RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 KIF20BQ96Q89 1820 aa18.64■□□□□ 0.57
CHMP5-202ENST00000419016 MST1RQ04912 1400 aa18.63■□□□□ 0.57
CHMP5-202ENST00000419016 ATF3P18847 181 aa18.62■□□□□ 0.57
CHMP5-202ENST00000419016 CADPS2Q86UW7 1296 aa18.62■□□□□ 0.57
CHMP5-202ENST00000419016 NME9Q86XW9 330 aa18.62■□□□□ 0.57
CHMP5-202ENST00000419016 MSH6P52701 1360 aa18.62■□□□□ 0.57
CHMP5-202ENST00000419016 ESCO1Q5FWF5 840 aa18.61■□□□□ 0.57
CHMP5-202ENST00000419016 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
CHMP5-202ENST00000419016 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
CHMP5-202ENST00000419016 TTC21AQ8NDW8 1320 aa18.61■□□□□ 0.57
CHMP5-202ENST00000419016 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
CHMP5-202ENST00000419016 ZRANB1Q9UGI0 708 aa18.59■□□□□ 0.57
CHMP5-202ENST00000419016 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
CHMP5-202ENST00000419016 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
CHMP5-202ENST00000419016 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
CHMP5-202ENST00000419016 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
CHMP5-202ENST00000419016 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
CHMP5-202ENST00000419016 USP31Q70CQ4 1352 aa18.56■□□□□ 0.56
CHMP5-202ENST00000419016 MTHFSP49914 203 aa18.55■□□□□ 0.56
CHMP5-202ENST00000419016 KIF1AQ12756 1690 aa18.55■□□□□ 0.56
CHMP5-202ENST00000419016 COG3Q96JB2 828 aa18.55■□□□□ 0.56
CHMP5-202ENST00000419016 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
CHMP5-202ENST00000419016 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
CHMP5-202ENST00000419016 FOXO3O43524 673 aa18.53■□□□□ 0.56
CHMP5-202ENST00000419016 INSRP06213 1382 aa18.53■□□□□ 0.56
CHMP5-202ENST00000419016 PSME1Q06323 249 aa18.52■□□□□ 0.56
CHMP5-202ENST00000419016 USP54Q70EL1 1684 aa18.52■□□□□ 0.55
CHMP5-202ENST00000419016 PNPLA6Q8IY17 1366 aa18.52■□□□□ 0.55
CHMP5-202ENST00000419016 POLKQ9UBT6 870 aa18.51■□□□□ 0.55
CHMP5-202ENST00000419016 SMG6Q86US8 1419 aaKnown RBP18.51■□□□□ 0.55
CHMP5-202ENST00000419016 FBLN1P23142 703 aa18.5■□□□□ 0.55
CHMP5-202ENST00000419016 SLAIN2Q9P270 581 aa18.5■□□□□ 0.55
CHMP5-202ENST00000419016 COL3A1P02461 1466 aaPredicted RBP18.49■□□□□ 0.55
CHMP5-202ENST00000419016 TRPM3Q9HCF6 1732 aaPredicted RBP18.49■□□□□ 0.55
CHMP5-202ENST00000419016 BRINP3Q76B58 766 aa18.48■□□□□ 0.55
CHMP5-202ENST00000419016 MARF1Q9Y4F3 1742 aaKnown RBP18.48■□□□□ 0.55
CHMP5-202ENST00000419016 KRT28Q7Z3Y7 464 aa18.48■□□□□ 0.55
CHMP5-202ENST00000419016 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
CHMP5-202ENST00000419016 ABTB2Q8N961 1025 aa18.47■□□□□ 0.55
CHMP5-202ENST00000419016 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
CHMP5-202ENST00000419016 PAK3O75914 559 aaPredicted RBP18.46■□□□□ 0.55
CHMP5-202ENST00000419016 NLRP6P59044 892 aa18.46■□□□□ 0.55
CHMP5-202ENST00000419016 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
CHMP5-202ENST00000419016 BLMP54132 1417 aaPredicted RBP18.46■□□□□ 0.55
CHMP5-202ENST00000419016 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
CHMP5-202ENST00000419016 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
CHMP5-202ENST00000419016 XPCQ01831 940 aaPredicted RBP18.45■□□□□ 0.54
CHMP5-202ENST00000419016 EMILIN1Q9Y6C2 1016 aa18.45■□□□□ 0.54
CHMP5-202ENST00000419016 NPHP3Q7Z494 1330 aa18.45■□□□□ 0.54
CHMP5-202ENST00000419016 PXDNQ92626 1479 aa18.45■□□□□ 0.54
CHMP5-202ENST00000419016 SBNO1A3KN83 1393 aa18.44■□□□□ 0.54
CHMP5-202ENST00000419016 WDR43Q15061 677 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHMP5-202ENST00000419016 CDK12Q9NYV4 1490 aaPredicted RBP18.44■□□□□ 0.54
CHMP5-202ENST00000419016 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
CHMP5-202ENST00000419016 DDX17Q92841 729 aaKnown RBP18.43■□□□□ 0.54
CHMP5-202ENST00000419016 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
CHMP5-202ENST00000419016 NUTM2GQ5VZR2 741 aa18.42■□□□□ 0.54
CHMP5-202ENST00000419016 ALS2Q96Q42 1657 aa18.42■□□□□ 0.54
CHMP5-202ENST00000419016 USP19O94966 1318 aa18.4■□□□□ 0.54
CHMP5-202ENST00000419016 MAP3K19Q56UN5 1328 aa18.4■□□□□ 0.54
CHMP5-202ENST00000419016 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.54
CHMP5-202ENST00000419016 ZBED9Q6R2W3 1325 aa18.39■□□□□ 0.54
CHMP5-202ENST00000419016 PEAK1Q9H792 1746 aa18.39■□□□□ 0.53
CHMP5-202ENST00000419016 SLIT3O75094 1523 aa18.39■□□□□ 0.53
CHMP5-202ENST00000419016 NFAT5O94916 1531 aa18.39■□□□□ 0.53
CHMP5-202ENST00000419016 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
CHMP5-202ENST00000419016 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
CHMP5-202ENST00000419016 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
CHMP5-202ENST00000419016 IL13P35225 146 aa18.37■□□□□ 0.53
CHMP5-202ENST00000419016 KIF24Q5T7B8 1368 aa18.37■□□□□ 0.53
CHMP5-202ENST00000419016 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
CHMP5-202ENST00000419016 NUDCQ9Y266 331 aa18.37■□□□□ 0.53
CHMP5-202ENST00000419016 KCNH5Q8NCM2 988 aa18.36■□□□□ 0.53
CHMP5-202ENST00000419016 SOX12O15370 315 aa18.35■□□□□ 0.53
CHMP5-202ENST00000419016 NHSL1Q5SYE7 1610 aa18.35■□□□□ 0.53
CHMP5-202ENST00000419016 GCP02774 474 aa18.35■□□□□ 0.53
CHMP5-202ENST00000419016 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
CHMP5-202ENST00000419016 FLT4P35916 1363 aa18.34■□□□□ 0.53
CHMP5-202ENST00000419016 U2AF1L5P0DN76 240 aaPredicted RBP18.33■□□□□ 0.53
CHMP5-202ENST00000419016 U2AF1Q01081 240 aaKnown RBP eCLIP18.33■□□□□ 0.53
CHMP5-202ENST00000419016 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.53
CHMP5-202ENST00000419016 ARHGEF10O15013 1369 aa18.33■□□□□ 0.52
CHMP5-202ENST00000419016 EIF4A2Q14240 407 aaKnown RBP18.32■□□□□ 0.52
CHMP5-202ENST00000419016 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
CHMP5-202ENST00000419016 PHRF1Q9P1Y6 1649 aaKnown RBP18.32■□□□□ 0.52
CHMP5-202ENST00000419016 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
CHMP5-202ENST00000419016 ARHGEF25Q86VW2 580 aa18.31■□□□□ 0.52
CHMP5-202ENST00000419016 CCDC146Q8IYE0 955 aa18.31■□□□□ 0.52
CHMP5-202ENST00000419016 RTL1A6NKG5 1358 aa18.31■□□□□ 0.52
CHMP5-202ENST00000419016 HOXC9P31274 260 aa18.31■□□□□ 0.52
CHMP5-202ENST00000419016 RUNDC1Q96C34 613 aa18.31■□□□□ 0.52
CHMP5-202ENST00000419016 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
CHMP5-202ENST00000419016 ROBO1Q9Y6N7 1651 aa18.3■□□□□ 0.52
CHMP5-202ENST00000419016 IQSEC2Q5JU85 1478 aa18.3■□□□□ 0.52
CHMP5-202ENST00000419016 SENP3-EIF4A1A0A087X0R7 540 aa18.3■□□□□ 0.52
CHMP5-202ENST00000419016 AMPHP49418 695 aa18.3■□□□□ 0.52
CHMP5-202ENST00000419016 IP6K1Q92551 441 aa18.3■□□□□ 0.52
CHMP5-202ENST00000419016 CRYBG1Q9Y4K1 1723 aa18.29■□□□□ 0.52
CHMP5-202ENST00000419016 AHDC1Q5TGY3 1603 aaPredicted RBP18.29■□□□□ 0.52
CHMP5-202ENST00000419016 APAF1O14727 1248 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms