RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
HLA-DMB-258ENST00000418107 DLC1Q96QB1 1528 aa18.44■□□□□ 0.54
HLA-DMB-258ENST00000418107 HSPA5P11021 654 aaKnown RBP18.43■□□□□ 0.54
HLA-DMB-258ENST00000418107 ADGRB2O60241 1585 aa18.43■□□□□ 0.54
HLA-DMB-258ENST00000418107 NRAPQ86VF7 1730 aa18.42■□□□□ 0.54
HLA-DMB-258ENST00000418107 FAM98CQ17RN3 349 aaKnown RBP18.42■□□□□ 0.54
HLA-DMB-258ENST00000418107 STAC3Q96MF2 364 aa18.42■□□□□ 0.54
HLA-DMB-258ENST00000418107 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
HLA-DMB-258ENST00000418107 TRPM3Q9HCF6 1732 aaPredicted RBP18.41■□□□□ 0.54
HLA-DMB-258ENST00000418107 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
HLA-DMB-258ENST00000418107 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
HLA-DMB-258ENST00000418107 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
HLA-DMB-258ENST00000418107 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
HLA-DMB-258ENST00000418107 PRR36Q9H6K5 1346 aa18.4■□□□□ 0.54
HLA-DMB-258ENST00000418107 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
HLA-DMB-258ENST00000418107 GPRASP1Q5JY77 1395 aa18.39■□□□□ 0.53
HLA-DMB-258ENST00000418107 PSDA5PKW4 1024 aaPredicted RBP18.39■□□□□ 0.53
HLA-DMB-258ENST00000418107 BAG6P46379 1132 aa18.39■□□□□ 0.53
HLA-DMB-258ENST00000418107 ALS2Q96Q42 1657 aa18.38■□□□□ 0.53
HLA-DMB-258ENST00000418107 LRP5O75197 1615 aa18.37■□□□□ 0.53
HLA-DMB-258ENST00000418107 TRPM1Q7Z4N2 1603 aa18.37■□□□□ 0.53
HLA-DMB-258ENST00000418107 COL14A1Q05707 1796 aaKnown RBP18.37■□□□□ 0.53
HLA-DMB-258ENST00000418107 EIF3AQ14152 1382 aaKnown RBP18.37■□□□□ 0.53
HLA-DMB-258ENST00000418107 TULP4Q9NRJ4 1543 aa18.37■□□□□ 0.53
HLA-DMB-258ENST00000418107 FAM182BQ5T319 152 aa18.36■□□□□ 0.53
HLA-DMB-258ENST00000418107 SPATA31A5Q5VU36 1347 aa18.35■□□□□ 0.53
HLA-DMB-258ENST00000418107 SPATA31A7Q8IWB4 1347 aa18.35■□□□□ 0.53
HLA-DMB-258ENST00000418107 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
HLA-DMB-258ENST00000418107 EN1Q05925 392 aaPredicted RBP18.34■□□□□ 0.53
HLA-DMB-258ENST00000418107 NGDNQ8NEJ9 315 aaKnown RBP18.34■□□□□ 0.53
HLA-DMB-258ENST00000418107 USP47Q96K76 1375 aa18.34■□□□□ 0.53
HLA-DMB-258ENST00000418107 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.53
HLA-DMB-258ENST00000418107 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
HLA-DMB-258ENST00000418107 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
HLA-DMB-258ENST00000418107 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
HLA-DMB-258ENST00000418107 KIAA1210Q9ULL0 1709 aa18.31■□□□□ 0.52
HLA-DMB-258ENST00000418107 RGPD1P0DJD0 1748 aa18.31■□□□□ 0.52
HLA-DMB-258ENST00000418107 DDX10Q13206 875 aaKnown RBP18.3■□□□□ 0.52
HLA-DMB-258ENST00000418107 THSD7AQ9UPZ6 1657 aa18.3■□□□□ 0.52
HLA-DMB-258ENST00000418107 KIAA0232Q92628 1395 aa18.28■□□□□ 0.52
HLA-DMB-258ENST00000418107 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
HLA-DMB-258ENST00000418107 CHRNA2Q15822 529 aa18.28■□□□□ 0.52
HLA-DMB-258ENST00000418107 ATP7BP35670 1465 aa18.28■□□□□ 0.52
HLA-DMB-258ENST00000418107 DISP2A7MBM2 1401 aa18.27■□□□□ 0.52
HLA-DMB-258ENST00000418107 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.51
HLA-DMB-258ENST00000418107 TNS1Q9HBL0 1735 aaKnown RBP18.27■□□□□ 0.51
HLA-DMB-258ENST00000418107 SPATA31A1Q5TZJ5 1347 aa18.27■□□□□ 0.51
HLA-DMB-258ENST00000418107 STRN4Q9NRL3 753 aa18.26■□□□□ 0.51
HLA-DMB-258ENST00000418107 ARHGEF28Q8N1W1 1705 aaKnown RBP18.25■□□□□ 0.51
HLA-DMB-258ENST00000418107 ZC3H6P61129 1189 aaKnown RBP18.25■□□□□ 0.51
HLA-DMB-258ENST00000418107 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
HLA-DMB-258ENST00000418107 NUTM2GQ5VZR2 741 aa18.25■□□□□ 0.51
HLA-DMB-258ENST00000418107 ITSN1Q15811 1721 aa18.24■□□□□ 0.51
HLA-DMB-258ENST00000418107 PHRF1Q9P1Y6 1649 aaKnown RBP18.24■□□□□ 0.51
HLA-DMB-258ENST00000418107 ST20-MTHFSA0A0A6YYL1 179 aa18.24■□□□□ 0.51
HLA-DMB-258ENST00000418107 TRIM37O94972 964 aa18.24■□□□□ 0.51
HLA-DMB-258ENST00000418107 POLR3GLQ9BT43 218 aa18.23■□□□□ 0.51
HLA-DMB-258ENST00000418107 FAM196AQ6ZSG2 479 aa18.22■□□□□ 0.51
HLA-DMB-258ENST00000418107 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
HLA-DMB-258ENST00000418107 USP35Q9P2H5 1018 aa18.22■□□□□ 0.51
HLA-DMB-258ENST00000418107 CAMKK2Q96RR4 588 aa18.21■□□□□ 0.51
HLA-DMB-258ENST00000418107 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
HLA-DMB-258ENST00000418107 CCDC7Q96M83 1385 aa18.2■□□□□ 0.5
HLA-DMB-258ENST00000418107 MIER1Q8N108 512 aa18.2■□□□□ 0.5
HLA-DMB-258ENST00000418107 POLR3AO14802 1390 aaPredicted RBP18.19■□□□□ 0.5
HLA-DMB-258ENST00000418107 ACEP12821 1306 aa18.19■□□□□ 0.5
HLA-DMB-258ENST00000418107 C11orf95C9JLR9 678 aaPredicted RBP18.19■□□□□ 0.5
HLA-DMB-258ENST00000418107 APBA3O96018 575 aa18.19■□□□□ 0.5
HLA-DMB-258ENST00000418107 SSH2Q76I76 1423 aa18.19■□□□□ 0.5
HLA-DMB-258ENST00000418107 EVA1CP58658 441 aa18.18■□□□□ 0.5
HLA-DMB-258ENST00000418107 TOPAZ1Q8N9V7 1692 aa18.18■□□□□ 0.5
HLA-DMB-258ENST00000418107 KIF7Q2M1P5 1343 aa18.18■□□□□ 0.5
HLA-DMB-258ENST00000418107 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
HLA-DMB-258ENST00000418107 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
HLA-DMB-258ENST00000418107 LARP1Q6PKG0 1096 aaKnown RBP18.17■□□□□ 0.5
HLA-DMB-258ENST00000418107 BARGINQ6ZT62 677 aa18.17■□□□□ 0.5
HLA-DMB-258ENST00000418107 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
HLA-DMB-258ENST00000418107 CAMTA1Q9Y6Y1 1673 aa18.16■□□□□ 0.5
HLA-DMB-258ENST00000418107 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
HLA-DMB-258ENST00000418107 PARD3Q8TEW0 1356 aa18.15■□□□□ 0.5
HLA-DMB-258ENST00000418107 PLEKHG3A1L390 1219 aa18.15■□□□□ 0.5
HLA-DMB-258ENST00000418107 TCP11L2Q8N4U5 519 aa18.14■□□□□ 0.49
HLA-DMB-258ENST00000418107 CPDO75976 1380 aa18.13■□□□□ 0.49
HLA-DMB-258ENST00000418107 LMO7Q8WWI1 1683 aa18.13■□□□□ 0.49
HLA-DMB-258ENST00000418107 USP19O94966 1318 aa18.13■□□□□ 0.49
HLA-DMB-258ENST00000418107 TMF1P82094 1093 aa18.12■□□□□ 0.49
HLA-DMB-258ENST00000418107 RREB1Q92766 1687 aa18.12■□□□□ 0.49
HLA-DMB-258ENST00000418107 ANP32CO43423 234 aa18.11■□□□□ 0.49
HLA-DMB-258ENST00000418107 NUP188Q5SRE5 1749 aa18.11■□□□□ 0.49
HLA-DMB-258ENST00000418107 PPIP5K1Q6PFW1 1433 aa18.1■□□□□ 0.49
HLA-DMB-258ENST00000418107 GCP02774 474 aa18.09■□□□□ 0.49
HLA-DMB-258ENST00000418107 SRPK2P78362 688 aaKnown RBP18.09■□□□□ 0.49
HLA-DMB-258ENST00000418107 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
HLA-DMB-258ENST00000418107 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
HLA-DMB-258ENST00000418107 COL5A2P05997 1499 aaPredicted RBP18.08■□□□□ 0.49
HLA-DMB-258ENST00000418107 SLC24A1O60721 1099 aa18.08■□□□□ 0.49
HLA-DMB-258ENST00000418107 NBPF14Q5TI25 921 aa18.08■□□□□ 0.49
HLA-DMB-258ENST00000418107 THRAP3Q9Y2W1 955 aaKnown RBP18.08■□□□□ 0.49
HLA-DMB-258ENST00000418107 ZBTB7CA1YPR0 619 aa18.07■□□□□ 0.48
HLA-DMB-258ENST00000418107 TESK2Q96S53 571 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms