.27■□□□□ 0.51
CAPN8-203ENST00000419193 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.27■□□□□ 0.51
CAPN8-203ENST00000419193 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.51
CAPN8-203ENST00000419193 A0A0G2JS52 829 aa18.26■□□□□ 0.51
CAPN8-203ENST00000419193 TNNT2P45379 298 aaPredicted RBP18.26■□□□□ 0.51
CAPN8-203ENST00000419193 MYT1Q01538 1121 aa18.26■□□□□ 0.51
CAPN8-203ENST00000419193 ABTB2Q8N961 1025 aa18.26■□□□□ 0.51
CAPN8-203ENST00000419193 NSD2O96028 1365 aa18.25■□□□□ 0.51
CAPN8-203ENST00000419193 NUTM2GQ5VZR2 741 aa18.25■□□□□ 0.51
CAPN8-203ENST00000419193 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
CAPN8-203ENST00000419193 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
CAPN8-203ENST00000419193 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
CAPN8-203ENST00000419193 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
CAPN8-203ENST00000419193 ABCA3Q99758 1704 aa18.22■□□□□ 0.51
CAPN8-203ENST00000419193 NWD2Q9ULI1 1742 aa18.22■□□□□ 0.51
CAPN8-203ENST00000419193 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
CAPN8-203ENST00000419193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.51
CAPN8-203ENST00000419193 PLCH1Q4KWH8 1693 aa18.21■□□□□ 0.51
CAPN8-203ENST00000419193 GLI3P10071 1580 aa18.2■□□□□ 0.5
CAPN8-203ENST00000419193 CPSF1Q10570 1443 aaKnown RBP18.2■□□□□ 0.5
CAPN8-203ENST00000419193 SENP3-EIF4A1A0A087X0R7 540 aa18.2■□□□□ 0.5
CAPN8-203ENST00000419193 FYB1O15117 783 aa18.2■□□□□ 0.5
CAPN8-203ENST00000419193 ONECUT3O60422 494 aaPredicted RBP18.2■□□□□ 0.5
CAPN8-203ENST00000419193 WDR43Q15061 677 aaKnown RBP eCLIP18.2■□□□□ 0.5
CAPN8-203ENST00000419193 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
CAPN8-203ENST00000419193 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
CAPN8-203ENST00000419193 EVA1CP58658 441 aa18.19■□□□□ 0.5
CAPN8-203ENST00000419193 SF3B2Q13435 895 aaKnown RBP18.19■□□□□ 0.5
CAPN8-203ENST00000419193 FAM98CQ17RN3 349 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms