RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 RPGRIP1LQ68CZ1 1315 aa11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 PPP1R1BQ9UD71 204 aaPredicted RBP11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 CRYBG1Q9Y4K1 1723 aa11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 UTRNP46939 3433 aa11.69□□□□□ -0.54
NPIPB3-201ENST00000419180 TRIM37O94972 964 aa11.68□□□□□ -0.54
NPIPB3-201ENST00000419180 PSME1Q06323 249 aa11.68□□□□□ -0.54
NPIPB3-201ENST00000419180 ZNF784Q8NCA9 323 aaPredicted RBP11.68□□□□□ -0.54
NPIPB3-201ENST00000419180 ALS2Q96Q42 1657 aa11.68□□□□□ -0.54
NPIPB3-201ENST00000419180 TULP1O00294 542 aaPredicted RBP11.67□□□□□ -0.54
NPIPB3-201ENST00000419180 SPON1Q9HCB6 807 aa11.67□□□□□ -0.54
NPIPB3-201ENST00000419180 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
NPIPB3-201ENST00000419180 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
NPIPB3-201ENST00000419180 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
NPIPB3-201ENST00000419180 APBA3O96018 575 aa11.66□□□□□ -0.54
NPIPB3-201ENST00000419180 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
NPIPB3-201ENST00000419180 STK26Q9P289 416 aa11.66□□□□□ -0.54
NPIPB3-201ENST00000419180 CASZ1Q86V15 1759 aa11.66□□□□□ -0.54
NPIPB3-201ENST00000419180 KCNQ2O43526 872 aa11.65□□□□□ -0.54
NPIPB3-201ENST00000419180 FAM196AQ6ZSG2 479 aa11.65□□□□□ -0.54
NPIPB3-201ENST00000419180 NBPF8Q3BBV2 869 aa11.64□□□□□ -0.55
NPIPB3-201ENST00000419180 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
NPIPB3-201ENST00000419180 MYOM1P52179 1685 aa11.64□□□□□ -0.55
NPIPB3-201ENST00000419180 ADGRF5Q8IZF2 1346 aa11.63□□□□□ -0.55
NPIPB3-201ENST00000419180 YTHDC2Q9H6S0 1430 aaKnown RBP11.63□□□□□ -0.55
NPIPB3-201ENST00000419180 C1QTNF8P60827 252 aa11.63□□□□□ -0.55
NPIPB3-201ENST00000419180 RGPD3A6NKT7 1758 aaPredicted RBP11.63□□□□□ -0.55
NPIPB3-201ENST00000419180 RGPD4Q7Z3J3 1758 aa11.63□□□□□ -0.55
NPIPB3-201ENST00000419180 SPATA31A1Q5TZJ5 1347 aa11.62□□□□□ -0.55
NPIPB3-201ENST00000419180 PIK3C2GO75747 1445 aa11.61□□□□□ -0.55
NPIPB3-201ENST00000419180 ANKARQ7Z5J8 1434 aa11.61□□□□□ -0.55
NPIPB3-201ENST00000419180 PHRF1Q9P1Y6 1649 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-201ENST00000419180 ITGAEP38570 1179 aa11.6□□□□□ -0.55
NPIPB3-201ENST00000419180 TMEM132EQ6IEE7 984 aa11.6□□□□□ -0.55
NPIPB3-201ENST00000419180 CHD4Q14839 1912 aa11.6□□□□□ -0.55
NPIPB3-201ENST00000419180 CEP350Q5VT06 3117 aa11.59□□□□□ -0.55
NPIPB3-201ENST00000419180 PMFBP1Q8TBY8 1022 aa11.58□□□□□ -0.56
NPIPB3-201ENST00000419180 PRDM11Q9NQV5 511 aa11.58□□□□□ -0.56
NPIPB3-201ENST00000419180 SIRT1Q96EB6 747 aa11.57□□□□□ -0.56
NPIPB3-201ENST00000419180 SPATA31E1Q6ZUB1 1445 aa11.57□□□□□ -0.56
NPIPB3-201ENST00000419180 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
NPIPB3-201ENST00000419180 PARP4Q9UKK3 1724 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-201ENST00000419180 KIAA0232Q92628 1395 aa11.56□□□□□ -0.56
NPIPB3-201ENST00000419180 ANKRD30BQ9BXX2 1392 aa11.56□□□□□ -0.56
NPIPB3-201ENST00000419180 SSH2Q76I76 1423 aa11.56□□□□□ -0.56
NPIPB3-201ENST00000419180 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
NPIPB3-201ENST00000419180 ACIN1Q9UKV3 1341 aaKnown RBP11.56□□□□□ -0.56
NPIPB3-201ENST00000419180 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
NPIPB3-201ENST00000419180 PDE3BQ13370 1112 aa11.55□□□□□ -0.56
NPIPB3-201ENST00000419180 BARGINQ6ZT62 677 aa11.55□□□□□ -0.56
NPIPB3-201ENST00000419180 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
NPIPB3-201ENST00000419180 PTGER2P43116 358 aa11.54□□□□□ -0.56
NPIPB3-201ENST00000419180 DLC1Q96QB1 1528 aa11.54□□□□□ -0.56
NPIPB3-201ENST00000419180 TULP4Q9NRJ4 1543 aa11.54□□□□□ -0.56
NPIPB3-201ENST00000419180 LMO7Q8WWI1 1683 aa11.53□□□□□ -0.56
NPIPB3-201ENST00000419180 CHRNA2Q15822 529 aa11.53□□□□□ -0.56
NPIPB3-201ENST00000419180 PDGFDQ9GZP0 370 aaPredicted RBP11.53□□□□□ -0.56
NPIPB3-201ENST00000419180 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
NPIPB3-201ENST00000419180 SBF2Q86WG5 1849 aa11.53□□□□□ -0.56
NPIPB3-201ENST00000419180 ZBTB7AO95365 584 aa11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 SAFB2Q14151 953 aaKnown RBP eCLIP11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 PRAM1Q96QH2 718 aa11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 PRR36Q9H6K5 1346 aa11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 LRRC37A3O60309 1634 aa11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 OVOS2A0A0G2JMS6 1433 aa11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.57
NPIPB3-201ENST00000419180 GIGYF1O75420 1035 aaPredicted RBP11.51□□□□□ -0.57
NPIPB3-201ENST00000419180 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
NPIPB3-201ENST00000419180 EIF3AQ14152 1382 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-201ENST00000419180 DHX57Q6P158 1386 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-201ENST00000419180 ATP7BP35670 1465 aa11.51□□□□□ -0.57
NPIPB3-201ENST00000419180 SHANK3Q9BYB0 1731 aa11.5□□□□□ -0.57
NPIPB3-201ENST00000419180 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
NPIPB3-201ENST00000419180 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
NPIPB3-201ENST00000419180 ITSN1Q15811 1721 aa11.49□□□□□ -0.57
NPIPB3-201ENST00000419180 PLSCR1O15162 318 aa11.49□□□□□ -0.57
NPIPB3-201ENST00000419180 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
NPIPB3-201ENST00000419180 TCP11L2Q8N4U5 519 aa11.49□□□□□ -0.57
NPIPB3-201ENST00000419180 C14orf93Q9H972 538 aaKnown RBP11.49□□□□□ -0.57
NPIPB3-201ENST00000419180 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
NPIPB3-201ENST00000419180 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
NPIPB3-201ENST00000419180 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-201ENST00000419180 PODXL2Q9NZ53 605 aa11.48□□□□□ -0.57
NPIPB3-201ENST00000419180 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
NPIPB3-201ENST00000419180 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
NPIPB3-201ENST00000419180 MAP3K5Q99683 1374 aa11.47□□□□□ -0.57
NPIPB3-201ENST00000419180 ZC3H6P61129 1189 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-201ENST00000419180 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
NPIPB3-201ENST00000419180 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
NPIPB3-201ENST00000419180 WNK3Q9BYP7 1800 aa11.46□□□□□ -0.57
NPIPB3-201ENST00000419180 COL5A2P05997 1499 aaPredicted RBP11.46□□□□□ -0.57
NPIPB3-201ENST00000419180 EVA1CP58658 441 aa11.46□□□□□ -0.57
NPIPB3-201ENST00000419180 CFAP70Q5T0N1 1121 aa11.46□□□□□ -0.57
NPIPB3-201ENST00000419180 NGDNQ8NEJ9 315 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms