RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 PPIP5K1Q6PFW1 1433 aa15.49■□□□□ 0.07
SNRNP25-204ENST00000417493 ABCA3Q99758 1704 aa15.48■□□□□ 0.07
SNRNP25-204ENST00000417493 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.48■□□□□ 0.07
SNRNP25-204ENST00000417493 ACEP12821 1306 aa15.48■□□□□ 0.07
SNRNP25-204ENST00000417493 RBM6P78332 1123 aaKnown RBP15.48■□□□□ 0.07
SNRNP25-204ENST00000417493 ATAD2Q6PL18 1390 aa15.48■□□□□ 0.07
SNRNP25-204ENST00000417493 CCER1Q8TC90 406 aaPredicted RBP15.47■□□□□ 0.07
SNRNP25-204ENST00000417493 CABP2Q9NPB3 220 aa15.47■□□□□ 0.07
SNRNP25-204ENST00000417493 NWD2Q9ULI1 1742 aa15.47■□□□□ 0.07
SNRNP25-204ENST00000417493 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
SNRNP25-204ENST00000417493 PUS7Q96PZ0 661 aaKnown RBP15.43■□□□□ 0.06
SNRNP25-204ENST00000417493 PLCH1Q4KWH8 1693 aa15.43■□□□□ 0.06
SNRNP25-204ENST00000417493 COL14A1Q05707 1796 aaKnown RBP15.43■□□□□ 0.06
SNRNP25-204ENST00000417493 NLRP13Q86W25 1043 aa15.42■□□□□ 0.06
SNRNP25-204ENST00000417493 UNC5CLQ8IV45 518 aa15.42■□□□□ 0.06
SNRNP25-204ENST00000417493 ABTB2Q8N961 1025 aa15.42■□□□□ 0.06
SNRNP25-204ENST00000417493 CABLES1Q8TDN4 633 aa15.42■□□□□ 0.06
SNRNP25-204ENST00000417493 CABP1Q9NZU7 370 aa15.42■□□□□ 0.06
SNRNP25-204ENST00000417493 ATRNO75882 1429 aa15.42■□□□□ 0.06
SNRNP25-204ENST00000417493 AKAP12Q02952 1782 aa15.41■□□□□ 0.06
SNRNP25-204ENST00000417493 CRYBG1Q9Y4K1 1723 aa15.41■□□□□ 0.06
SNRNP25-204ENST00000417493 PLEKHG5O94827 1062 aa15.41■□□□□ 0.06
SNRNP25-204ENST00000417493 SLIT2O94813 1529 aa15.41■□□□□ 0.06
SNRNP25-204ENST00000417493 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
SNRNP25-204ENST00000417493 USP6P35125 1406 aa15.4■□□□□ 0.06
SNRNP25-204ENST00000417493 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
SNRNP25-204ENST00000417493 CDCA8Q53HL2 280 aa15.39■□□□□ 0.05
SNRNP25-204ENST00000417493 NINLQ9Y2I6 1382 aa15.38■□□□□ 0.05
SNRNP25-204ENST00000417493 HDGFL2Q7Z4V5 671 aaPredicted RBP15.38■□□□□ 0.05
SNRNP25-204ENST00000417493 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
SNRNP25-204ENST00000417493 PRDM11Q9NQV5 511 aa15.38■□□□□ 0.05
SNRNP25-204ENST00000417493 TTC21AQ8NDW8 1320 aa15.38■□□□□ 0.05
SNRNP25-204ENST00000417493 ST20-MTHFSA0A0A6YYL1 179 aa15.37■□□□□ 0.05
SNRNP25-204ENST00000417493 TERF2IPQ9NYB0 399 aa15.37■□□□□ 0.05
SNRNP25-204ENST00000417493 CCDC9Q9Y3X0 531 aaKnown RBP15.37■□□□□ 0.05
SNRNP25-204ENST00000417493 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
SNRNP25-204ENST00000417493 USP47Q96K76 1375 aa15.36■□□□□ 0.05
SNRNP25-204ENST00000417493 TMF1P82094 1093 aa15.36■□□□□ 0.05
SNRNP25-204ENST00000417493 VPS72Q15906 364 aa15.36■□□□□ 0.05
SNRNP25-204ENST00000417493 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
SNRNP25-204ENST00000417493 MON2Q7Z3U7 1717 aa15.36■□□□□ 0.05
SNRNP25-204ENST00000417493 FAM83GA6ND36 823 aa15.35■□□□□ 0.05
SNRNP25-204ENST00000417493 NLRP6P59044 892 aa15.35■□□□□ 0.05
SNRNP25-204ENST00000417493 RGS12O14924 1447 aa15.34■□□□□ 0.05
SNRNP25-204ENST00000417493 NUTM2GQ5VZR2 741 aa15.34■□□□□ 0.05
SNRNP25-204ENST00000417493 BTG4Q9NY30 223 aa15.34■□□□□ 0.05
SNRNP25-204ENST00000417493 USP19O94966 1318 aa15.34■□□□□ 0.05
SNRNP25-204ENST00000417493 NRAPQ86VF7 1730 aa15.34■□□□□ 0.05
SNRNP25-204ENST00000417493 CPSF1Q10570 1443 aaKnown RBP15.34■□□□□ 0.05
SNRNP25-204ENST00000417493 NRKQ7Z2Y5 1582 aa15.33■□□□□ 0.05
SNRNP25-204ENST00000417493 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.04
SNRNP25-204ENST00000417493 CPDO75976 1380 aa15.33■□□□□ 0.04
SNRNP25-204ENST00000417493 KIAA0232Q92628 1395 aa15.33■□□□□ 0.04
SNRNP25-204ENST00000417493 GCP02774 474 aa15.32■□□□□ 0.04
SNRNP25-204ENST00000417493 TTC21BQ7Z4L5 1316 aa15.32■□□□□ 0.04
SNRNP25-204ENST00000417493 PIK3C2AO00443 1686 aa15.32■□□□□ 0.04
SNRNP25-204ENST00000417493 ZC3H6P61129 1189 aaKnown RBP15.31■□□□□ 0.04
SNRNP25-204ENST00000417493 TESK2Q96S53 571 aa15.31■□□□□ 0.04
SNRNP25-204ENST00000417493 SSH2Q76I76 1423 aa15.31■□□□□ 0.04
SNRNP25-204ENST00000417493 GLI3P10071 1580 aa15.3■□□□□ 0.04
SNRNP25-204ENST00000417493 EVA1CP58658 441 aa15.3■□□□□ 0.04
SNRNP25-204ENST00000417493 EDC4Q6P2E9 1401 aaKnown RBP15.3■□□□□ 0.04
SNRNP25-204ENST00000417493 SLIT3O75094 1523 aa15.29■□□□□ 0.04
SNRNP25-204ENST00000417493 A0A0G2JS52 829 aa15.28■□□□□ 0.04
SNRNP25-204ENST00000417493 MYT1Q01538 1121 aa15.28■□□□□ 0.04
SNRNP25-204ENST00000417493 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
SNRNP25-204ENST00000417493 SLC12A5Q9H2X9 1139 aa15.27■□□□□ 0.04
SNRNP25-204ENST00000417493 USP54Q70EL1 1684 aa15.27■□□□□ 0.03
SNRNP25-204ENST00000417493 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
SNRNP25-204ENST00000417493 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
SNRNP25-204ENST00000417493 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
SNRNP25-204ENST00000417493 EIF4G2P78344 907 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNRNP25-204ENST00000417493 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
SNRNP25-204ENST00000417493 UPF1Q92900 1129 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNRNP25-204ENST00000417493 STRN4Q9NRL3 753 aa15.26■□□□□ 0.03
SNRNP25-204ENST00000417493 BRWD3Q6RI45 1802 aa15.26■□□□□ 0.03
SNRNP25-204ENST00000417493 LMO7Q8WWI1 1683 aa15.25■□□□□ 0.03
SNRNP25-204ENST00000417493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNRNP25-204ENST00000417493 SEPT12Q8IYM1 358 aa15.25■□□□□ 0.03
SNRNP25-204ENST00000417493 A0A1W2PP64 1363 aa15.24■□□□□ 0.03
SNRNP25-204ENST00000417493 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
SNRNP25-204ENST00000417493 USP31Q70CQ4 1352 aa15.24■□□□□ 0.03
SNRNP25-204ENST00000417493 ANKRD36BQ8N2N9 1353 aa15.24■□□□□ 0.03
SNRNP25-204ENST00000417493 ABCC6O95255 1503 aa15.24■□□□□ 0.03
SNRNP25-204ENST00000417493 ZBTB7CA1YPR0 619 aa15.24■□□□□ 0.03
SNRNP25-204ENST00000417493 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
SNRNP25-204ENST00000417493 FAM98CQ17RN3 349 aaKnown RBP15.23■□□□□ 0.03
SNRNP25-204ENST00000417493 THRAP3Q9Y2W1 955 aaKnown RBP15.23■□□□□ 0.03
SNRNP25-204ENST00000417493 SPATA31A1Q5TZJ5 1347 aa15.22■□□□□ 0.03
SNRNP25-204ENST00000417493 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
SNRNP25-204ENST00000417493 CAMTA1Q9Y6Y1 1673 aa15.22■□□□□ 0.03
SNRNP25-204ENST00000417493 SF3B2Q13435 895 aaKnown RBP15.21■□□□□ 0.03
SNRNP25-204ENST00000417493 LTN1O94822 1766 aa15.21■□□□□ 0.02
SNRNP25-204ENST00000417493 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
SNRNP25-204ENST00000417493 BARGINQ6ZT62 677 aa15.2■□□□□ 0.02
SNRNP25-204ENST00000417493 ARHGEF25Q86VW2 580 aa15.2■□□□□ 0.02
SNRNP25-204ENST00000417493 TCP11L2Q8N4U5 519 aa15.2■□□□□ 0.02
SNRNP25-204ENST00000417493 COG3Q96JB2 828 aa15.2■□□□□ 0.02
SNRNP25-204ENST00000417493 CRB1P82279 1406 aa15.19■□□□□ 0.02
SNRNP25-204ENST00000417493 COL18A1P39060 1754 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms