RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 NCOA3Q9Y6Q9 1424 aa7.97□□□□□ -1.13
CCNT1-202ENST00000417344 LMOD2Q6P5Q4 547 aa7.97□□□□□ -1.13
CCNT1-202ENST00000417344 CARMIL1Q5VZK9 1371 aa7.97□□□□□ -1.13
CCNT1-202ENST00000417344 LHX8Q68G74 356 aa7.96□□□□□ -1.13
CCNT1-202ENST00000417344 PDLIM2Q96JY6 352 aa7.96□□□□□ -1.13
CCNT1-202ENST00000417344 C22orf23Q9BZE7 217 aa7.96□□□□□ -1.13
CCNT1-202ENST00000417344 PANK3Q9H999 370 aa7.96□□□□□ -1.13
CCNT1-202ENST00000417344 RTEL1-TNFRSF6BF6WH68 1400 aa7.96□□□□□ -1.14
CCNT1-202ENST00000417344 KIF14Q15058 1648 aa7.96□□□□□ -1.14
CCNT1-202ENST00000417344 EVI5O60447 810 aa7.96□□□□□ -1.14
CCNT1-202ENST00000417344 RAB3GAP1Q15042 981 aa7.96□□□□□ -1.14
CCNT1-202ENST00000417344 MYRIPQ8NFW9 859 aa7.96□□□□□ -1.14
CCNT1-202ENST00000417344 PCDHGA4Q9Y5G9 962 aa7.96□□□□□ -1.14
CCNT1-202ENST00000417344 CGNL1Q0VF96 1302 aa7.96□□□□□ -1.14
CCNT1-202ENST00000417344 DNTTIP2Q5QJE6 756 aaKnown RBP7.95□□□□□ -1.14
CCNT1-202ENST00000417344 CLUAP1Q96AJ1 413 aa7.95□□□□□ -1.14
CCNT1-202ENST00000417344 CGNQ9P2M7 1197 aaKnown RBP7.95□□□□□ -1.14
CCNT1-202ENST00000417344 CTTNBP2Q8WZ74 1663 aa7.95□□□□□ -1.14
CCNT1-202ENST00000417344 EFCAB5A4FU69 1503 aa7.95□□□□□ -1.14
CCNT1-202ENST00000417344 E9PCH4 1651 aa7.95□□□□□ -1.14
CCNT1-202ENST00000417344 TCOF1Q13428 1488 aaKnown RBP7.95□□□□□ -1.14
CCNT1-202ENST00000417344 PLEKHH1Q9ULM0 1364 aa7.95□□□□□ -1.14
CCNT1-202ENST00000417344 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
CCNT1-202ENST00000417344 ATP2B3Q16720 1220 aa7.95□□□□□ -1.14
CCNT1-202ENST00000417344 ZNF710Q8N1W2 664 aa7.95□□□□□ -1.14
CCNT1-202ENST00000417344 ZNF521Q96K83 1311 aa7.94□□□□□ -1.14
CCNT1-202ENST00000417344 ZNF445P59923 1031 aa7.94□□□□□ -1.14
CCNT1-202ENST00000417344 KLHL40Q2TBA0 621 aa7.94□□□□□ -1.14
CCNT1-202ENST00000417344 SMC5Q8IY18 1101 aa7.94□□□□□ -1.14
CCNT1-202ENST00000417344 CARD11Q9BXL7 1154 aa7.94□□□□□ -1.14
CCNT1-202ENST00000417344 CFTRP13569 1480 aa7.94□□□□□ -1.14
CCNT1-202ENST00000417344 GOLGA6L22H0YM25 854 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 OTUD5Q96G74 571 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 SNAPC4Q5SXM2 1469 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 RALGAPBQ86X10 1494 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 ATAD2BQ9ULI0 1458 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 ST20-MTHFSA0A0A6YYL1 179 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 GTF2F1P35269 517 aaKnown RBP eCLIP7.93□□□□□ -1.14
CCNT1-202ENST00000417344 RBM25P49756 843 aaKnown RBP7.93□□□□□ -1.14
CCNT1-202ENST00000417344 MFAP1P55081 439 aaKnown RBP7.93□□□□□ -1.14
CCNT1-202ENST00000417344 SLFN5Q08AF3 891 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 PDE3AQ14432 1141 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 PRIMPOLQ96LW4 560 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 CCDC39Q9UFE4 941 aa7.93□□□□□ -1.14
CCNT1-202ENST00000417344 ZNF608Q9ULD9 1512 aaPredicted RBP7.92□□□□□ -1.14
CCNT1-202ENST00000417344 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
CCNT1-202ENST00000417344 BCAR3O75815 825 aa7.92□□□□□ -1.14
CCNT1-202ENST00000417344 HSP90AB1P08238 724 aaKnown RBP7.92□□□□□ -1.14
CCNT1-202ENST00000417344 MLLT3P42568 568 aaPredicted RBP7.92□□□□□ -1.14
CCNT1-202ENST00000417344 SUPT6HQ7KZ85 1726 aaKnown RBP7.92□□□□□ -1.14
CCNT1-202ENST00000417344 TEX2Q8IWB9 1127 aa7.92□□□□□ -1.14
CCNT1-202ENST00000417344 PMFBP1Q8TBY8 1022 aa7.92□□□□□ -1.14
CCNT1-202ENST00000417344 SNX21Q969T3 373 aa7.92□□□□□ -1.14
CCNT1-202ENST00000417344 ADAMTS8Q9UP79 889 aa7.92□□□□□ -1.14
CCNT1-202ENST00000417344 DDX49Q9Y6V7 483 aaKnown RBP7.92□□□□□ -1.14
CCNT1-202ENST00000417344 UGGT2Q9NYU1 1516 aa7.92□□□□□ -1.14
CCNT1-202ENST00000417344 HMGN5P82970 282 aaKnown RBP7.91□□□□□ -1.14
CCNT1-202ENST00000417344 SLC20A2Q08357 652 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 NBPF1Q3BBV0 1214 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 EHBP1L1Q8N3D4 1523 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 NINLQ9Y2I6 1382 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 UHRF1BP1Q6BDS2 1440 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 KDM4FA0A1W2PPD8 638 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 KIAA2012Q0VF49 1180 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 ZNF771Q7L3S4 317 aaPredicted RBP7.91□□□□□ -1.14
CCNT1-202ENST00000417344 TRMT2AQ8IZ69 625 aaKnown RBP7.91□□□□□ -1.14
CCNT1-202ENST00000417344 JARID2Q92833 1246 aaPredicted RBP7.91□□□□□ -1.14
CCNT1-202ENST00000417344 RBSNQ9H1K0 784 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 PDZRN3Q9UPQ7 1066 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 NKTRP30414 1462 aaKnown RBP7.91□□□□□ -1.14
CCNT1-202ENST00000417344 ARHGEF11O15085 1522 aa7.91□□□□□ -1.14
CCNT1-202ENST00000417344 CC2D1BQ5T0F9 858 aaKnown RBP7.9□□□□□ -1.14
CCNT1-202ENST00000417344 CLEC17AQ6ZS10 378 aa7.9□□□□□ -1.14
CCNT1-202ENST00000417344 TSC1Q92574 1164 aa7.9□□□□□ -1.14
CCNT1-202ENST00000417344 IRX3P78415 501 aaPredicted RBP7.9□□□□□ -1.15
CCNT1-202ENST00000417344 ZSCAN23Q3MJ62 389 aa7.9□□□□□ -1.15
CCNT1-202ENST00000417344 DNAJC2Q99543 621 aaKnown RBP7.9□□□□□ -1.15
CCNT1-202ENST00000417344 EPAS1Q99814 870 aa7.9□□□□□ -1.15
CCNT1-202ENST00000417344 COG6Q9Y2V7 657 aa7.9□□□□□ -1.15
CCNT1-202ENST00000417344 KIF3AQ9Y496 699 aa7.9□□□□□ -1.15
CCNT1-202ENST00000417344 KIF21AQ7Z4S6 1674 aa7.89□□□□□ -1.15
CCNT1-202ENST00000417344 ANKRD30AQ9BXX3 1397 aa7.89□□□□□ -1.15
CCNT1-202ENST00000417344 GAPVD1Q14C86 1478 aa7.89□□□□□ -1.15
CCNT1-202ENST00000417344 IGSF3O75054 1194 aa7.89□□□□□ -1.15
CCNT1-202ENST00000417344 PHF14O94880 888 aa7.89□□□□□ -1.15
CCNT1-202ENST00000417344 GPR153Q6NV75 609 aa7.89□□□□□ -1.15
CCNT1-202ENST00000417344 PDCL2Q8N4E4 241 aa7.89□□□□□ -1.15
CCNT1-202ENST00000417344 ARHGAP31Q2M1Z3 1444 aa7.89□□□□□ -1.15
CCNT1-202ENST00000417344 EPRSP07814 1512 aaKnown RBP7.89□□□□□ -1.15
CCNT1-202ENST00000417344 WDR43Q15061 677 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCNT1-202ENST00000417344 PANK1Q8TE04 598 aa7.88□□□□□ -1.15
CCNT1-202ENST00000417344 JPH4Q96JJ6 628 aa7.88□□□□□ -1.15
CCNT1-202ENST00000417344 ROCK1Q13464 1354 aa7.88□□□□□ -1.15
CCNT1-202ENST00000417344 CLASP1Q7Z460 1538 aa7.88□□□□□ -1.15
CCNT1-202ENST00000417344 PSDA5PKW4 1024 aaPredicted RBP7.88□□□□□ -1.15
CCNT1-202ENST00000417344 GRXCR2A6NFK2 248 aa7.88□□□□□ -1.15
CCNT1-202ENST00000417344 KCNJ4P48050 445 aa7.88□□□□□ -1.15
CCNT1-202ENST00000417344 PRIM1P49642 420 aaKnown RBP7.88□□□□□ -1.15
CCNT1-202ENST00000417344 CAVIN1Q6NZI2 390 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms